RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 NCLP19338 710 aaKnown RBP1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 PLCB2Q00722 1185 aa1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 CNPY4Q8N129 248 aa1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 IL27Q8NEV9 243 aa1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 CCER1Q8TC90 406 aaPredicted RBP1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 BBXQ8WY36 941 aaPredicted RBP1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 ZNF592Q92610 1267 aa1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 ZFP91Q96JP5 570 aaPredicted RBP1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 TSHZ2Q9NRE2 1034 aa1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 BRPF3Q9ULD4 1205 aa1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 PPP6R1Q9UPN7 881 aa1.27□□□□□ -2.21
RPL39P28-201ENST00000465655 PATL2C9JE40 543 aaKnown RBP1.26□□□□□ -2.21
RPL39P28-201ENST00000465655 CANXP27824 592 aaKnown RBP1.26□□□□□ -2.21
RPL39P28-201ENST00000465655 CNGB1Q14028 1251 aaPredicted RBP1.26□□□□□ -2.21
RPL39P28-201ENST00000465655 NBR1Q14596 966 aa1.26□□□□□ -2.21
RPL39P28-201ENST00000465655 TMED8Q6PL24 325 aaPredicted RBP1.26□□□□□ -2.21
RPL39P28-201ENST00000465655 TICAM2Q86XR7 235 aa1.26□□□□□ -2.21
RPL39P28-201ENST00000465655 IPO4Q8TEX9 1081 aaKnown RBP1.26□□□□□ -2.21
RPL39P28-201ENST00000465655 BCCIPQ9P287 314 aaKnown RBP eCLIP1.26□□□□□ -2.21
RPL39P28-201ENST00000465655 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.26□□□□□ -2.21
RPL39P28-201ENST00000465655 ARID4BQ4LE39 1312 aaPredicted RBP1.25□□□□□ -2.21
RPL39P28-201ENST00000465655 HMGB1P09429 215 aaKnown RBP1.25□□□□□ -2.21
RPL39P28-201ENST00000465655 MAPK8IP2Q13387 824 aaPredicted RBP1.25□□□□□ -2.21
RPL39P28-201ENST00000465655 FTSJ3Q8IY81 847 aaKnown RBP1.25□□□□□ -2.21
RPL39P28-201ENST00000465655 PLCD3Q8N3E9 789 aa1.25□□□□□ -2.21
RPL39P28-201ENST00000465655 SECISBP2LQ93073 1101 aaKnown RBP1.25□□□□□ -2.21
RPL39P28-201ENST00000465655 USP35Q9P2H5 1018 aa1.25□□□□□ -2.21
RPL39P28-201ENST00000465655 CLSTN1O94985 981 aa1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 PTMSP20962 102 aa1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 FAM193AP78312 1265 aa1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 FBLN2P98095 1184 aa1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 OS9Q13438 667 aaPredicted RBP1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 HSP90AA2PQ14568 343 aaPredicted RBP1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 DIEXFQ68CQ4 756 aaKnown RBP1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 TEX2Q8IWB9 1127 aa1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 PSMD1Q99460 953 aa1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 PLCD4Q9BRC7 762 aa1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 SUPT16HQ9Y5B9 1047 aaKnown RBP1.24□□□□□ -2.21
RPL39P28-201ENST00000465655 CCDC180Q9P1Z9 1646 aa1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 ZNF316A6NFI3 1004 aaPredicted RBP1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 SOX12O15370 315 aa1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 APPP05067 770 aa1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 PTMAP06454 111 aaKnown RBP1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 HSP90AA1P07900 732 aaKnown RBP1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 GTF2E1P29083 439 aaPredicted RBP1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 CERS3Q8IU89 383 aa1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 FAM9BQ8IZU0 186 aa1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 SLC4A1APQ9BWU0 796 aaKnown RBP1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 CWC22Q9HCG8 908 aaKnown RBP1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 KDM2AQ9Y2K7 1162 aa1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 RBM19Q9Y4C8 960 aaKnown RBP1.23□□□□□ -2.21
RPL39P28-201ENST00000465655 MYO15BQ96JP2 1530 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 ZBTB7CA1YPR0 619 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 VGLL3A8MV65 326 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 PPM1GO15355 546 aaPredicted RBP1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 MSH5O43196 834 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 KDM4AO75164 1064 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 NEFMP07197 916 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 RBM25P49756 843 aaKnown RBP1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 RGS3P49796 1198 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 IRX3P78415 501 aaPredicted RBP1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 FAM50AQ14320 339 aaKnown RBP1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 FAM43BQ6ZT52 329 aaPredicted RBP1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 ANP32BQ92688 251 aaKnown RBP1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 ZNF428Q96B54 188 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 STAC3Q96MF2 364 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 PUS7Q96PZ0 661 aaKnown RBP1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 PRDM16Q9HAZ2 1276 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 RNF216Q9NWF9 866 aaPredicted RBP1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 KCNG1Q9UIX4 513 aa1.22□□□□□ -2.21
RPL39P28-201ENST00000465655 E9PSI1 815 aa1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 RRP9O43818 475 aaKnown RBP1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 ANAPC15P60006 121 aa1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 FOXD4L5Q5VV16 416 aaPredicted RBP1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 AEBP1Q8IUX7 1158 aa1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 P3H3Q8IVL6 736 aa1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 GPATCH11Q8N954 259 aa1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 FOXD4L4Q8WXT5 416 aaPredicted RBP1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 ZNF692Q9BU19 519 aaPredicted RBP1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 NOP58Q9Y2X3 529 aaKnown RBP1.21□□□□□ -2.22
RPL39P28-201ENST00000465655 ARID3CA6NKF2 412 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 CLGNO14967 610 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 RAD21O60216 631 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 MYCNP04198 464 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 TRHP20396 242 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 MCCP23508 829 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 ITGAEP38570 1179 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 TNNT2P45379 298 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 CALD1Q05682 793 aaKnown RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 FKBP8Q14318 412 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 FOXD1Q16676 465 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 CCDC27Q2M243 656 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 FOXD4L6Q3SYB3 417 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 GRIPAP1Q4V328 841 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 CDCA8Q53HL2 280 aa1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 DNTTIP2Q5QJE6 756 aaKnown RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 FOXD4L3Q6VB84 417 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 PIAS4Q8N2W9 510 aaPredicted RBP1.2□□□□□ -2.22
RPL39P28-201ENST00000465655 MPNDQ8N594 471 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms