RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.77
ABCA2-217ENST00000479446 RRP7BPQ9NSQ0 103 aa26.07■■□□□ 1.76
ABCA2-217ENST00000479446 RSF1Q96T23 1441 aaPredicted RBP26.05■■□□□ 1.76
ABCA2-217ENST00000479446 GLIPR1L2Q4G1C9 344 aa25.97■■□□□ 1.75
ABCA2-217ENST00000479446 CHMP7Q8WUX9 453 aaPredicted RBP25.96■■□□□ 1.75
ABCA2-217ENST00000479446 TNIKQ9UKE5 1360 aa25.95■■□□□ 1.74
ABCA2-217ENST00000479446 ARXQ96QS3 562 aa25.92■■□□□ 1.74
ABCA2-217ENST00000479446 DDRGK1Q96HY6 314 aa25.92■■□□□ 1.74
ABCA2-217ENST00000479446 MYH16Q9H6N6 1097 aa25.92■■□□□ 1.74
ABCA2-217ENST00000479446 WRNQ14191 1432 aaPredicted RBP eCLIP25.92■■□□□ 1.74
ABCA2-217ENST00000479446 BECN1Q14457 450 aa25.87■■□□□ 1.73
ABCA2-217ENST00000479446 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
ABCA2-217ENST00000479446 PLPPR3Q6T4P5 718 aa25.83■■□□□ 1.73
ABCA2-217ENST00000479446 PLEKHD1A6NEE1 506 aa25.83■■□□□ 1.73
ABCA2-217ENST00000479446 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.73
ABCA2-217ENST00000479446 KIF27Q86VH2 1401 aa25.79■■□□□ 1.72
ABCA2-217ENST00000479446 RGL3Q3MIN7 710 aa25.78■■□□□ 1.72
ABCA2-217ENST00000479446 CDCA8Q53HL2 280 aa25.77■■□□□ 1.72
ABCA2-217ENST00000479446 ANP32EQ9BTT0 268 aa25.77■■□□□ 1.72
ABCA2-217ENST00000479446 RB1CC1Q8TDY2 1594 aa25.76■■□□□ 1.71
ABCA2-217ENST00000479446 KNSTRNQ9Y448 316 aa25.73■■□□□ 1.71
ABCA2-217ENST00000479446 CFDP1Q9UEE9 299 aaPredicted RBP25.73■■□□□ 1.71
ABCA2-217ENST00000479446 CARD11Q9BXL7 1154 aa25.73■■□□□ 1.71
ABCA2-217ENST00000479446 CFAP53Q96M91 514 aa25.72■■□□□ 1.71
ABCA2-217ENST00000479446 PPP4R2Q9NY27 417 aa25.7■■□□□ 1.7
ABCA2-217ENST00000479446 KCNH8Q96L42 1107 aa25.69■■□□□ 1.7
ABCA2-217ENST00000479446 SIN3AQ96ST3 1273 aa25.69■■□□□ 1.7
ABCA2-217ENST00000479446 GOLGA6L22H0YM25 854 aa25.67■■□□□ 1.7
ABCA2-217ENST00000479446 SENP3-EIF4A1A0A087X0R7 540 aa25.65■■□□□ 1.7
ABCA2-217ENST00000479446 PPM1GO15355 546 aaPredicted RBP25.65■■□□□ 1.7
ABCA2-217ENST00000479446 BAZ1BQ9UIG0 1483 aaKnown RBP25.65■■□□□ 1.7
ABCA2-217ENST00000479446 TRIM44Q96DX7 344 aaPredicted RBP25.64■■□□□ 1.69
ABCA2-217ENST00000479446 NCLP19338 710 aaKnown RBP25.62■■□□□ 1.69
ABCA2-217ENST00000479446 PPP1R15AO75807 674 aaPredicted RBP25.61■■□□□ 1.69
ABCA2-217ENST00000479446 CCNB3Q8WWL7 1395 aa25.58■■□□□ 1.69
ABCA2-217ENST00000479446 TIMELESSQ9UNS1 1208 aa25.56■■□□□ 1.68
ABCA2-217ENST00000479446 FTSJ3Q8IY81 847 aaKnown RBP25.56■■□□□ 1.68
ABCA2-217ENST00000479446 NACADO15069 1562 aa25.54■■□□□ 1.68
ABCA2-217ENST00000479446 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
ABCA2-217ENST00000479446 FHAD1B1AJZ9 1412 aa25.5■■□□□ 1.67
ABCA2-217ENST00000479446 NEUROD2Q15784 382 aa25.49■■□□□ 1.67
ABCA2-217ENST00000479446 NOP58Q9Y2X3 529 aaKnown RBP25.48■■□□□ 1.67
ABCA2-217ENST00000479446 CASC1Q6TDU7 716 aa25.48■■□□□ 1.67
ABCA2-217ENST00000479446 C14orf37Q86TY3 774 aa25.47■■□□□ 1.67
ABCA2-217ENST00000479446 MAPK8IP3Q9UPT6 1336 aa25.47■■□□□ 1.67
ABCA2-217ENST00000479446 NUDCQ9Y266 331 aa25.47■■□□□ 1.67
ABCA2-217ENST00000479446 RGS3P49796 1198 aa25.46■■□□□ 1.67
ABCA2-217ENST00000479446 CCER2I3L3R5 266 aa25.46■■□□□ 1.67
ABCA2-217ENST00000479446 ZBTB7CA1YPR0 619 aa25.45■■□□□ 1.66
ABCA2-217ENST00000479446 BAZ1AQ9NRL2 1556 aaPredicted RBP25.44■■□□□ 1.66
ABCA2-217ENST00000479446 ERICH6BQ5W0A0 696 aa25.44■■□□□ 1.66
ABCA2-217ENST00000479446 LAS1LQ9Y4W2 734 aaKnown RBP25.44■■□□□ 1.66
ABCA2-217ENST00000479446 B4GALNT3Q6L9W6 998 aa25.43■■□□□ 1.66
ABCA2-217ENST00000479446 FRAT1Q92837 279 aaPredicted RBP25.4■■□□□ 1.66
ABCA2-217ENST00000479446 CC2D1BQ5T0F9 858 aaKnown RBP25.39■■□□□ 1.66
ABCA2-217ENST00000479446 PTMAP06454 111 aaKnown RBP25.38■■□□□ 1.65
ABCA2-217ENST00000479446 MS4A1P11836 297 aa25.38■■□□□ 1.65
ABCA2-217ENST00000479446 CHMP4BQ9H444 224 aaKnown RBP25.38■■□□□ 1.65
ABCA2-217ENST00000479446 SOGA1O94964 1423 aa25.37■■□□□ 1.65
ABCA2-217ENST00000479446 TMF1P82094 1093 aa25.35■■□□□ 1.65
ABCA2-217ENST00000479446 PLEKHG5O94827 1062 aa25.34■■□□□ 1.65
ABCA2-217ENST00000479446 CARMIL1Q5VZK9 1371 aa25.34■■□□□ 1.65
ABCA2-217ENST00000479446 SETD5Q9C0A6 1442 aa25.34■■□□□ 1.65
ABCA2-217ENST00000479446 VPS8Q8N3P4 1428 aa25.33■■□□□ 1.64
ABCA2-217ENST00000479446 A0A0G2JS52 829 aa25.33■■□□□ 1.64
ABCA2-217ENST00000479446 DCAF11Q8TEB1 546 aa25.32■■□□□ 1.64
ABCA2-217ENST00000479446 CDK11BP21127 795 aaKnown RBP25.32■■□□□ 1.64
ABCA2-217ENST00000479446 POGKQ9P215 609 aa25.31■■□□□ 1.64
ABCA2-217ENST00000479446 ZRSR1Q15695 479 aaKnown RBP25.31■■□□□ 1.64
ABCA2-217ENST00000479446 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
ABCA2-217ENST00000479446 TNNT2P45379 298 aaPredicted RBP25.3■■□□□ 1.64
ABCA2-217ENST00000479446 HSPA5P11021 654 aaKnown RBP25.27■■□□□ 1.64
ABCA2-217ENST00000479446 CUX2O14529 1486 aa25.25■■□□□ 1.63
ABCA2-217ENST00000479446 PNNQ9H307 717 aaKnown RBP25.25■■□□□ 1.63
ABCA2-217ENST00000479446 U2SURPO15042 1029 aaKnown RBP25.25■■□□□ 1.63
ABCA2-217ENST00000479446 DNTTIP2Q5QJE6 756 aaKnown RBP25.24■■□□□ 1.63
ABCA2-217ENST00000479446 HSP90AB1P08238 724 aaKnown RBP25.23■■□□□ 1.63
ABCA2-217ENST00000479446 RBM19Q9Y4C8 960 aaKnown RBP25.22■■□□□ 1.63
ABCA2-217ENST00000479446 ARHGAP35Q9NRY4 1499 aa25.2■■□□□ 1.62
ABCA2-217ENST00000479446 ARID4BQ4LE39 1312 aaPredicted RBP25.18■■□□□ 1.62
ABCA2-217ENST00000479446 NAP1L5Q96NT1 182 aaPredicted RBP25.18■■□□□ 1.62
ABCA2-217ENST00000479446 KANK4Q5T7N3 995 aaPredicted RBP25.17■■□□□ 1.62
ABCA2-217ENST00000479446 TPRNQ4KMQ1 711 aa25.17■■□□□ 1.62
ABCA2-217ENST00000479446 RTN4Q9NQC3 1192 aaKnown RBP25.17■■□□□ 1.62
ABCA2-217ENST00000479446 KANK1Q14678 1352 aa25.14■■□□□ 1.61
ABCA2-217ENST00000479446 HSCBQ8IWL3 235 aa25.14■■□□□ 1.61
ABCA2-217ENST00000479446 EIF4G1Q04637 1599 aaKnown RBP25.12■■□□□ 1.61
ABCA2-217ENST00000479446 KTN1Q86UP2 1357 aaKnown RBP25.12■■□□□ 1.61
ABCA2-217ENST00000479446 MORC1Q86VD1 984 aa25.11■■□□□ 1.61
ABCA2-217ENST00000479446 PKD2Q13563 968 aa25.11■■□□□ 1.61
ABCA2-217ENST00000479446 HAP1P54257 671 aaPredicted RBP25.11■■□□□ 1.61
ABCA2-217ENST00000479446 RAB3GAP2Q9H2M9 1393 aa25.1■■□□□ 1.61
ABCA2-217ENST00000479446 OS9Q13438 667 aaPredicted RBP25.09■■□□□ 1.61
ABCA2-217ENST00000479446 PLCB2Q00722 1185 aa25.08■■□□□ 1.61
ABCA2-217ENST00000479446 DEKP35659 375 aaKnown RBP25.07■■□□□ 1.6
ABCA2-217ENST00000479446 L1TD1Q5T7N2 865 aaKnown RBP25.05■■□□□ 1.6
ABCA2-217ENST00000479446 RALBP1Q15311 655 aa25.04■■□□□ 1.6
ABCA2-217ENST00000479446 RCAN3Q9UKA8 241 aa25.04■■□□□ 1.6
ABCA2-217ENST00000479446 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
ABCA2-217ENST00000479446 KCNJ4P48050 445 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms