RNA–Protein interactions for RNA: ENST00000461623.1

ABCA9-204, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5

Gene ABCA9, Length 2,172 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-204ENST00000461623 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
ABCA9-204ENST00000461623 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.49□□□□□ -0.41
ABCA9-204ENST00000461623 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.42
ABCA9-204ENST00000461623 HRCP23327 699 aa12.46□□□□□ -0.42
ABCA9-204ENST00000461623 MIER1Q8N108 512 aa12.44□□□□□ -0.42
ABCA9-204ENST00000461623 POLA2Q14181 598 aa12.42□□□□□ -0.42
ABCA9-204ENST00000461623 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
ABCA9-204ENST00000461623 TRIM41Q8WV44 630 aa12.41□□□□□ -0.42
ABCA9-204ENST00000461623 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
ABCA9-204ENST00000461623 P3H3Q8IVL6 736 aa12.4□□□□□ -0.42
ABCA9-204ENST00000461623 SHROOM4Q9ULL8 1493 aa12.34□□□□□ -0.43
ABCA9-204ENST00000461623 KCNV2Q8TDN2 545 aa12.33□□□□□ -0.44
ABCA9-204ENST00000461623 ZC3H15Q8WU90 426 aaKnown RBP12.29□□□□□ -0.44
ABCA9-204ENST00000461623 SLC24A3Q9HC58 644 aa12.28□□□□□ -0.44
ABCA9-204ENST00000461623 STK25O00506 426 aa12.25□□□□□ -0.45
ABCA9-204ENST00000461623 RIOK3O14730 519 aaKnown RBP12.25□□□□□ -0.45
ABCA9-204ENST00000461623 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
ABCA9-204ENST00000461623 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
ABCA9-204ENST00000461623 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
ABCA9-204ENST00000461623 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
ABCA9-204ENST00000461623 RSPH6AQ9H0K4 717 aa12.21□□□□□ -0.45
ABCA9-204ENST00000461623 ARID3AQ99856 593 aa12.17□□□□□ -0.46
ABCA9-204ENST00000461623 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
ABCA9-204ENST00000461623 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
ABCA9-204ENST00000461623 GSE1Q14687 1217 aa12.15□□□□□ -0.46
ABCA9-204ENST00000461623 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.47
ABCA9-204ENST00000461623 CADPS2Q86UW7 1296 aa12.14□□□□□ -0.47
ABCA9-204ENST00000461623 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
ABCA9-204ENST00000461623 WDR70Q9NW82 654 aa12.13□□□□□ -0.47
ABCA9-204ENST00000461623 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
ABCA9-204ENST00000461623 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
ABCA9-204ENST00000461623 MYO15BQ96JP2 1530 aa12.13□□□□□ -0.47
ABCA9-204ENST00000461623 VGFO15240 615 aaPredicted RBP12.12□□□□□ -0.47
ABCA9-204ENST00000461623 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
ABCA9-204ENST00000461623 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
ABCA9-204ENST00000461623 ZMYND10O75800 440 aa12.06□□□□□ -0.48
ABCA9-204ENST00000461623 NUBP1P53384 320 aa12.04□□□□□ -0.48
ABCA9-204ENST00000461623 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
ABCA9-204ENST00000461623 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
ABCA9-204ENST00000461623 ZFP91Q96JP5 570 aaPredicted RBP12.03□□□□□ -0.48
ABCA9-204ENST00000461623 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
ABCA9-204ENST00000461623 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
ABCA9-204ENST00000461623 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
ABCA9-204ENST00000461623 SEMA3EO15041 775 aa12.01□□□□□ -0.49
ABCA9-204ENST00000461623 CAPN15O75808 1086 aa12.01□□□□□ -0.49
ABCA9-204ENST00000461623 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
ABCA9-204ENST00000461623 GPBP1L1Q9HC44 474 aaPredicted RBP12.01□□□□□ -0.49
ABCA9-204ENST00000461623 TESPA1A2RU30 521 aaPredicted RBP12.01□□□□□ -0.49
ABCA9-204ENST00000461623 ARHGEF1Q92888 912 aaKnown RBP12□□□□□ -0.49
ABCA9-204ENST00000461623 DCAF8Q5TAQ9 597 aa11.99□□□□□ -0.49
ABCA9-204ENST00000461623 IL27Q8NEV9 243 aa11.99□□□□□ -0.49
ABCA9-204ENST00000461623 ZBTB7CA1YPR0 619 aa11.98□□□□□ -0.49
ABCA9-204ENST00000461623 ARID3CA6NKF2 412 aa11.98□□□□□ -0.49
ABCA9-204ENST00000461623 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
ABCA9-204ENST00000461623 ABCB7O75027 752 aa11.97□□□□□ -0.49
ABCA9-204ENST00000461623 NECTIN2Q92692 538 aa11.97□□□□□ -0.49
ABCA9-204ENST00000461623 PDIA4P13667 645 aaKnown RBP11.96□□□□□ -0.5
ABCA9-204ENST00000461623 ABCC9O60706 1549 aa11.95□□□□□ -0.5
ABCA9-204ENST00000461623 APBB1O00213 710 aa11.92□□□□□ -0.5
ABCA9-204ENST00000461623 BARGINQ6ZT62 677 aa11.92□□□□□ -0.5
ABCA9-204ENST00000461623 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
ABCA9-204ENST00000461623 CHRM1P11229 460 aaPredicted RBP11.89□□□□□ -0.51
ABCA9-204ENST00000461623 NACADO15069 1562 aa11.88□□□□□ -0.51
ABCA9-204ENST00000461623 KDM4CQ9H3R0 1056 aa11.88□□□□□ -0.51
ABCA9-204ENST00000461623 E2F4Q16254 413 aa11.86□□□□□ -0.51
ABCA9-204ENST00000461623 AK7Q96M32 723 aa11.85□□□□□ -0.51
ABCA9-204ENST00000461623 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
ABCA9-204ENST00000461623 SCRIBQ14160 1630 aa11.84□□□□□ -0.51
ABCA9-204ENST00000461623 LOC105371045A0A1W2PR82 267 aa11.78□□□□□ -0.52
ABCA9-204ENST00000461623 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
ABCA9-204ENST00000461623 CCDC82Q8N4S0 544 aa11.76□□□□□ -0.53
ABCA9-204ENST00000461623 PYGBP11216 843 aa11.73□□□□□ -0.53
ABCA9-204ENST00000461623 PDE4DQ08499 809 aa11.73□□□□□ -0.53
ABCA9-204ENST00000461623 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
ABCA9-204ENST00000461623 KCTD17Q8N5Z5 321 aa11.72□□□□□ -0.53
ABCA9-204ENST00000461623 TRIM66O15016 1216 aa11.72□□□□□ -0.53
ABCA9-204ENST00000461623 RASEFQ8IZ41 740 aa11.71□□□□□ -0.54
ABCA9-204ENST00000461623 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.54
ABCA9-204ENST00000461623 FAM117AQ9C073 453 aa11.7□□□□□ -0.54
ABCA9-204ENST00000461623 FLIIQ13045 1269 aa11.68□□□□□ -0.54
ABCA9-204ENST00000461623 MFRPQ9BY79 579 aa11.68□□□□□ -0.54
ABCA9-204ENST00000461623 RBM26Q5T8P6 1007 aaKnown RBP11.68□□□□□ -0.54
ABCA9-204ENST00000461623 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
ABCA9-204ENST00000461623 RB1CC1Q8TDY2 1594 aa11.66□□□□□ -0.54
ABCA9-204ENST00000461623 GPIHBP1Q8IV16 184 aa11.65□□□□□ -0.54
ABCA9-204ENST00000461623 ONECUT3O60422 494 aaPredicted RBP11.65□□□□□ -0.54
ABCA9-204ENST00000461623 PPP1R37O75864 691 aa11.65□□□□□ -0.54
ABCA9-204ENST00000461623 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
ABCA9-204ENST00000461623 RAD21O60216 631 aa11.64□□□□□ -0.55
ABCA9-204ENST00000461623 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
ABCA9-204ENST00000461623 TRAK2O60296 914 aa11.63□□□□□ -0.55
ABCA9-204ENST00000461623 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
ABCA9-204ENST00000461623 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
ABCA9-204ENST00000461623 RGS22Q8NE09 1264 aa11.62□□□□□ -0.55
ABCA9-204ENST00000461623 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
ABCA9-204ENST00000461623 A6NJR5 290 aa11.61□□□□□ -0.55
ABCA9-204ENST00000461623 IGSF3O75054 1194 aa11.61□□□□□ -0.55
ABCA9-204ENST00000461623 ARIH1Q9Y4X5 557 aaPredicted RBP11.59□□□□□ -0.55
ABCA9-204ENST00000461623 NCKAP5LQ9HCH0 1330 aa11.59□□□□□ -0.55
ABCA9-204ENST00000461623 MLLT3P42568 568 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms