RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 HDGFP51858 240 aaKnown RBP13.37□□□□□ -0.27
FN1-209ENST00000432072 SALL2Q9Y467 1007 aaPredicted RBP13.36□□□□□ -0.27
FN1-209ENST00000432072 CFDP1Q9UEE9 299 aaPredicted RBP13.35□□□□□ -0.27
FN1-209ENST00000432072 POGKQ9P215 609 aa13.34□□□□□ -0.27
FN1-209ENST00000432072 RGL3Q3MIN7 710 aa13.34□□□□□ -0.27
FN1-209ENST00000432072 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.27
FN1-209ENST00000432072 RRP7BPQ9NSQ0 103 aa13.33□□□□□ -0.28
FN1-209ENST00000432072 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
FN1-209ENST00000432072 UPF2Q9HAU5 1272 aaKnown RBP13.29□□□□□ -0.28
FN1-209ENST00000432072 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
FN1-209ENST00000432072 KANK1Q14678 1352 aa13.28□□□□□ -0.28
FN1-209ENST00000432072 CDK11BP21127 795 aaKnown RBP13.27□□□□□ -0.29
FN1-209ENST00000432072 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.26□□□□□ -0.29
FN1-209ENST00000432072 FAM9BQ8IZU0 186 aa13.26□□□□□ -0.29
FN1-209ENST00000432072 CLIP1P30622 1438 aa13.25□□□□□ -0.29
FN1-209ENST00000432072 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
FN1-209ENST00000432072 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
FN1-209ENST00000432072 BAZ1AQ9NRL2 1556 aaPredicted RBP13.22□□□□□ -0.29
FN1-209ENST00000432072 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
FN1-209ENST00000432072 CDCA8Q53HL2 280 aa13.21□□□□□ -0.29
FN1-209ENST00000432072 CCDC9Q9Y3X0 531 aaKnown RBP13.21□□□□□ -0.29
FN1-209ENST00000432072 KAT6BQ8WYB5 2073 aa13.2□□□□□ -0.3
FN1-209ENST00000432072 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
FN1-209ENST00000432072 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
FN1-209ENST00000432072 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
FN1-209ENST00000432072 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
FN1-209ENST00000432072 ANP32BQ92688 251 aaKnown RBP13.18□□□□□ -0.3
FN1-209ENST00000432072 CARMIL2Q6F5E8 1435 aa13.17□□□□□ -0.3
FN1-209ENST00000432072 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
FN1-209ENST00000432072 GGT6Q6P531 493 aa13.16□□□□□ -0.3
FN1-209ENST00000432072 ANP32AP39687 249 aaKnown RBP13.16□□□□□ -0.3
FN1-209ENST00000432072 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
FN1-209ENST00000432072 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
FN1-209ENST00000432072 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
FN1-209ENST00000432072 HNRNPUQ00839 825 aaKnown RBP eCLIP13.15□□□□□ -0.3
FN1-209ENST00000432072 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
FN1-209ENST00000432072 SOX12O15370 315 aa13.15□□□□□ -0.31
FN1-209ENST00000432072 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
FN1-209ENST00000432072 TMX4Q9H1E5 349 aaPredicted RBP13.14□□□□□ -0.31
FN1-209ENST00000432072 GOLGA3Q08378 1498 aa13.13□□□□□ -0.31
FN1-209ENST00000432072 CCNB3Q8WWL7 1395 aa13.13□□□□□ -0.31
FN1-209ENST00000432072 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
FN1-209ENST00000432072 EID1Q9Y6B2 187 aa13.11□□□□□ -0.31
FN1-209ENST00000432072 SRPK2P78362 688 aaKnown RBP13.1□□□□□ -0.31
FN1-209ENST00000432072 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
FN1-209ENST00000432072 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
FN1-209ENST00000432072 CUX2O14529 1486 aa13.09□□□□□ -0.31
FN1-209ENST00000432072 NUDCQ9Y266 331 aa13.09□□□□□ -0.31
FN1-209ENST00000432072 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.31
FN1-209ENST00000432072 EEA1Q15075 1411 aa13.07□□□□□ -0.32
FN1-209ENST00000432072 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
FN1-209ENST00000432072 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
FN1-209ENST00000432072 STK26Q9P289 416 aa13.07□□□□□ -0.32
FN1-209ENST00000432072 MEX3CQ5U5Q3 659 aaKnown RBP13.06□□□□□ -0.32
FN1-209ENST00000432072 TNNT2P45379 298 aaPredicted RBP13.06□□□□□ -0.32
FN1-209ENST00000432072 MRS2Q9HD23 443 aa13.06□□□□□ -0.32
FN1-209ENST00000432072 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
FN1-209ENST00000432072 SAFB2Q14151 953 aaKnown RBP eCLIP13.05□□□□□ -0.32
FN1-209ENST00000432072 PRDM2Q13029 1718 aa13.05□□□□□ -0.32
FN1-209ENST00000432072 SOGA1O94964 1423 aa13.04□□□□□ -0.32
FN1-209ENST00000432072 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
FN1-209ENST00000432072 OS9Q13438 667 aaPredicted RBP13.03□□□□□ -0.32
FN1-209ENST00000432072 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
FN1-209ENST00000432072 U2SURPO15042 1029 aaKnown RBP13.02□□□□□ -0.32
FN1-209ENST00000432072 OSCARQ8IYS5 282 aa13.02□□□□□ -0.32
FN1-209ENST00000432072 CEP164Q9UPV0 1460 aa13.02□□□□□ -0.33
FN1-209ENST00000432072 CARMIL1Q5VZK9 1371 aa13.02□□□□□ -0.33
FN1-209ENST00000432072 CASC1Q6TDU7 716 aa13.01□□□□□ -0.33
FN1-209ENST00000432072 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
FN1-209ENST00000432072 HIRIP3Q9BW71 556 aaPredicted RBP13.01□□□□□ -0.33
FN1-209ENST00000432072 ISY1Q9ULR0 285 aaKnown RBP13□□□□□ -0.33
FN1-209ENST00000432072 G3V3G9 751 aa12.99□□□□□ -0.33
FN1-209ENST00000432072 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
FN1-209ENST00000432072 RTF1Q92541 710 aaKnown RBP12.99□□□□□ -0.33
FN1-209ENST00000432072 NEUROD2Q15784 382 aa12.99□□□□□ -0.33
FN1-209ENST00000432072 EFCAB2Q5VUJ9 269 aa12.99□□□□□ -0.33
FN1-209ENST00000432072 CCDC136Q96JN2 1154 aa12.98□□□□□ -0.33
FN1-209ENST00000432072 TAOK2Q9UL54 1235 aa12.98□□□□□ -0.33
FN1-209ENST00000432072 ZNF330Q9Y3S2 320 aaPredicted RBP12.98□□□□□ -0.33
FN1-209ENST00000432072 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
FN1-209ENST00000432072 DCAF11Q8TEB1 546 aa12.95□□□□□ -0.34
FN1-209ENST00000432072 EVA1CP58658 441 aa12.95□□□□□ -0.34
FN1-209ENST00000432072 ZRSR1Q15695 479 aaKnown RBP12.94□□□□□ -0.34
FN1-209ENST00000432072 WASHC2CQ9Y4E1 1318 aa12.93□□□□□ -0.34
FN1-209ENST00000432072 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
FN1-209ENST00000432072 FGD1P98174 961 aa12.92□□□□□ -0.34
FN1-209ENST00000432072 TMF1P82094 1093 aa12.92□□□□□ -0.34
FN1-209ENST00000432072 NCLP19338 710 aaKnown RBP12.92□□□□□ -0.34
FN1-209ENST00000432072 FKBP8Q14318 412 aa12.92□□□□□ -0.34
FN1-209ENST00000432072 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
FN1-209ENST00000432072 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
FN1-209ENST00000432072 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
FN1-209ENST00000432072 WIZO95785 1651 aa12.91□□□□□ -0.34
FN1-209ENST00000432072 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
FN1-209ENST00000432072 NAP1L2Q9ULW6 460 aaPredicted RBP12.91□□□□□ -0.34
FN1-209ENST00000432072 MSH5O43196 834 aa12.9□□□□□ -0.34
FN1-209ENST00000432072 CC2D1BQ5T0F9 858 aaKnown RBP12.9□□□□□ -0.34
FN1-209ENST00000432072 KCNJ4P48050 445 aa12.9□□□□□ -0.35
FN1-209ENST00000432072 KIF3BO15066 747 aa12.89□□□□□ -0.35
FN1-209ENST00000432072 CLSTN1O94985 981 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms