RNA–Protein interactions for RNA: ENST00000437994.6

CD109-203, Transcript of CD109 molecule, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CD109, Length 9,401 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-203ENST00000437994 KIAA2012Q0VF49 1180 aa10.46□□□□□ -0.74
CD109-203ENST00000437994 RSF1Q96T23 1441 aaPredicted RBP10.45□□□□□ -0.74
CD109-203ENST00000437994 MSNP26038 577 aaKnown RBP10.45□□□□□ -0.74
CD109-203ENST00000437994 ARXQ96QS3 562 aa10.44□□□□□ -0.74
CD109-203ENST00000437994 FTSJ3Q8IY81 847 aaKnown RBP10.44□□□□□ -0.74
CD109-203ENST00000437994 PNNQ9H307 717 aaKnown RBP10.44□□□□□ -0.74
CD109-203ENST00000437994 FAM9BQ8IZU0 186 aa10.43□□□□□ -0.74
CD109-203ENST00000437994 CFAP53Q96M91 514 aa10.43□□□□□ -0.74
CD109-203ENST00000437994 EEA1Q15075 1411 aa10.43□□□□□ -0.74
CD109-203ENST00000437994 MRS2Q9HD23 443 aa10.41□□□□□ -0.74
CD109-203ENST00000437994 MCCP23508 829 aa10.39□□□□□ -0.75
CD109-203ENST00000437994 RB1CC1Q8TDY2 1594 aa10.38□□□□□ -0.75
CD109-203ENST00000437994 GOLGA6L1Q8N7Z2 621 aa10.37□□□□□ -0.75
CD109-203ENST00000437994 SYAP1Q96A49 352 aaPredicted RBP10.37□□□□□ -0.75
CD109-203ENST00000437994 FBLN2P98095 1184 aa10.37□□□□□ -0.75
CD109-203ENST00000437994 CCDC34Q96HJ3 373 aa10.36□□□□□ -0.75
CD109-203ENST00000437994 EIF4G2P78344 907 aaKnown RBP eCLIP10.36□□□□□ -0.75
CD109-203ENST00000437994 HSP90AB1P08238 724 aaKnown RBP10.36□□□□□ -0.75
CD109-203ENST00000437994 NOP58Q9Y2X3 529 aaKnown RBP10.36□□□□□ -0.75
CD109-203ENST00000437994 GOLGA6L4A6NEF3 574 aa10.35□□□□□ -0.75
CD109-203ENST00000437994 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
CD109-203ENST00000437994 MTUS2Q5JR59 1369 aa10.35□□□□□ -0.75
CD109-203ENST00000437994 HAP1P54257 671 aaPredicted RBP10.35□□□□□ -0.75
CD109-203ENST00000437994 HSCBQ8IWL3 235 aa10.35□□□□□ -0.75
CD109-203ENST00000437994 HTATSF1O43719 755 aaKnown RBP10.35□□□□□ -0.75
CD109-203ENST00000437994 ZNF777Q9ULD5 760 aaPredicted RBP10.35□□□□□ -0.75
CD109-203ENST00000437994 SETQ01105 290 aaPredicted RBP10.34□□□□□ -0.75
CD109-203ENST00000437994 NOC3LQ8WTT2 800 aaKnown RBP10.34□□□□□ -0.75
CD109-203ENST00000437994 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
CD109-203ENST00000437994 GOLGA3Q08378 1498 aa10.33□□□□□ -0.76
CD109-203ENST00000437994 PHF14O94880 888 aa10.32□□□□□ -0.76
CD109-203ENST00000437994 DDX10Q13206 875 aaKnown RBP10.32□□□□□ -0.76
CD109-203ENST00000437994 FGD1P98174 961 aa10.32□□□□□ -0.76
CD109-203ENST00000437994 TPM4P67936 248 aa10.32□□□□□ -0.76
CD109-203ENST00000437994 KNSTRNQ9Y448 316 aa10.31□□□□□ -0.76
CD109-203ENST00000437994 ABCC9O60706 1549 aa10.31□□□□□ -0.76
CD109-203ENST00000437994 TSPY4P0CV99 314 aa10.3□□□□□ -0.76
CD109-203ENST00000437994 TSPY10P0CW01 314 aa10.3□□□□□ -0.76
CD109-203ENST00000437994 TNNT3P45378 269 aaPredicted RBP10.3□□□□□ -0.76
CD109-203ENST00000437994 DRC7Q8IY82 874 aa10.3□□□□□ -0.76
CD109-203ENST00000437994 CSPP1Q1MSJ5 1256 aa10.3□□□□□ -0.76
CD109-203ENST00000437994 BAZ1AQ9NRL2 1556 aaPredicted RBP10.3□□□□□ -0.76
CD109-203ENST00000437994 GBP4Q96PP9 640 aa10.3□□□□□ -0.76
CD109-203ENST00000437994 CHMP4AQ9BY43 222 aa10.29□□□□□ -0.76
CD109-203ENST00000437994 CLIP1P30622 1438 aa10.28□□□□□ -0.76
CD109-203ENST00000437994 CHGAP10645 457 aaKnown RBP10.28□□□□□ -0.76
CD109-203ENST00000437994 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
CD109-203ENST00000437994 MAPK8IP3Q9UPT6 1336 aa10.28□□□□□ -0.76
CD109-203ENST00000437994 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
CD109-203ENST00000437994 NUDCQ9Y266 331 aa10.27□□□□□ -0.77
CD109-203ENST00000437994 KCNJ4P48050 445 aa10.27□□□□□ -0.77
CD109-203ENST00000437994 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
CD109-203ENST00000437994 GNL2Q13823 731 aaKnown RBP10.25□□□□□ -0.77
CD109-203ENST00000437994 CALRP27797 417 aaKnown RBP10.25□□□□□ -0.77
CD109-203ENST00000437994 NACADO15069 1562 aa10.24□□□□□ -0.77
CD109-203ENST00000437994 FHAD1B1AJZ9 1412 aa10.23□□□□□ -0.77
CD109-203ENST00000437994 OS9Q13438 667 aaPredicted RBP10.23□□□□□ -0.77
CD109-203ENST00000437994 CALD1Q05682 793 aaKnown RBP10.22□□□□□ -0.77
CD109-203ENST00000437994 CEP164Q9UPV0 1460 aa10.22□□□□□ -0.77
CD109-203ENST00000437994 PPP1R15AO75807 674 aaPredicted RBP10.22□□□□□ -0.77
CD109-203ENST00000437994 CHMP4CQ96CF2 233 aa10.21□□□□□ -0.77
CD109-203ENST00000437994 PLCB2Q00722 1185 aa10.21□□□□□ -0.78
CD109-203ENST00000437994 KIAA1211Q6ZU35 1233 aa10.21□□□□□ -0.78
CD109-203ENST00000437994 GPATCH3Q96I76 525 aa10.21□□□□□ -0.78
CD109-203ENST00000437994 SCAF1Q9H7N4 1312 aaKnown RBP10.21□□□□□ -0.78
CD109-203ENST00000437994 A0A0U1RQG5 324 aaPredicted RBP10.21□□□□□ -0.78
CD109-203ENST00000437994 SALL2Q9Y467 1007 aaPredicted RBP10.2□□□□□ -0.78
CD109-203ENST00000437994 KANK1Q14678 1352 aa10.2□□□□□ -0.78
CD109-203ENST00000437994 CCDC70Q6NSX1 233 aa10.2□□□□□ -0.78
CD109-203ENST00000437994 HDAC5Q9UQL6 1122 aa10.2□□□□□ -0.78
CD109-203ENST00000437994 GPS2Q13227 327 aa10.19□□□□□ -0.78
CD109-203ENST00000437994 NPHP1O15259 732 aa10.18□□□□□ -0.78
CD109-203ENST00000437994 EIF3AQ14152 1382 aaKnown RBP10.18□□□□□ -0.78
CD109-203ENST00000437994 PHLDB1Q86UU1 1377 aa10.18□□□□□ -0.78
CD109-203ENST00000437994 RSPH6AQ9H0K4 717 aa10.18□□□□□ -0.78
CD109-203ENST00000437994 KIF3AQ9Y496 699 aa10.17□□□□□ -0.78
CD109-203ENST00000437994 IPO8O15397 1037 aaKnown RBP10.17□□□□□ -0.78
CD109-203ENST00000437994 CLSTN1O94985 981 aa10.17□□□□□ -0.78
CD109-203ENST00000437994 CEP162Q5TB80 1403 aa10.17□□□□□ -0.78
CD109-203ENST00000437994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.16□□□□□ -0.78
CD109-203ENST00000437994 GOLGA6L3A6NEY3 463 aa10.16□□□□□ -0.78
CD109-203ENST00000437994 P3H3Q8IVL6 736 aa10.16□□□□□ -0.78
CD109-203ENST00000437994 C14orf37Q86TY3 774 aa10.14□□□□□ -0.79
CD109-203ENST00000437994 A0A0G2JS52 829 aa10.13□□□□□ -0.79
CD109-203ENST00000437994 TPM3P06753 285 aa10.13□□□□□ -0.79
CD109-203ENST00000437994 NAP1L2Q9ULW6 460 aaPredicted RBP10.13□□□□□ -0.79
CD109-203ENST00000437994 KDM2AQ9Y2K7 1162 aa10.13□□□□□ -0.79
CD109-203ENST00000437994 LAS1LQ9Y4W2 734 aaKnown RBP10.13□□□□□ -0.79
CD109-203ENST00000437994 DDX11L8A8MPP1 907 aa10.13□□□□□ -0.79
CD109-203ENST00000437994 NOM1Q5C9Z4 860 aaKnown RBP10.13□□□□□ -0.79
CD109-203ENST00000437994 CEP89Q96ST8 783 aa10.12□□□□□ -0.79
CD109-203ENST00000437994 KIF27Q86VH2 1401 aa10.12□□□□□ -0.79
CD109-203ENST00000437994 TULP1O00294 542 aaPredicted RBP10.11□□□□□ -0.79
CD109-203ENST00000437994 HDGFP51858 240 aaKnown RBP10.11□□□□□ -0.79
CD109-203ENST00000437994 TIMELESSQ9UNS1 1208 aa10.11□□□□□ -0.79
CD109-203ENST00000437994 TEX35Q5T0J7 233 aa10.11□□□□□ -0.79
CD109-203ENST00000437994 TSR1Q2NL82 804 aaKnown RBP10.11□□□□□ -0.79
CD109-203ENST00000437994 ANO8Q9HCE9 1232 aaPredicted RBP10.11□□□□□ -0.79
CD109-203ENST00000437994 MIER1Q8N108 512 aa10.1□□□□□ -0.79
CD109-203ENST00000437994 ATP6V1DQ9Y5K8 247 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms