RNA–Protein interactions for RNA: ENST00000481788.1

RBM28-205, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-205ENST00000481788 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
RBM28-205ENST00000481788 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
RBM28-205ENST00000481788 PITPNM1O00562 1244 aa13.28□□□□□ -0.28
RBM28-205ENST00000481788 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
RBM28-205ENST00000481788 CFTRP13569 1480 aa13.24□□□□□ -0.29
RBM28-205ENST00000481788 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
RBM28-205ENST00000481788 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
RBM28-205ENST00000481788 RIMBP3CA6NJZ7 1639 aa13.2□□□□□ -0.3
RBM28-205ENST00000481788 RIMBP3BA6NNM3 1639 aa13.2□□□□□ -0.3
RBM28-205ENST00000481788 RIMBP3Q9UFD9 1639 aa13.2□□□□□ -0.3
RBM28-205ENST00000481788 WIZO95785 1651 aa13.19□□□□□ -0.3
RBM28-205ENST00000481788 POTEHQ6S545 545 aa13.18□□□□□ -0.3
RBM28-205ENST00000481788 ARHGEF11O15085 1522 aa13.15□□□□□ -0.3
RBM28-205ENST00000481788 FKBP8Q14318 412 aa13.15□□□□□ -0.3
RBM28-205ENST00000481788 STAG3Q9UJ98 1225 aa13.14□□□□□ -0.31
RBM28-205ENST00000481788 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
RBM28-205ENST00000481788 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
RBM28-205ENST00000481788 FXR2P51116 673 aaKnown RBP eCLIP13.08□□□□□ -0.32
RBM28-205ENST00000481788 PROM2Q8N271 834 aa13.08□□□□□ -0.32
RBM28-205ENST00000481788 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
RBM28-205ENST00000481788 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
RBM28-205ENST00000481788 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
RBM28-205ENST00000481788 CYB5RLQ6IPT4 315 aa13.04□□□□□ -0.32
RBM28-205ENST00000481788 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
RBM28-205ENST00000481788 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
RBM28-205ENST00000481788 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
RBM28-205ENST00000481788 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
RBM28-205ENST00000481788 EIF4G3O43432 1585 aaKnown RBP12.96□□□□□ -0.33
RBM28-205ENST00000481788 AQRO60306 1485 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■■■■□ 24.7
RBM28-205ENST00000481788 CCDC88BA6NC98 1476 aa12.92□□□□□ -0.34
RBM28-205ENST00000481788 TARBP1Q13395 1621 aaKnown RBP12.91□□□□□ -0.34
RBM28-205ENST00000481788 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
RBM28-205ENST00000481788 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
RBM28-205ENST00000481788 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
RBM28-205ENST00000481788 CHD1O14646 1710 aa12.88□□□□□ -0.35
RBM28-205ENST00000481788 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
RBM28-205ENST00000481788 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
RBM28-205ENST00000481788 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
RBM28-205ENST00000481788 CLASP1Q7Z460 1538 aa12.84□□□□□ -0.35
RBM28-205ENST00000481788 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
RBM28-205ENST00000481788 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
RBM28-205ENST00000481788 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
RBM28-205ENST00000481788 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
RBM28-205ENST00000481788 HAX1O00165 279 aa12.77□□□□□ -0.37
RBM28-205ENST00000481788 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
RBM28-205ENST00000481788 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.37
RBM28-205ENST00000481788 SOGA1O94964 1423 aa12.74□□□□□ -0.37
RBM28-205ENST00000481788 MIER1Q8N108 512 aa12.73□□□□□ -0.37
RBM28-205ENST00000481788 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
RBM28-205ENST00000481788 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.37
RBM28-205ENST00000481788 WDR97A6NE52 1622 aa12.7□□□□□ -0.38
RBM28-205ENST00000481788 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
RBM28-205ENST00000481788 NPM1P06748 294 aaKnown RBP eCLIP12.7□□□□□ -0.38
RBM28-205ENST00000481788 GAPVD1Q14C86 1478 aa12.7□□□□□ -0.38
RBM28-205ENST00000481788 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
RBM28-205ENST00000481788 SYNJ2O15056 1496 aa12.69□□□□□ -0.38
RBM28-205ENST00000481788 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
RBM28-205ENST00000481788 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
RBM28-205ENST00000481788 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
RBM28-205ENST00000481788 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
RBM28-205ENST00000481788 CUX1P39880 1505 aa12.64□□□□□ -0.39
RBM28-205ENST00000481788 ERCC6L2Q5T890 1561 aa12.62□□□□□ -0.39
RBM28-205ENST00000481788 MNX1P50219 401 aaPredicted RBP12.61□□□□□ -0.39
RBM28-205ENST00000481788 CD44P16070 742 aaKnown RBP12.6□□□□□ -0.39
RBM28-205ENST00000481788 VASPP50552 380 aaPredicted RBP12.6□□□□□ -0.39
RBM28-205ENST00000481788 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
RBM28-205ENST00000481788 SP7Q8TDD2 431 aaPredicted RBP12.57□□□□□ -0.4
RBM28-205ENST00000481788 NUP160Q12769 1436 aa12.55□□□□□ -0.4
RBM28-205ENST00000481788 ABCA10Q8WWZ4 1543 aa12.55□□□□□ -0.4
RBM28-205ENST00000481788 ABCA5Q8WWZ7 1642 aa12.54□□□□□ -0.4
RBM28-205ENST00000481788 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
RBM28-205ENST00000481788 CEP170Q5SW79 1584 aa12.52□□□□□ -0.4
RBM28-205ENST00000481788 EVX2Q03828 476 aa12.51□□□□□ -0.41
RBM28-205ENST00000481788 PBRM1Q86U86 1689 aa12.51□□□□□ -0.41
RBM28-205ENST00000481788 SHROOM2Q13796 1616 aa12.5□□□□□ -0.41
RBM28-205ENST00000481788 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
RBM28-205ENST00000481788 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
RBM28-205ENST00000481788 KDM4FA0A1W2PPD8 638 aa12.46□□□□□ -0.41
RBM28-205ENST00000481788 ADAMTS12P58397 1594 aa12.46□□□□□ -0.42
RBM28-205ENST00000481788 KIF13AQ9H1H9 1805 aa12.46□□□□□ -0.42
RBM28-205ENST00000481788 CLCN6P51797 869 aa12.44□□□□□ -0.42
RBM28-205ENST00000481788 ABCC10Q5T3U5 1492 aa12.43□□□□□ -0.42
RBM28-205ENST00000481788 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
RBM28-205ENST00000481788 FHAD1B1AJZ9 1412 aa12.42□□□□□ -0.42
RBM28-205ENST00000481788 ILDR1Q86SU0 546 aaPredicted RBP12.41□□□□□ -0.42
RBM28-205ENST00000481788 PRG4Q92954 1404 aaPredicted RBP12.4□□□□□ -0.42
RBM28-205ENST00000481788 TSPYL2Q9H2G4 693 aaPredicted RBP12.4□□□□□ -0.42
RBM28-205ENST00000481788 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
RBM28-205ENST00000481788 MAPKBP1O60336 1514 aa12.38□□□□□ -0.43
RBM28-205ENST00000481788 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
RBM28-205ENST00000481788 FAM212AQ96EL1 285 aa12.38□□□□□ -0.43
RBM28-205ENST00000481788 NUBP1P53384 320 aa12.37□□□□□ -0.43
RBM28-205ENST00000481788 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
RBM28-205ENST00000481788 DIP2BQ9P265 1576 aa12.36□□□□□ -0.43
RBM28-205ENST00000481788 JPH4Q96JJ6 628 aa12.36□□□□□ -0.43
RBM28-205ENST00000481788 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
RBM28-205ENST00000481788 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
RBM28-205ENST00000481788 GABBR2O75899 941 aa12.34□□□□□ -0.43
RBM28-205ENST00000481788 SPOCK2Q92563 424 aa12.32□□□□□ -0.44
RBM28-205ENST00000481788 ADCY10Q96PN6 1610 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms