RNA–Protein interactions for RNA: ENST00000491718.5

TNRC6A-207, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 7,956 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-207ENST00000491718 TNNT2P45379 298 aaPredicted RBP8.65□□□□□ -1.03
TNRC6A-207ENST00000491718 SLC24A1O60721 1099 aa8.65□□□□□ -1.03
TNRC6A-207ENST00000491718 MS4A1P11836 297 aa8.64□□□□□ -1.03
TNRC6A-207ENST00000491718 ISY1Q9ULR0 285 aaKnown RBP8.64□□□□□ -1.03
TNRC6A-207ENST00000491718 BECN1Q14457 450 aa8.63□□□□□ -1.03
TNRC6A-207ENST00000491718 NBR1Q14596 966 aa8.63□□□□□ -1.03
TNRC6A-207ENST00000491718 C11orf95C9JLR9 678 aaPredicted RBP8.62□□□□□ -1.03
TNRC6A-207ENST00000491718 MTERF4Q7Z6M4 381 aaKnown RBP8.61□□□□□ -1.03
TNRC6A-207ENST00000491718 UPF2Q9HAU5 1272 aaKnown RBP8.61□□□□□ -1.03
TNRC6A-207ENST00000491718 MAP7D2Q96T17 732 aa8.61□□□□□ -1.03
TNRC6A-207ENST00000491718 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.6□□□□□ -1.03
TNRC6A-207ENST00000491718 MRS2Q9HD23 443 aa8.6□□□□□ -1.03
TNRC6A-207ENST00000491718 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
TNRC6A-207ENST00000491718 CCNB3Q8WWL7 1395 aa8.59□□□□□ -1.04
TNRC6A-207ENST00000491718 NPM2Q86SE8 214 aaKnown RBP8.58□□□□□ -1.04
TNRC6A-207ENST00000491718 FHAD1B1AJZ9 1412 aa8.57□□□□□ -1.04
TNRC6A-207ENST00000491718 POLR3GLQ9BT43 218 aa8.57□□□□□ -1.04
TNRC6A-207ENST00000491718 KTN1Q86UP2 1357 aaKnown RBP8.57□□□□□ -1.04
TNRC6A-207ENST00000491718 DHX57Q6P158 1386 aaKnown RBP8.56□□□□□ -1.04
TNRC6A-207ENST00000491718 KIF21BO75037 1637 aa8.56□□□□□ -1.04
TNRC6A-207ENST00000491718 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
TNRC6A-207ENST00000491718 FAM43AQ8N2R8 423 aa8.56□□□□□ -1.04
TNRC6A-207ENST00000491718 PDE3BQ13370 1112 aa8.56□□□□□ -1.04
TNRC6A-207ENST00000491718 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
TNRC6A-207ENST00000491718 ROCK2O75116 1388 aaKnown RBP8.55□□□□□ -1.04
TNRC6A-207ENST00000491718 SLC4A1APQ9BWU0 796 aaKnown RBP8.55□□□□□ -1.04
TNRC6A-207ENST00000491718 PHLDB1Q86UU1 1377 aa8.54□□□□□ -1.04
TNRC6A-207ENST00000491718 RRP9O43818 475 aaKnown RBP8.54□□□□□ -1.04
TNRC6A-207ENST00000491718 FAM9BQ8IZU0 186 aa8.54□□□□□ -1.04
TNRC6A-207ENST00000491718 SETD5Q9C0A6 1442 aa8.54□□□□□ -1.04
TNRC6A-207ENST00000491718 CUX2O14529 1486 aa8.54□□□□□ -1.04
TNRC6A-207ENST00000491718 HSP90AA1P07900 732 aaKnown RBP8.53□□□□□ -1.04
TNRC6A-207ENST00000491718 TOP2AP11388 1531 aaKnown RBP8.52□□□□□ -1.05
TNRC6A-207ENST00000491718 AAMPQ13685 434 aa8.52□□□□□ -1.05
TNRC6A-207ENST00000491718 GSE1Q14687 1217 aa8.52□□□□□ -1.05
TNRC6A-207ENST00000491718 PNNQ9H307 717 aaKnown RBP8.52□□□□□ -1.05
TNRC6A-207ENST00000491718 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.52□□□□□ -1.054e-6■□□□□ 11.2
TNRC6A-207ENST00000491718 CFAP44Q96MT7 982 aa8.51□□□□□ -1.05
TNRC6A-207ENST00000491718 RRBP1Q9P2E9 1410 aaKnown RBP8.51□□□□□ -1.05
TNRC6A-207ENST00000491718 PKNOX2Q96KN3 472 aa8.51□□□□□ -1.05
TNRC6A-207ENST00000491718 MAP3K1Q13233 1512 aa8.5□□□□□ -1.05
TNRC6A-207ENST00000491718 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
TNRC6A-207ENST00000491718 IRX6P78412 446 aaPredicted RBP8.5□□□□□ -1.05
TNRC6A-207ENST00000491718 SCRIBQ14160 1630 aa8.49□□□□□ -1.05
TNRC6A-207ENST00000491718 NGEFQ8N5V2 710 aa8.49□□□□□ -1.05
TNRC6A-207ENST00000491718 CCDC18Q5T9S5 1454 aa8.48□□□□□ -1.05
TNRC6A-207ENST00000491718 GOLGA6L22H0YM25 854 aa8.47□□□□□ -1.05
TNRC6A-207ENST00000491718 TPM2P07951 284 aa8.47□□□□□ -1.05
TNRC6A-207ENST00000491718 HSP90AA2PQ14568 343 aaPredicted RBP8.47□□□□□ -1.05
TNRC6A-207ENST00000491718 PPP1R15AO75807 674 aaPredicted RBP8.47□□□□□ -1.05
TNRC6A-207ENST00000491718 SOGA1O94964 1423 aa8.47□□□□□ -1.05
TNRC6A-207ENST00000491718 TMC1Q8TDI8 760 aa8.47□□□□□ -1.05
TNRC6A-207ENST00000491718 LAS1LQ9Y4W2 734 aaKnown RBP8.46□□□□□ -1.05
TNRC6A-207ENST00000491718 KIF27Q86VH2 1401 aa8.45□□□□□ -1.06
TNRC6A-207ENST00000491718 TAF3Q5VWG9 929 aa8.44□□□□□ -1.06
TNRC6A-207ENST00000491718 NUDCQ9Y266 331 aa8.44□□□□□ -1.06
TNRC6A-207ENST00000491718 EIF3AQ14152 1382 aaKnown RBP8.44□□□□□ -1.06
TNRC6A-207ENST00000491718 CDK11BP21127 795 aaKnown RBP8.43□□□□□ -1.06
TNRC6A-207ENST00000491718 CANXP27824 592 aaKnown RBP8.43□□□□□ -1.06
TNRC6A-207ENST00000491718 B4GALNT3Q6L9W6 998 aa8.43□□□□□ -1.06
TNRC6A-207ENST00000491718 RAB3GAP2Q9H2M9 1393 aa8.41□□□□□ -1.06
TNRC6A-207ENST00000491718 SKOR2Q2VWA4 1001 aaPredicted RBP8.41□□□□□ -1.06
TNRC6A-207ENST00000491718 WASHC2AQ641Q2 1341 aa8.41□□□□□ -1.06
TNRC6A-207ENST00000491718 CHMP4BQ9H444 224 aaKnown RBP8.4□□□□□ -1.06
TNRC6A-207ENST00000491718 WASHC2CQ9Y4E1 1318 aa8.4□□□□□ -1.06
TNRC6A-207ENST00000491718 RTN4Q9NQC3 1192 aaKnown RBP8.4□□□□□ -1.06
TNRC6A-207ENST00000491718 CNGB1Q14028 1251 aaPredicted RBP8.4□□□□□ -1.07
TNRC6A-207ENST00000491718 SMG6Q86US8 1419 aaKnown RBP8.4□□□□□ -1.07
TNRC6A-207ENST00000491718 SMARCA2P51531 1590 aa8.4□□□□□ -1.07
TNRC6A-207ENST00000491718 RALBP1Q15311 655 aa8.4□□□□□ -1.07
TNRC6A-207ENST00000491718 SIN3AQ96ST3 1273 aa8.4□□□□□ -1.07
TNRC6A-207ENST00000491718 CCDC88BA6NC98 1476 aa8.39□□□□□ -1.07
TNRC6A-207ENST00000491718 MTUS2Q5JR59 1369 aa8.39□□□□□ -1.07
TNRC6A-207ENST00000491718 NAP1L5Q96NT1 182 aaPredicted RBP8.39□□□□□ -1.07
TNRC6A-207ENST00000491718 FMN1Q68DA7 1419 aa8.38□□□□□ -1.07
TNRC6A-207ENST00000491718 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
TNRC6A-207ENST00000491718 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
TNRC6A-207ENST00000491718 DDX11L8A8MPP1 907 aa8.38□□□□□ -1.07
TNRC6A-207ENST00000491718 INSRP06213 1382 aa8.37□□□□□ -1.07
TNRC6A-207ENST00000491718 CECR2Q9BXF3 1484 aa8.37□□□□□ -1.07
TNRC6A-207ENST00000491718 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.37□□□□□ -1.07
TNRC6A-207ENST00000491718 MAPK8IP3Q9UPT6 1336 aa8.37□□□□□ -1.07
TNRC6A-207ENST00000491718 GOLGA6L3A6NEY3 463 aa8.37□□□□□ -1.07
TNRC6A-207ENST00000491718 TERF1P54274 439 aa8.37□□□□□ -1.07
TNRC6A-207ENST00000491718 IL27Q8NEV9 243 aa8.37□□□□□ -1.07
TNRC6A-207ENST00000491718 NINLQ9Y2I6 1382 aa8.37□□□□□ -1.07
TNRC6A-207ENST00000491718 ARHGAP35Q9NRY4 1499 aa8.37□□□□□ -1.07
TNRC6A-207ENST00000491718 CNTLNQ9NXG0 1405 aa8.36□□□□□ -1.07
TNRC6A-207ENST00000491718 HSPA5P11021 654 aaKnown RBP8.36□□□□□ -1.07
TNRC6A-207ENST00000491718 PLEKHH2Q8IVE3 1493 aa8.35□□□□□ -1.07
TNRC6A-207ENST00000491718 GBP4Q96PP9 640 aa8.34□□□□□ -1.07
TNRC6A-207ENST00000491718 HIRIP3Q9BW71 556 aaPredicted RBP8.34□□□□□ -1.07
TNRC6A-207ENST00000491718 CENPQQ7L2Z9 268 aaPredicted RBP8.34□□□□□ -1.07
TNRC6A-207ENST00000491718 MRE11P49959 708 aa8.34□□□□□ -1.07
TNRC6A-207ENST00000491718 UACAQ9BZF9 1416 aa8.34□□□□□ -1.07
TNRC6A-207ENST00000491718 CDCA8Q53HL2 280 aa8.33□□□□□ -1.08
TNRC6A-207ENST00000491718 MROH2BQ7Z745 1585 aa8.33□□□□□ -1.08
TNRC6A-207ENST00000491718 MSNP26038 577 aaKnown RBP8.33□□□□□ -1.08
TNRC6A-207ENST00000491718 WDR43Q15061 677 aaKnown RBP eCLIP8.33□□□□□ -1.08
TNRC6A-207ENST00000491718 MYH16Q9H6N6 1097 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms