RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 LOC105371045A0A1W2PR82 267 aa9.48□□□□□ -0.89
SPTLC3-205ENST00000476791 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
SPTLC3-205ENST00000476791 HRCP23327 699 aa9.45□□□□□ -0.9
SPTLC3-205ENST00000476791 HAX1O00165 279 aa9.45□□□□□ -0.9
SPTLC3-205ENST00000476791 FARP1Q9Y4F1 1045 aaPredicted RBP9.43□□□□□ -0.9
SPTLC3-205ENST00000476791 C14orf37Q86TY3 774 aa9.42□□□□□ -0.9
SPTLC3-205ENST00000476791 GTF3C3Q9Y5Q9 886 aa9.41□□□□□ -0.9
SPTLC3-205ENST00000476791 MIER1Q8N108 512 aa9.4□□□□□ -0.9
SPTLC3-205ENST00000476791 FBXO3Q9UK99 471 aa9.39□□□□□ -0.91
SPTLC3-205ENST00000476791 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
SPTLC3-205ENST00000476791 EVX2Q03828 476 aa9.36□□□□□ -0.91
SPTLC3-205ENST00000476791 PDE4CQ08493 712 aa9.36□□□□□ -0.91
SPTLC3-205ENST00000476791 BCANQ96GW7 911 aa9.36□□□□□ -0.91
SPTLC3-205ENST00000476791 MNX1P50219 401 aaPredicted RBP9.34□□□□□ -0.91
SPTLC3-205ENST00000476791 PKNOX2Q96KN3 472 aa9.34□□□□□ -0.91
SPTLC3-205ENST00000476791 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
SPTLC3-205ENST00000476791 ANO8Q9HCE9 1232 aaPredicted RBP9.33□□□□□ -0.92
SPTLC3-205ENST00000476791 C19orf67A6NJJ6 358 aa9.33□□□□□ -0.92
SPTLC3-205ENST00000476791 CHMP4AQ9BY43 222 aa9.33□□□□□ -0.92
SPTLC3-205ENST00000476791 TRIM26Q12899 539 aaPredicted RBP9.32□□□□□ -0.92
SPTLC3-205ENST00000476791 DHX37Q8IY37 1157 aaKnown RBP9.32□□□□□ -0.92
SPTLC3-205ENST00000476791 CD44P16070 742 aaKnown RBP9.3□□□□□ -0.92
SPTLC3-205ENST00000476791 NPM1P06748 294 aaKnown RBP eCLIP9.29□□□□□ -0.92
SPTLC3-205ENST00000476791 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
SPTLC3-205ENST00000476791 SP7Q8TDD2 431 aaPredicted RBP9.28□□□□□ -0.92
SPTLC3-205ENST00000476791 BCL11BQ9C0K0 894 aaPredicted RBP9.25□□□□□ -0.93
SPTLC3-205ENST00000476791 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
SPTLC3-205ENST00000476791 ZBTB47Q9UFB7 747 aaPredicted RBP9.22□□□□□ -0.93
SPTLC3-205ENST00000476791 CENPBP07199 599 aaPredicted RBP9.21□□□□□ -0.94
SPTLC3-205ENST00000476791 PAK3O75914 559 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-205ENST00000476791 TMEM132AQ24JP5 1023 aa9.2□□□□□ -0.94
SPTLC3-205ENST00000476791 TSPYL2Q9H2G4 693 aaPredicted RBP9.2□□□□□ -0.94
SPTLC3-205ENST00000476791 PLCB2Q00722 1185 aa9.18□□□□□ -0.94
SPTLC3-205ENST00000476791 RASEFQ8IZ41 740 aa9.18□□□□□ -0.94
SPTLC3-205ENST00000476791 NEFLP07196 543 aa9.17□□□□□ -0.94
SPTLC3-205ENST00000476791 IFNLR1Q8IU57 520 aaPredicted RBP9.16□□□□□ -0.94
SPTLC3-205ENST00000476791 SUPT5HO00267 1087 aaKnown RBP9.15□□□□□ -0.94
SPTLC3-205ENST00000476791 UBTFP17480 764 aaKnown RBP9.15□□□□□ -0.94
SPTLC3-205ENST00000476791 GABBR2O75899 941 aa9.14□□□□□ -0.95
SPTLC3-205ENST00000476791 NUBP1P53384 320 aa9.14□□□□□ -0.95
SPTLC3-205ENST00000476791 PHF12Q96QT6 1004 aa9.14□□□□□ -0.95
SPTLC3-205ENST00000476791 TAF7LQ5H9L4 462 aa9.13□□□□□ -0.95
SPTLC3-205ENST00000476791 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
SPTLC3-205ENST00000476791 FGD1P98174 961 aa9.12□□□□□ -0.95
SPTLC3-205ENST00000476791 BRD2P25440 801 aaKnown RBP9.09□□□□□ -0.95
SPTLC3-205ENST00000476791 CCDC61Q9Y6R9 512 aa9.09□□□□□ -0.95
SPTLC3-205ENST00000476791 FAM212AQ96EL1 285 aa9.09□□□□□ -0.95
SPTLC3-205ENST00000476791 DCAF8Q5TAQ9 597 aa9.07□□□□□ -0.96
SPTLC3-205ENST00000476791 CCDC136Q96JN2 1154 aa9.07□□□□□ -0.96
SPTLC3-205ENST00000476791 GALR2O43603 387 aaPredicted RBP9.06□□□□□ -0.96
SPTLC3-205ENST00000476791 SPOCK2Q92563 424 aa9.06□□□□□ -0.96
SPTLC3-205ENST00000476791 IGSF3O75054 1194 aa9.05□□□□□ -0.96
SPTLC3-205ENST00000476791 ANP32EQ9BTT0 268 aa9.04□□□□□ -0.96
SPTLC3-205ENST00000476791 CLCN6P51797 869 aa9.03□□□□□ -0.96
SPTLC3-205ENST00000476791 KIF12Q96FN5 646 aa9.02□□□□□ -0.97
SPTLC3-205ENST00000476791 MS4A3Q96HJ5 214 aa9.01□□□□□ -0.97
SPTLC3-205ENST00000476791 MAP3K13O43283 966 aa9□□□□□ -0.97
SPTLC3-205ENST00000476791 PYGBP11216 843 aa9□□□□□ -0.97
SPTLC3-205ENST00000476791 CIZ1Q9ULV3 898 aaPredicted RBP9□□□□□ -0.97
SPTLC3-205ENST00000476791 A0A0U1RQG5 324 aaPredicted RBP8.98□□□□□ -0.97
SPTLC3-205ENST00000476791 GSE1Q14687 1217 aa8.98□□□□□ -0.97
SPTLC3-205ENST00000476791 IRX6P78412 446 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-205ENST00000476791 DCBLD2Q96PD2 775 aa8.97□□□□□ -0.97
SPTLC3-205ENST00000476791 CDK11BP21127 795 aaKnown RBP8.97□□□□□ -0.97
SPTLC3-205ENST00000476791 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.97□□□□□ -0.97
SPTLC3-205ENST00000476791 CFAP44Q96MT7 982 aa8.97□□□□□ -0.97
SPTLC3-205ENST00000476791 CDK11AQ9UQ88 783 aaPredicted RBP8.97□□□□□ -0.97
SPTLC3-205ENST00000476791 PAXIP1Q6ZW49 1069 aaPredicted RBP8.96□□□□□ -0.97
SPTLC3-205ENST00000476791 SALL2Q9Y467 1007 aaPredicted RBP8.96□□□□□ -0.97
SPTLC3-205ENST00000476791 PCDHB13Q9Y5F0 798 aa8.96□□□□□ -0.98
SPTLC3-205ENST00000476791 POTEIP0CG38 1075 aa8.95□□□□□ -0.98
SPTLC3-205ENST00000476791 TRPC6Q9Y210 931 aa8.93□□□□□ -0.98
SPTLC3-205ENST00000476791 AAMPQ13685 434 aa8.92□□□□□ -0.98
SPTLC3-205ENST00000476791 KDM2AQ9Y2K7 1162 aa8.92□□□□□ -0.98
SPTLC3-205ENST00000476791 DCAF8L2P0C7V8 631 aa8.92□□□□□ -0.98
SPTLC3-205ENST00000476791 IFNL1Q8IU54 200 aa8.92□□□□□ -0.98
SPTLC3-205ENST00000476791 SGIP1Q9BQI5 828 aa8.89□□□□□ -0.99
SPTLC3-205ENST00000476791 PCDHB8Q9UN66 801 aa8.89□□□□□ -0.99
SPTLC3-205ENST00000476791 ZEB1P37275 1124 aaPredicted RBP8.88□□□□□ -0.99
SPTLC3-205ENST00000476791 RSPH4AQ5TD94 716 aa8.87□□□□□ -0.99
SPTLC3-205ENST00000476791 BMP2KQ9NSY1 1161 aaPredicted RBP8.86□□□□□ -0.99
SPTLC3-205ENST00000476791 ATMINO43313 823 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-205ENST00000476791 CHRM1P11229 460 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-205ENST00000476791 ASTLQ6HA08 431 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-205ENST00000476791 ATN1P54259 1190 aaPredicted RBP8.83□□□□□ -1
SPTLC3-205ENST00000476791 RSPH6AQ9H0K4 717 aa8.83□□□□□ -1
SPTLC3-205ENST00000476791 TIE1P35590 1138 aa8.83□□□□□ -1
SPTLC3-205ENST00000476791 TTLL13PA6NNM8 815 aa8.82□□□□□ -1
SPTLC3-205ENST00000476791 ZNF467Q7Z7K2 595 aaPredicted RBP8.81□□□□□ -1
SPTLC3-205ENST00000476791 TMEM106CQ9BVX2 250 aa8.81□□□□□ -1
SPTLC3-205ENST00000476791 RBM10P98175 930 aaKnown RBP8.81□□□□□ -1
SPTLC3-205ENST00000476791 HSP90B1P14625 803 aaKnown RBP8.8□□□□□ -1
SPTLC3-205ENST00000476791 TRIM41Q8WV44 630 aa8.8□□□□□ -1
SPTLC3-205ENST00000476791 PKD2Q13563 968 aa8.78□□□□□ -1
SPTLC3-205ENST00000476791 POLR3GLQ9BT43 218 aa8.78□□□□□ -1
SPTLC3-205ENST00000476791 TRIM35Q9UPQ4 493 aa8.78□□□□□ -1
SPTLC3-205ENST00000476791 ECM2O94769 699 aaPredicted RBP8.77□□□□□ -1.01
SPTLC3-205ENST00000476791 PPARGC1BQ86YN6 1023 aaKnown RBP8.77□□□□□ -1.01
SPTLC3-205ENST00000476791 SHROOM4Q9ULL8 1493 aa8.76□□□□□ -1.01
SPTLC3-205ENST00000476791 RNF25Q96BH1 459 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms