RNA–Protein interactions for RNA: ENST00000470067.5

CUL4A-206, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-206ENST00000470067 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
CUL4A-206ENST00000470067 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
CUL4A-206ENST00000470067 PITPNM1O00562 1244 aa16.55■□□□□ 0.24
CUL4A-206ENST00000470067 CUX2O14529 1486 aa16.54■□□□□ 0.24
CUL4A-206ENST00000470067 PKD2Q13563 968 aa16.54■□□□□ 0.24
CUL4A-206ENST00000470067 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
CUL4A-206ENST00000470067 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
CUL4A-206ENST00000470067 PEG3Q9GZU2 1588 aa16.48■□□□□ 0.23
CUL4A-206ENST00000470067 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
CUL4A-206ENST00000470067 CREBZFQ9NS37 354 aa16.47■□□□□ 0.23
CUL4A-206ENST00000470067 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
CUL4A-206ENST00000470067 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
CUL4A-206ENST00000470067 CIZ1Q9ULV3 898 aaPredicted RBP16.45■□□□□ 0.22
CUL4A-206ENST00000470067 THOC2Q8NI27 1593 aaKnown RBP16.37■□□□□ 0.21
CUL4A-206ENST00000470067 GSE1Q14687 1217 aa16.36■□□□□ 0.21
CUL4A-206ENST00000470067 TRIM41Q8WV44 630 aa16.34■□□□□ 0.21
CUL4A-206ENST00000470067 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
CUL4A-206ENST00000470067 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
CUL4A-206ENST00000470067 MNX1P50219 401 aaPredicted RBP16.32■□□□□ 0.2
CUL4A-206ENST00000470067 NUBP1P53384 320 aa16.32■□□□□ 0.2
CUL4A-206ENST00000470067 LAMC3Q9Y6N6 1575 aa16.31■□□□□ 0.2
CUL4A-206ENST00000470067 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
CUL4A-206ENST00000470067 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
CUL4A-206ENST00000470067 FAM212AQ96EL1 285 aa16.28■□□□□ 0.2
CUL4A-206ENST00000470067 WIZO95785 1651 aa16.27■□□□□ 0.2
CUL4A-206ENST00000470067 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
CUL4A-206ENST00000470067 CHADLQ6NUI6 762 aa16.22■□□□□ 0.19
CUL4A-206ENST00000470067 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
CUL4A-206ENST00000470067 RGL2O15211 777 aa16.2■□□□□ 0.18
CUL4A-206ENST00000470067 CHRDL2Q6WN34 429 aa16.19■□□□□ 0.18
CUL4A-206ENST00000470067 PRKAR2AP13861 404 aaKnown RBP16.18■□□□□ 0.18
CUL4A-206ENST00000470067 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
CUL4A-206ENST00000470067 FARP1Q9Y4F1 1045 aaPredicted RBP16.16■□□□□ 0.18
CUL4A-206ENST00000470067 RASEFQ8IZ41 740 aa16.15■□□□□ 0.18
CUL4A-206ENST00000470067 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
CUL4A-206ENST00000470067 MRC2Q9UBG0 1479 aa16.11■□□□□ 0.17
CUL4A-206ENST00000470067 WDR62O43379 1518 aa16.09■□□□□ 0.17
CUL4A-206ENST00000470067 TAOK2Q9UL54 1235 aa16.08■□□□□ 0.16
CUL4A-206ENST00000470067 CHRM1P11229 460 aaPredicted RBP16.05■□□□□ 0.16
CUL4A-206ENST00000470067 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
CUL4A-206ENST00000470067 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
CUL4A-206ENST00000470067 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.05■□□□□ 0.16
CUL4A-206ENST00000470067 CFTRP13569 1480 aa16.04■□□□□ 0.16
CUL4A-206ENST00000470067 BBXQ8WY36 941 aaPredicted RBP16.04■□□□□ 0.16
CUL4A-206ENST00000470067 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
CUL4A-206ENST00000470067 TSPYL2Q9H2G4 693 aaPredicted RBP16.01■□□□□ 0.15
CUL4A-206ENST00000470067 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
CUL4A-206ENST00000470067 RIOK3O14730 519 aaKnown RBP16■□□□□ 0.15
CUL4A-206ENST00000470067 CHGAP10645 457 aaKnown RBP16■□□□□ 0.15
CUL4A-206ENST00000470067 TOP2AP11388 1531 aaKnown RBP15.99■□□□□ 0.15
CUL4A-206ENST00000470067 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
CUL4A-206ENST00000470067 PYGBP11216 843 aa15.97■□□□□ 0.15
CUL4A-206ENST00000470067 PAK3O75914 559 aaPredicted RBP15.96■□□□□ 0.15
CUL4A-206ENST00000470067 RNF25Q96BH1 459 aaPredicted RBP15.96■□□□□ 0.15
CUL4A-206ENST00000470067 VGFO15240 615 aaPredicted RBP15.9■□□□□ 0.14
CUL4A-206ENST00000470067 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
CUL4A-206ENST00000470067 HS6ST3Q8IZP7 471 aa15.89■□□□□ 0.13
CUL4A-206ENST00000470067 HAP1P54257 671 aaPredicted RBP15.84■□□□□ 0.13
CUL4A-206ENST00000470067 PAXIP1Q6ZW49 1069 aaPredicted RBP15.84■□□□□ 0.13
CUL4A-206ENST00000470067 ZNF467Q7Z7K2 595 aaPredicted RBP15.82■□□□□ 0.12
CUL4A-206ENST00000470067 SPRYD3Q8NCJ5 442 aa15.82■□□□□ 0.12
CUL4A-206ENST00000470067 CCDC61Q9Y6R9 512 aa15.82■□□□□ 0.12
CUL4A-206ENST00000470067 ZNF608Q9ULD9 1512 aaPredicted RBP15.82■□□□□ 0.12
CUL4A-206ENST00000470067 STK25O00506 426 aa15.81■□□□□ 0.12
CUL4A-206ENST00000470067 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
CUL4A-206ENST00000470067 SGIP1Q9BQI5 828 aa15.8■□□□□ 0.12
CUL4A-206ENST00000470067 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
CUL4A-206ENST00000470067 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
CUL4A-206ENST00000470067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.74■□□□□ 0.11
CUL4A-206ENST00000470067 CD44P16070 742 aaKnown RBP15.74■□□□□ 0.11
CUL4A-206ENST00000470067 ZFP91Q96JP5 570 aaPredicted RBP15.74■□□□□ 0.11
CUL4A-206ENST00000470067 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
CUL4A-206ENST00000470067 STK24Q9Y6E0 443 aa15.72■□□□□ 0.11
CUL4A-206ENST00000470067 BCL11BQ9C0K0 894 aaPredicted RBP15.71■□□□□ 0.11
CUL4A-206ENST00000470067 IFT140Q96RY7 1462 aa15.71■□□□□ 0.1
CUL4A-206ENST00000470067 PDAP1Q13442 181 aaKnown RBP15.7■□□□□ 0.1
CUL4A-206ENST00000470067 ZNF579Q8NAF0 562 aaKnown RBP15.7■□□□□ 0.1
CUL4A-206ENST00000470067 PCDHB13Q9Y5F0 798 aa15.69■□□□□ 0.1
CUL4A-206ENST00000470067 PCDHB8Q9UN66 801 aa15.68■□□□□ 0.1
CUL4A-206ENST00000470067 KIF12Q96FN5 646 aa15.66■□□□□ 0.1
CUL4A-206ENST00000470067 RIMBP3CA6NJZ7 1639 aa15.65■□□□□ 0.1
CUL4A-206ENST00000470067 RIMBP3BA6NNM3 1639 aa15.65■□□□□ 0.1
CUL4A-206ENST00000470067 RIMBP3Q9UFD9 1639 aa15.65■□□□□ 0.1
CUL4A-206ENST00000470067 AQRO60306 1485 aaKnown RBP eCLIP15.65■□□□□ 0.1
CUL4A-206ENST00000470067 MAP3K13O43283 966 aa15.64■□□□□ 0.09
CUL4A-206ENST00000470067 TARBP1Q13395 1621 aaKnown RBP15.64■□□□□ 0.09
CUL4A-206ENST00000470067 DNMBPQ6XZF7 1577 aa15.63■□□□□ 0.09
CUL4A-206ENST00000470067 VSIG10Q8N0Z9 540 aa15.62■□□□□ 0.09
CUL4A-206ENST00000470067 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
CUL4A-206ENST00000470067 RYDENQ9NUL5 291 aaKnown RBP15.61■□□□□ 0.09
CUL4A-206ENST00000470067 C19orf67A6NJJ6 358 aa15.6■□□□□ 0.09
CUL4A-206ENST00000470067 PSEN1P49768 467 aa15.6■□□□□ 0.09
CUL4A-206ENST00000470067 IFNL1Q8IU54 200 aa15.6■□□□□ 0.09
CUL4A-206ENST00000470067 NKX1-1Q15270 411 aaPredicted RBP15.59■□□□□ 0.09
CUL4A-206ENST00000470067 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
CUL4A-206ENST00000470067 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
CUL4A-206ENST00000470067 ARHGEF11O15085 1522 aa15.58■□□□□ 0.09
CUL4A-206ENST00000470067 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
CUL4A-206ENST00000470067 PHF12Q96QT6 1004 aa15.56■□□□□ 0.08
CUL4A-206ENST00000470067 CHD1O14646 1710 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms