RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
VTI1BP4-201ENST00000427516 DIEXFQ68CQ4 756 aaKnown RBP8.36□□□□□ -1.07
VTI1BP4-201ENST00000427516 CREBZFQ9NS37 354 aa8.36□□□□□ -1.07
VTI1BP4-201ENST00000427516 PRKCSHP14314 528 aaPredicted RBP8.33□□□□□ -1.08
VTI1BP4-201ENST00000427516 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
VTI1BP4-201ENST00000427516 GABBR2O75899 941 aa8.26□□□□□ -1.09
VTI1BP4-201ENST00000427516 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
VTI1BP4-201ENST00000427516 MNX1P50219 401 aaPredicted RBP8.25□□□□□ -1.09
VTI1BP4-201ENST00000427516 FAM9AQ8IZU1 332 aaPredicted RBP8.25□□□□□ -1.09
VTI1BP4-201ENST00000427516 ZCCHC6Q5VYS8 1495 aaKnown RBP8.23□□□□□ -1.09
VTI1BP4-201ENST00000427516 FKBP8Q14318 412 aa8.22□□□□□ -1.09
VTI1BP4-201ENST00000427516 CCER1Q8TC90 406 aaPredicted RBP8.22□□□□□ -1.09
VTI1BP4-201ENST00000427516 TRIM41Q8WV44 630 aa8.19□□□□□ -1.1
VTI1BP4-201ENST00000427516 ZNF316A6NFI3 1004 aaPredicted RBP8.18□□□□□ -1.1
VTI1BP4-201ENST00000427516 NPM1P06748 294 aaKnown RBP eCLIP8.17□□□□□ -1.1
VTI1BP4-201ENST00000427516 ERICH6BQ5W0A0 696 aa8.17□□□□□ -1.1
VTI1BP4-201ENST00000427516 ZRANB1Q9UGI0 708 aa8.17□□□□□ -1.1
VTI1BP4-201ENST00000427516 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
VTI1BP4-201ENST00000427516 CLCN6P51797 869 aa8.14□□□□□ -1.11
VTI1BP4-201ENST00000427516 MIER1Q8N108 512 aa8.13□□□□□ -1.11
VTI1BP4-201ENST00000427516 POTEIP0CG38 1075 aa8.11□□□□□ -1.11
VTI1BP4-201ENST00000427516 LOC105371045A0A1W2PR82 267 aa8.09□□□□□ -1.11
VTI1BP4-201ENST00000427516 PAK3O75914 559 aaPredicted RBP8.09□□□□□ -1.11
VTI1BP4-201ENST00000427516 PHF12Q96QT6 1004 aa8.08□□□□□ -1.12
VTI1BP4-201ENST00000427516 SUPT16HQ9Y5B9 1047 aaKnown RBP8.08□□□□□ -1.12
VTI1BP4-201ENST00000427516 TSHZ2Q9NRE2 1034 aa8.07□□□□□ -1.12
VTI1BP4-201ENST00000427516 GALR2O43603 387 aaPredicted RBP8.06□□□□□ -1.12
VTI1BP4-201ENST00000427516 PLEKHG5O94827 1062 aa8.05□□□□□ -1.12
VTI1BP4-201ENST00000427516 PLCD3Q8N3E9 789 aa8.05□□□□□ -1.12
VTI1BP4-201ENST00000427516 YTHDC1Q96MU7 727 aaKnown RBP8.04□□□□□ -1.12
VTI1BP4-201ENST00000427516 TSPYL2Q9H2G4 693 aaPredicted RBP8.04□□□□□ -1.12
VTI1BP4-201ENST00000427516 NEFLP07196 543 aa8.03□□□□□ -1.12
VTI1BP4-201ENST00000427516 RASEFQ8IZ41 740 aa8.02□□□□□ -1.13
VTI1BP4-201ENST00000427516 DCBLD2Q96PD2 775 aa8.02□□□□□ -1.13
VTI1BP4-201ENST00000427516 CCDC61Q9Y6R9 512 aa8.02□□□□□ -1.13
VTI1BP4-201ENST00000427516 WRNQ14191 1432 aaPredicted RBP eCLIP8□□□□□ -1.13
VTI1BP4-201ENST00000427516 FANCIQ9NVI1 1328 aa8□□□□□ -1.13
VTI1BP4-201ENST00000427516 NUBP1P53384 320 aa7.99□□□□□ -1.13
VTI1BP4-201ENST00000427516 FBXO3Q9UK99 471 aa7.99□□□□□ -1.13
VTI1BP4-201ENST00000427516 SLC24A1O60721 1099 aa7.98□□□□□ -1.13
VTI1BP4-201ENST00000427516 UBE2Q2Q8WVN8 375 aa7.98□□□□□ -1.13
VTI1BP4-201ENST00000427516 MS4A3Q96HJ5 214 aa7.98□□□□□ -1.13
VTI1BP4-201ENST00000427516 LHX8Q68G74 356 aa7.97□□□□□ -1.13
VTI1BP4-201ENST00000427516 KIF12Q96FN5 646 aa7.97□□□□□ -1.13
VTI1BP4-201ENST00000427516 ZBTB47Q9UFB7 747 aaPredicted RBP7.97□□□□□ -1.13
VTI1BP4-201ENST00000427516 MAP3K13O43283 966 aa7.92□□□□□ -1.14
VTI1BP4-201ENST00000427516 VASPP50552 380 aaPredicted RBP7.92□□□□□ -1.14
VTI1BP4-201ENST00000427516 GLIPR1L2Q4G1C9 344 aa7.92□□□□□ -1.14
VTI1BP4-201ENST00000427516 DAXXQ9UER7 740 aaPredicted RBP7.92□□□□□ -1.14
VTI1BP4-201ENST00000427516 ABCC9O60706 1549 aa7.92□□□□□ -1.14
VTI1BP4-201ENST00000427516 ASTLQ6HA08 431 aaPredicted RBP7.91□□□□□ -1.14
VTI1BP4-201ENST00000427516 ATMINO43313 823 aaPredicted RBP7.9□□□□□ -1.14
VTI1BP4-201ENST00000427516 EIF5BO60841 1220 aaKnown RBP7.9□□□□□ -1.14
VTI1BP4-201ENST00000427516 RBM19Q9Y4C8 960 aaKnown RBP7.9□□□□□ -1.14
VTI1BP4-201ENST00000427516 TRPC6Q9Y210 931 aa7.89□□□□□ -1.15
VTI1BP4-201ENST00000427516 RTL5Q5HYW3 569 aaPredicted RBP7.87□□□□□ -1.15
VTI1BP4-201ENST00000427516 FAM212AQ96EL1 285 aa7.87□□□□□ -1.15
VTI1BP4-201ENST00000427516 CDK11AQ9UQ88 783 aaPredicted RBP7.87□□□□□ -1.15
VTI1BP4-201ENST00000427516 RB1CC1Q8TDY2 1594 aa7.87□□□□□ -1.15
VTI1BP4-201ENST00000427516 DEKP35659 375 aaKnown RBP7.86□□□□□ -1.15
VTI1BP4-201ENST00000427516 SGIP1Q9BQI5 828 aa7.86□□□□□ -1.15
VTI1BP4-201ENST00000427516 POTEB2H3BUK9 544 aa7.85□□□□□ -1.15
VTI1BP4-201ENST00000427516 ATN1P54259 1190 aaPredicted RBP7.85□□□□□ -1.15
VTI1BP4-201ENST00000427516 DCAF8Q5TAQ9 597 aa7.84□□□□□ -1.15
VTI1BP4-201ENST00000427516 KLHL34Q8N239 644 aa7.84□□□□□ -1.15
VTI1BP4-201ENST00000427516 BMP2KQ9NSY1 1161 aaPredicted RBP7.84□□□□□ -1.15
VTI1BP4-201ENST00000427516 PCDHB13Q9Y5F0 798 aa7.83□□□□□ -1.16
VTI1BP4-201ENST00000427516 EEA1Q15075 1411 aa7.83□□□□□ -1.16
VTI1BP4-201ENST00000427516 TIE1P35590 1138 aa7.82□□□□□ -1.16
VTI1BP4-201ENST00000427516 IFNL1Q8IU54 200 aa7.82□□□□□ -1.16
VTI1BP4-201ENST00000427516 IFNLR1Q8IU57 520 aaPredicted RBP7.82□□□□□ -1.16
VTI1BP4-201ENST00000427516 C7P10643 843 aa7.81□□□□□ -1.16
VTI1BP4-201ENST00000427516 SLC39A7Q92504 469 aa7.81□□□□□ -1.16
VTI1BP4-201ENST00000427516 METRNQ9UJH8 293 aa7.8□□□□□ -1.16
VTI1BP4-201ENST00000427516 TTLL13PA6NNM8 815 aa7.79□□□□□ -1.16
VTI1BP4-201ENST00000427516 PYGBP11216 843 aa7.79□□□□□ -1.16
VTI1BP4-201ENST00000427516 OTUD5Q96G74 571 aa7.78□□□□□ -1.16
VTI1BP4-201ENST00000427516 USP35Q9P2H5 1018 aa7.78□□□□□ -1.16
VTI1BP4-201ENST00000427516 POTEFA5A3E0 1075 aa7.77□□□□□ -1.17
VTI1BP4-201ENST00000427516 POTEJP0CG39 1038 aa7.76□□□□□ -1.17
VTI1BP4-201ENST00000427516 GSE1Q14687 1217 aa7.76□□□□□ -1.17
VTI1BP4-201ENST00000427516 TNIKQ9UKE5 1360 aa7.75□□□□□ -1.17
VTI1BP4-201ENST00000427516 NOP58Q9Y2X3 529 aaKnown RBP7.75□□□□□ -1.17
VTI1BP4-201ENST00000427516 CEP162Q5TB80 1403 aa7.75□□□□□ -1.17
VTI1BP4-201ENST00000427516 CCER2I3L3R5 266 aa7.74□□□□□ -1.17
VTI1BP4-201ENST00000427516 SPOCK2Q92563 424 aa7.74□□□□□ -1.17
VTI1BP4-201ENST00000427516 PKNOX2Q96KN3 472 aa7.74□□□□□ -1.17
VTI1BP4-201ENST00000427516 RSPH6AQ9H0K4 717 aa7.74□□□□□ -1.17
VTI1BP4-201ENST00000427516 ANO8Q9HCE9 1232 aaPredicted RBP7.74□□□□□ -1.17
VTI1BP4-201ENST00000427516 TRIM35Q9UPQ4 493 aa7.74□□□□□ -1.17
VTI1BP4-201ENST00000427516 CHRM1P11229 460 aaPredicted RBP7.73□□□□□ -1.17
VTI1BP4-201ENST00000427516 ANP32AP39687 249 aaKnown RBP7.73□□□□□ -1.17
VTI1BP4-201ENST00000427516 PCDHB8Q9UN66 801 aa7.73□□□□□ -1.17
VTI1BP4-201ENST00000427516 TMEM106CQ9BVX2 250 aa7.72□□□□□ -1.17
VTI1BP4-201ENST00000427516 COLQQ9Y215 455 aaPredicted RBP7.72□□□□□ -1.17
VTI1BP4-201ENST00000427516 C11orf95C9JLR9 678 aaPredicted RBP7.7□□□□□ -1.18
VTI1BP4-201ENST00000427516 RSF1Q96T23 1441 aaPredicted RBP7.69□□□□□ -1.18
VTI1BP4-201ENST00000427516 IER5LQ5T953 404 aa7.69□□□□□ -1.18
VTI1BP4-201ENST00000427516 BCANQ96GW7 911 aa7.67□□□□□ -1.18
VTI1BP4-201ENST00000427516 PPP4R2Q9NY27 417 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms