RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 MYH16Q9H6N6 1097 aa9□□□□□ -0.97
TTC3-215ENST00000476784 TMC1Q8TDI8 760 aa9□□□□□ -0.97
TTC3-215ENST00000476784 UPF2Q9HAU5 1272 aaKnown RBP8.99□□□□□ -0.97
TTC3-215ENST00000476784 SOX12O15370 315 aa8.96□□□□□ -0.97
TTC3-215ENST00000476784 CHIC2Q9UKJ5 165 aa8.96□□□□□ -0.97
TTC3-215ENST00000476784 G3V3G9 751 aa8.96□□□□□ -0.98
TTC3-215ENST00000476784 DCAF8Q5TAQ9 597 aa8.96□□□□□ -0.98
TTC3-215ENST00000476784 AMER1Q5JTC6 1135 aaPredicted RBP8.96□□□□□ -0.98
TTC3-215ENST00000476784 WDR43Q15061 677 aaKnown RBP eCLIP8.95□□□□□ -0.98
TTC3-215ENST00000476784 ZNF330Q9Y3S2 320 aaPredicted RBP8.95□□□□□ -0.98
TTC3-215ENST00000476784 MSH5O43196 834 aa8.95□□□□□ -0.98
TTC3-215ENST00000476784 TSPY4P0CV99 314 aa8.93□□□□□ -0.98
TTC3-215ENST00000476784 TSPY10P0CW01 314 aa8.93□□□□□ -0.98
TTC3-215ENST00000476784 MEX3CQ5U5Q3 659 aaKnown RBP8.93□□□□□ -0.98
TTC3-215ENST00000476784 NAP1L2Q9ULW6 460 aaPredicted RBP8.93□□□□□ -0.98
TTC3-215ENST00000476784 LAS1LQ9Y4W2 734 aaKnown RBP8.92□□□□□ -0.98
TTC3-215ENST00000476784 ZRSR1Q15695 479 aaKnown RBP8.92□□□□□ -0.98
TTC3-215ENST00000476784 HRCP23327 699 aa8.91□□□□□ -0.98
TTC3-215ENST00000476784 FKBP8Q14318 412 aa8.89□□□□□ -0.99
TTC3-215ENST00000476784 CSB-PGBD3P0DP91 1061 aa8.89□□□□□ -0.99
TTC3-215ENST00000476784 ANP32AP39687 249 aaKnown RBP8.89□□□□□ -0.99
TTC3-215ENST00000476784 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.89□□□□□ -0.99
TTC3-215ENST00000476784 POGKQ9P215 609 aa8.89□□□□□ -0.99
TTC3-215ENST00000476784 OS9Q13438 667 aaPredicted RBP8.88□□□□□ -0.99
TTC3-215ENST00000476784 FAM9BQ8IZU0 186 aa8.88□□□□□ -0.99
TTC3-215ENST00000476784 EIF4G2P78344 907 aaKnown RBP eCLIP8.87□□□□□ -0.99
TTC3-215ENST00000476784 ANO8Q9HCE9 1232 aaPredicted RBP8.87□□□□□ -0.99
TTC3-215ENST00000476784 CNKSR2Q8WXI2 1034 aa8.87□□□□□ -0.99
TTC3-215ENST00000476784 PAK3O75914 559 aaPredicted RBP8.87□□□□□ -0.99
TTC3-215ENST00000476784 FGD1P98174 961 aa8.86□□□□□ -0.99
TTC3-215ENST00000476784 RGL3Q3MIN7 710 aa8.85□□□□□ -0.99
TTC3-215ENST00000476784 NBR1Q14596 966 aa8.85□□□□□ -0.99
TTC3-215ENST00000476784 PDE4CQ08493 712 aa8.85□□□□□ -0.99
TTC3-215ENST00000476784 NCLP19338 710 aaKnown RBP8.84□□□□□ -0.99
TTC3-215ENST00000476784 FBXO3Q9UK99 471 aa8.82□□□□□ -1
TTC3-215ENST00000476784 EIF5BO60841 1220 aaKnown RBP8.82□□□□□ -1
TTC3-215ENST00000476784 CWC22Q9HCG8 908 aaKnown RBP8.82□□□□□ -1
TTC3-215ENST00000476784 TNNT2P45379 298 aaPredicted RBP8.8□□□□□ -1
TTC3-215ENST00000476784 ERCC6Q03468 1493 aa8.8□□□□□ -1
TTC3-215ENST00000476784 KCNJ4P48050 445 aa8.8□□□□□ -1
TTC3-215ENST00000476784 TONSLQ96HA7 1378 aa8.79□□□□□ -1
TTC3-215ENST00000476784 PPP1R1BQ9UD71 204 aaPredicted RBP8.78□□□□□ -1
TTC3-215ENST00000476784 NEUROD2Q15784 382 aa8.78□□□□□ -1
TTC3-215ENST00000476784 WWC1Q8IX03 1113 aa8.78□□□□□ -1
TTC3-215ENST00000476784 GTF2E1P29083 439 aaPredicted RBP8.78□□□□□ -1
TTC3-215ENST00000476784 VPS53Q5VIR6 699 aa8.77□□□□□ -1.01
TTC3-215ENST00000476784 CFAP53Q96M91 514 aa8.77□□□□□ -1.01
TTC3-215ENST00000476784 TRIM44Q96DX7 344 aaPredicted RBP8.77□□□□□ -1.01
TTC3-215ENST00000476784 PLEKHD1A6NEE1 506 aa8.76□□□□□ -1.01
TTC3-215ENST00000476784 SAFB2Q14151 953 aaKnown RBP eCLIP8.76□□□□□ -1.01
TTC3-215ENST00000476784 HDGFP51858 240 aaKnown RBP8.76□□□□□ -1.01
TTC3-215ENST00000476784 CASC1Q6TDU7 716 aa8.76□□□□□ -1.01
TTC3-215ENST00000476784 SENP3-EIF4A1A0A087X0R7 540 aa8.76□□□□□ -1.01
TTC3-215ENST00000476784 MAPK8IP3Q9UPT6 1336 aa8.74□□□□□ -1.01
TTC3-215ENST00000476784 HNRNPUQ00839 825 aaKnown RBP eCLIP8.74□□□□□ -1.01
TTC3-215ENST00000476784 PLCB2Q00722 1185 aa8.74□□□□□ -1.01
TTC3-215ENST00000476784 FRAT2O75474 233 aaPredicted RBP8.73□□□□□ -1.01
TTC3-215ENST00000476784 U2SURPO15042 1029 aaKnown RBP8.73□□□□□ -1.01
TTC3-215ENST00000476784 CHMP3Q9Y3E7 222 aa8.72□□□□□ -1.01
TTC3-215ENST00000476784 FTSJ3Q8IY81 847 aaKnown RBP8.72□□□□□ -1.01
TTC3-215ENST00000476784 GNL2Q13823 731 aaKnown RBP8.72□□□□□ -1.01
TTC3-215ENST00000476784 TAF7LQ5H9L4 462 aa8.71□□□□□ -1.01
TTC3-215ENST00000476784 CTDP1Q9Y5B0 961 aaPredicted RBP8.71□□□□□ -1.01
TTC3-215ENST00000476784 RAD21O60216 631 aa8.71□□□□□ -1.01
TTC3-215ENST00000476784 EVA1CP58658 441 aa8.71□□□□□ -1.01
TTC3-215ENST00000476784 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
TTC3-215ENST00000476784 STK26Q9P289 416 aa8.71□□□□□ -1.02
TTC3-215ENST00000476784 SF3B2Q13435 895 aaKnown RBP8.7□□□□□ -1.02
TTC3-215ENST00000476784 PTMAP06454 111 aaKnown RBP8.7□□□□□ -1.02
TTC3-215ENST00000476784 RRP7BPQ9NSQ0 103 aa8.7□□□□□ -1.02
TTC3-215ENST00000476784 SRPK2P78362 688 aaKnown RBP8.69□□□□□ -1.02
TTC3-215ENST00000476784 GGT6Q6P531 493 aa8.68□□□□□ -1.02
TTC3-215ENST00000476784 RTF1Q92541 710 aaKnown RBP8.68□□□□□ -1.02
TTC3-215ENST00000476784 CCDC136Q96JN2 1154 aa8.68□□□□□ -1.02
TTC3-215ENST00000476784 GORABQ5T7V8 394 aa8.68□□□□□ -1.02
TTC3-215ENST00000476784 FOXD1Q16676 465 aa8.68□□□□□ -1.02
TTC3-215ENST00000476784 SAMD1Q6SPF0 538 aaPredicted RBP8.68□□□□□ -1.02
TTC3-215ENST00000476784 NUDCQ9Y266 331 aa8.68□□□□□ -1.02
TTC3-215ENST00000476784 MTUS2Q5JR59 1369 aa8.67□□□□□ -1.02
TTC3-215ENST00000476784 ANP32EQ9BTT0 268 aa8.66□□□□□ -1.02
TTC3-215ENST00000476784 TRIM34Q9BYJ4 488 aa8.66□□□□□ -1.02
TTC3-215ENST00000476784 DDX10Q13206 875 aaKnown RBP8.66□□□□□ -1.02
TTC3-215ENST00000476784 DNTTIP2Q5QJE6 756 aaKnown RBP8.66□□□□□ -1.02
TTC3-215ENST00000476784 CFAP44Q96MT7 982 aa8.66□□□□□ -1.02
TTC3-215ENST00000476784 PNNQ9H307 717 aaKnown RBP8.66□□□□□ -1.02
TTC3-215ENST00000476784 KNSTRNQ9Y448 316 aa8.66□□□□□ -1.02
TTC3-215ENST00000476784 NOC3LQ8WTT2 800 aaKnown RBP8.65□□□□□ -1.02
TTC3-215ENST00000476784 SYTL4Q96C24 671 aaPredicted RBP8.65□□□□□ -1.02
TTC3-215ENST00000476784 TCEAL9Q9UHQ7 104 aa8.65□□□□□ -1.02
TTC3-215ENST00000476784 KIAA2012Q0VF49 1180 aa8.65□□□□□ -1.02
TTC3-215ENST00000476784 ERICH6BQ5W0A0 696 aa8.65□□□□□ -1.02
TTC3-215ENST00000476784 MARCH6O60337 910 aa8.65□□□□□ -1.02
TTC3-215ENST00000476784 GOLGA6L22H0YM25 854 aa8.64□□□□□ -1.03
TTC3-215ENST00000476784 MRS2Q9HD23 443 aa8.64□□□□□ -1.03
TTC3-215ENST00000476784 NUTM2FA1L443 756 aa8.64□□□□□ -1.03
TTC3-215ENST00000476784 HIRIP3Q9BW71 556 aaPredicted RBP8.64□□□□□ -1.03
TTC3-215ENST00000476784 GOLGA6L6A8MZA4 724 aa8.62□□□□□ -1.03
TTC3-215ENST00000476784 FRAT1Q92837 279 aaPredicted RBP8.62□□□□□ -1.03
TTC3-215ENST00000476784 LTV1Q96GA3 475 aaPredicted RBP8.62□□□□□ -1.03
TTC3-215ENST00000476784 EID1Q9Y6B2 187 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms