RNA–Protein interactions for RNA: ENST00000443423.1

NEFMP1-201, Transcript of neurofilament medium pseudogene 1, humanhuman

BASIC

Gene NEFMP1, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP1-201ENST00000443423 LCE2DQ5TA82 110 aaPredicted RBP9.1□□□□□ -0.95
NEFMP1-201ENST00000443423 PAK3O75914 559 aaPredicted RBP9.09□□□□□ -0.95
NEFMP1-201ENST00000443423 CCDC61Q9Y6R9 512 aa9.09□□□□□ -0.95
NEFMP1-201ENST00000443423 POTEFA5A3E0 1075 aa9.08□□□□□ -0.96
NEFMP1-201ENST00000443423 METRNQ9UJH8 293 aa9.08□□□□□ -0.96
NEFMP1-201ENST00000443423 POTEMA6NI47 508 aa9.07□□□□□ -0.96
NEFMP1-201ENST00000443423 TRPC6Q9Y210 931 aa9.07□□□□□ -0.96
NEFMP1-201ENST00000443423 ATN1P54259 1190 aaPredicted RBP9.05□□□□□ -0.96
NEFMP1-201ENST00000443423 POTEGQ6S5H5 508 aa9.04□□□□□ -0.96
NEFMP1-201ENST00000443423 KIF12Q96FN5 646 aa9.03□□□□□ -0.96
NEFMP1-201ENST00000443423 TSPYL2Q9H2G4 693 aaPredicted RBP9.03□□□□□ -0.96
NEFMP1-201ENST00000443423 C7P10643 843 aa9.02□□□□□ -0.97
NEFMP1-201ENST00000443423 SLC39A7Q92504 469 aa9.01□□□□□ -0.97
NEFMP1-201ENST00000443423 BMP2KQ9NSY1 1161 aaPredicted RBP8.99□□□□□ -0.97
NEFMP1-201ENST00000443423 RASEFQ8IZ41 740 aa8.97□□□□□ -0.97
NEFMP1-201ENST00000443423 MAP3K13O43283 966 aa8.96□□□□□ -0.98
NEFMP1-201ENST00000443423 COLQQ9Y215 455 aaPredicted RBP8.93□□□□□ -0.98
NEFMP1-201ENST00000443423 TIE1P35590 1138 aa8.89□□□□□ -0.99
NEFMP1-201ENST00000443423 TTLL13PA6NNM8 815 aa8.88□□□□□ -0.99
NEFMP1-201ENST00000443423 MAMSTRQ6ZN01 415 aa8.87□□□□□ -0.99
NEFMP1-201ENST00000443423 FKBP8Q14318 412 aa8.86□□□□□ -0.99
NEFMP1-201ENST00000443423 NUBP1P53384 320 aa8.85□□□□□ -0.99
NEFMP1-201ENST00000443423 FAM163AQ96GL9 167 aaPredicted RBP8.85□□□□□ -0.99
NEFMP1-201ENST00000443423 MIER1Q8N108 512 aa8.84□□□□□ -0.99
NEFMP1-201ENST00000443423 PCDH10Q9P2E7 1040 aa8.84□□□□□ -0.99
NEFMP1-201ENST00000443423 SCUBE2Q9NQ36 999 aa8.82□□□□□ -1
NEFMP1-201ENST00000443423 TRIM35Q9UPQ4 493 aa8.8□□□□□ -1
NEFMP1-201ENST00000443423 IFNL1Q8IU54 200 aa8.78□□□□□ -1
NEFMP1-201ENST00000443423 SGIP1Q9BQI5 828 aa8.77□□□□□ -1.01
NEFMP1-201ENST00000443423 IER5LQ5T953 404 aa8.75□□□□□ -1.01
NEFMP1-201ENST00000443423 PCDHB13Q9Y5F0 798 aa8.75□□□□□ -1.01
NEFMP1-201ENST00000443423 SEC24BO95487 1268 aa8.71□□□□□ -1.02
NEFMP1-201ENST00000443423 IRX5P78411 483 aaPredicted RBP8.71□□□□□ -1.02
NEFMP1-201ENST00000443423 ST18O60284 1047 aa8.7□□□□□ -1.02
NEFMP1-201ENST00000443423 PLCD3Q8N3E9 789 aa8.7□□□□□ -1.02
NEFMP1-201ENST00000443423 PLEKHG5O94827 1062 aa8.68□□□□□ -1.02
NEFMP1-201ENST00000443423 CDAN1Q8IWY9 1227 aa8.68□□□□□ -1.02
NEFMP1-201ENST00000443423 TMEM106CQ9BVX2 250 aa8.68□□□□□ -1.02
NEFMP1-201ENST00000443423 SLAIN1Q8ND83 568 aa8.65□□□□□ -1.02
NEFMP1-201ENST00000443423 FAM212AQ96EL1 285 aa8.61□□□□□ -1.03
NEFMP1-201ENST00000443423 PYGBP11216 843 aa8.6□□□□□ -1.03
NEFMP1-201ENST00000443423 PLCG2P16885 1265 aa8.59□□□□□ -1.03
NEFMP1-201ENST00000443423 ZBTB47Q9UFB7 747 aaPredicted RBP8.59□□□□□ -1.03
NEFMP1-201ENST00000443423 PCDHB8Q9UN66 801 aa8.59□□□□□ -1.03
NEFMP1-201ENST00000443423 OCEL1Q9H607 264 aa8.58□□□□□ -1.04
NEFMP1-201ENST00000443423 AMER1Q5JTC6 1135 aaPredicted RBP8.57□□□□□ -1.04
NEFMP1-201ENST00000443423 PDCD7Q8N8D1 485 aaKnown RBP8.56□□□□□ -1.04
NEFMP1-201ENST00000443423 POTEB3A0JP26 581 aa8.52□□□□□ -1.05
NEFMP1-201ENST00000443423 MMRN1Q13201 1228 aa8.52□□□□□ -1.05
NEFMP1-201ENST00000443423 DCAF8Q5TAQ9 597 aa8.52□□□□□ -1.05
NEFMP1-201ENST00000443423 POTEBQ6S5H4 581 aa8.52□□□□□ -1.05
NEFMP1-201ENST00000443423 SPNS2Q8IVW8 549 aa8.52□□□□□ -1.05
NEFMP1-201ENST00000443423 RTN4Q9NQC3 1192 aaKnown RBP8.52□□□□□ -1.05
NEFMP1-201ENST00000443423 MARVELD3Q96A59 401 aa8.51□□□□□ -1.05
NEFMP1-201ENST00000443423 FBXO3Q9UK99 471 aa8.51□□□□□ -1.05
NEFMP1-201ENST00000443423 TMEM121BQ9BXQ6 578 aaPredicted RBP8.49□□□□□ -1.05
NEFMP1-201ENST00000443423 ILDR1Q86SU0 546 aaPredicted RBP8.48□□□□□ -1.05
NEFMP1-201ENST00000443423 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
NEFMP1-201ENST00000443423 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
NEFMP1-201ENST00000443423 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
NEFMP1-201ENST00000443423 CHRM1P11229 460 aaPredicted RBP8.43□□□□□ -1.06
NEFMP1-201ENST00000443423 DPY19L2Q6NUT2 758 aa8.42□□□□□ -1.06
NEFMP1-201ENST00000443423 VASPP50552 380 aaPredicted RBP8.4□□□□□ -1.06
NEFMP1-201ENST00000443423 SNPHO15079 494 aa8.39□□□□□ -1.07
NEFMP1-201ENST00000443423 PSEN1P49768 467 aa8.38□□□□□ -1.07
NEFMP1-201ENST00000443423 ZNF467Q7Z7K2 595 aaPredicted RBP8.38□□□□□ -1.07
NEFMP1-201ENST00000443423 HOXB3P14651 431 aaPredicted RBP8.37□□□□□ -1.07
NEFMP1-201ENST00000443423 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.37□□□□□ -1.07
NEFMP1-201ENST00000443423 GSE1Q14687 1217 aa8.36□□□□□ -1.07
NEFMP1-201ENST00000443423 HS3ST6Q96QI5 342 aa8.36□□□□□ -1.07
NEFMP1-201ENST00000443423 MKRN3Q13064 507 aaKnown RBP8.35□□□□□ -1.07
NEFMP1-201ENST00000443423 C3orf67Q6ZVT6 689 aa8.34□□□□□ -1.07
NEFMP1-201ENST00000443423 L3MBTL3Q96JM7 780 aaPredicted RBP8.34□□□□□ -1.07
NEFMP1-201ENST00000443423 EMP3P54852 163 aa8.33□□□□□ -1.08
NEFMP1-201ENST00000443423 FAM205CA6NFA0 338 aa8.32□□□□□ -1.08
NEFMP1-201ENST00000443423 IFNLR1Q8IU57 520 aaPredicted RBP8.32□□□□□ -1.08
NEFMP1-201ENST00000443423 KLHL34Q8N239 644 aa8.31□□□□□ -1.08
NEFMP1-201ENST00000443423 PDAP1Q13442 181 aaKnown RBP8.29□□□□□ -1.08
NEFMP1-201ENST00000443423 GOLGA2Q08379 1002 aa8.27□□□□□ -1.09
NEFMP1-201ENST00000443423 CABP2Q9NPB3 220 aa8.27□□□□□ -1.09
NEFMP1-201ENST00000443423 BOLA1Q9Y3E2 137 aa8.26□□□□□ -1.09
NEFMP1-201ENST00000443423 TMEM92Q6UXU6 159 aa8.25□□□□□ -1.09
NEFMP1-201ENST00000443423 HOXB1P14653 301 aaPredicted RBP8.24□□□□□ -1.09
NEFMP1-201ENST00000443423 EFCAB3Q8N7B9 438 aa8.2□□□□□ -1.1
NEFMP1-201ENST00000443423 SPOCK2Q92563 424 aa8.2□□□□□ -1.1
NEFMP1-201ENST00000443423 MS4A4AQ96JQ5 239 aa8.18□□□□□ -1.1
NEFMP1-201ENST00000443423 CIZ1Q9ULV3 898 aaPredicted RBP8.18□□□□□ -1.1
NEFMP1-201ENST00000443423 RNF25Q96BH1 459 aaPredicted RBP8.16□□□□□ -1.1
NEFMP1-201ENST00000443423 GPR153Q6NV75 609 aa8.15□□□□□ -1.1
NEFMP1-201ENST00000443423 SLC24A1O60721 1099 aa8.14□□□□□ -1.11
NEFMP1-201ENST00000443423 MICALL2Q8IY33 904 aa8.14□□□□□ -1.11
NEFMP1-201ENST00000443423 ERBB3P21860 1342 aa8.12□□□□□ -1.11
NEFMP1-201ENST00000443423 DOK7Q18PE1 504 aa8.12□□□□□ -1.11
NEFMP1-201ENST00000443423 VARS2Q5ST30 1063 aaKnown RBP8.12□□□□□ -1.11
NEFMP1-201ENST00000443423 PKD2Q13563 968 aa8.1□□□□□ -1.11
NEFMP1-201ENST00000443423 ZNF710Q8N1W2 664 aa8.1□□□□□ -1.11
NEFMP1-201ENST00000443423 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
NEFMP1-201ENST00000443423 RNF166Q96A37 237 aaPredicted RBP8.07□□□□□ -1.12
NEFMP1-201ENST00000443423 PHF8Q9UPP1 1060 aa8.07□□□□□ -1.12
NEFMP1-201ENST00000443423 G3V3G9 751 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms