RNA–Protein interactions for RNA: ENST00000422143.2

TRBV29-1-201, Transcript of T cell receptor beta variable 29-1, humanhuman

APPRIS P1 BASIC

Gene TRBV29-1, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV29-1-201ENST00000422143 PLCD3Q8N3E9 789 aa9.37□□□□□ -0.91
TRBV29-1-201ENST00000422143 CADPSQ9ULU8 1353 aa9.37□□□□□ -0.91
TRBV29-1-201ENST00000422143 CCDC88BA6NC98 1476 aa9.36□□□□□ -0.91
TRBV29-1-201ENST00000422143 PKD2Q13563 968 aa9.35□□□□□ -0.91
TRBV29-1-201ENST00000422143 MIER1Q8N108 512 aa9.34□□□□□ -0.91
TRBV29-1-201ENST00000422143 PLEKHG5O94827 1062 aa9.33□□□□□ -0.92
TRBV29-1-201ENST00000422143 ZBTB47Q9UFB7 747 aaPredicted RBP9.32□□□□□ -0.92
TRBV29-1-201ENST00000422143 CFTRP13569 1480 aa9.3□□□□□ -0.92
TRBV29-1-201ENST00000422143 RBM42Q9BTD8 480 aaKnown RBP9.3□□□□□ -0.92
TRBV29-1-201ENST00000422143 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
TRBV29-1-201ENST00000422143 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
TRBV29-1-201ENST00000422143 ERCC6Q03468 1493 aa9.26□□□□□ -0.93
TRBV29-1-201ENST00000422143 PLCB2Q00722 1185 aa9.25□□□□□ -0.93
TRBV29-1-201ENST00000422143 AKT1S1Q96B36 256 aa9.25□□□□□ -0.93
TRBV29-1-201ENST00000422143 ECM2O94769 699 aaPredicted RBP9.23□□□□□ -0.93
TRBV29-1-201ENST00000422143 FANCD2Q9BXW9 1451 aa9.22□□□□□ -0.93
TRBV29-1-201ENST00000422143 SPDYE1Q8NFV5 336 aaPredicted RBP9.22□□□□□ -0.93
TRBV29-1-201ENST00000422143 TRIM41Q8WV44 630 aa9.19□□□□□ -0.94
TRBV29-1-201ENST00000422143 CEP164Q9UPV0 1460 aa9.16□□□□□ -0.94
TRBV29-1-201ENST00000422143 KIF21AQ7Z4S6 1674 aa9.16□□□□□ -0.94
TRBV29-1-201ENST00000422143 MRC2Q9UBG0 1479 aa9.15□□□□□ -0.94
TRBV29-1-201ENST00000422143 THOC2Q8NI27 1593 aaKnown RBP9.15□□□□□ -0.95
TRBV29-1-201ENST00000422143 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.95
TRBV29-1-201ENST00000422143 BBXQ8WY36 941 aaPredicted RBP9.14□□□□□ -0.95
TRBV29-1-201ENST00000422143 CUX2O14529 1486 aa9.14□□□□□ -0.95
TRBV29-1-201ENST00000422143 CIZ1Q9ULV3 898 aaPredicted RBP9.13□□□□□ -0.95
TRBV29-1-201ENST00000422143 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.12□□□□□ -0.95
TRBV29-1-201ENST00000422143 WDR62O43379 1518 aa9.11□□□□□ -0.95
TRBV29-1-201ENST00000422143 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
TRBV29-1-201ENST00000422143 GSE1Q14687 1217 aa9.11□□□□□ -0.95
TRBV29-1-201ENST00000422143 REM2Q8IYK8 340 aaPredicted RBP9.11□□□□□ -0.95
TRBV29-1-201ENST00000422143 RGL2O15211 777 aa9.1□□□□□ -0.95
TRBV29-1-201ENST00000422143 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
TRBV29-1-201ENST00000422143 TOPBP1Q92547 1522 aa9.08□□□□□ -0.96
TRBV29-1-201ENST00000422143 NUBP1P53384 320 aa9.06□□□□□ -0.96
TRBV29-1-201ENST00000422143 HAP1P54257 671 aaPredicted RBP9.06□□□□□ -0.96
TRBV29-1-201ENST00000422143 NPM1P06748 294 aaKnown RBP eCLIP9.05□□□□□ -0.96
TRBV29-1-201ENST00000422143 CREBZFQ9NS37 354 aa9.05□□□□□ -0.96
TRBV29-1-201ENST00000422143 CUX1P39880 1505 aa9.05□□□□□ -0.96
TRBV29-1-201ENST00000422143 VSIG10Q8N0Z9 540 aa9.03□□□□□ -0.96
TRBV29-1-201ENST00000422143 ABCC8Q09428 1581 aa9.03□□□□□ -0.96
TRBV29-1-201ENST00000422143 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
TRBV29-1-201ENST00000422143 TAOK2Q9UL54 1235 aa9.02□□□□□ -0.97
TRBV29-1-201ENST00000422143 POLA1P09884 1462 aaPredicted RBP9.02□□□□□ -0.97
TRBV29-1-201ENST00000422143 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.97
TRBV29-1-201ENST00000422143 ZNF608Q9ULD9 1512 aaPredicted RBP9.01□□□□□ -0.97
TRBV29-1-201ENST00000422143 MNX1P50219 401 aaPredicted RBP9.01□□□□□ -0.97
TRBV29-1-201ENST00000422143 PRDM2Q13029 1718 aa9.01□□□□□ -0.97
TRBV29-1-201ENST00000422143 WRNQ14191 1432 aaPredicted RBP eCLIP9.01□□□□□ -0.97
TRBV29-1-201ENST00000422143 DCAF8Q5TAQ9 597 aa9.01□□□□□ -0.97
TRBV29-1-201ENST00000422143 FAM212AQ96EL1 285 aa9.01□□□□□ -0.97
TRBV29-1-201ENST00000422143 SOGA1O94964 1423 aa9□□□□□ -0.97
TRBV29-1-201ENST00000422143 IFT140Q96RY7 1462 aa9□□□□□ -0.97
TRBV29-1-201ENST00000422143 SPRYD3Q8NCJ5 442 aa8.99□□□□□ -0.97
TRBV29-1-201ENST00000422143 FGD5Q6ZNL6 1462 aa8.99□□□□□ -0.97
TRBV29-1-201ENST00000422143 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
TRBV29-1-201ENST00000422143 PITPNM1O00562 1244 aa8.98□□□□□ -0.97
TRBV29-1-201ENST00000422143 CHGAP10645 457 aaKnown RBP8.98□□□□□ -0.97
TRBV29-1-201ENST00000422143 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
TRBV29-1-201ENST00000422143 AQRO60306 1485 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRBV29-1-201ENST00000422143 CHRM1P11229 460 aaPredicted RBP8.97□□□□□ -0.97
TRBV29-1-201ENST00000422143 HS6ST3Q8IZP7 471 aa8.97□□□□□ -0.97
TRBV29-1-201ENST00000422143 DNAJC5Q9H3Z4 198 aa8.97□□□□□ -0.97
TRBV29-1-201ENST00000422143 SYNJ1O43426 1573 aa8.96□□□□□ -0.97
TRBV29-1-201ENST00000422143 TARBP1Q13395 1621 aaKnown RBP8.95□□□□□ -0.98
TRBV29-1-201ENST00000422143 RIOK3O14730 519 aaKnown RBP8.94□□□□□ -0.98
TRBV29-1-201ENST00000422143 CFAP44Q96MT7 982 aa8.94□□□□□ -0.98
TRBV29-1-201ENST00000422143 RNF25Q96BH1 459 aaPredicted RBP8.93□□□□□ -0.98
TRBV29-1-201ENST00000422143 TOP2BQ02880 1626 aa8.93□□□□□ -0.98
TRBV29-1-201ENST00000422143 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
TRBV29-1-201ENST00000422143 ABCA10Q8WWZ4 1543 aa8.9□□□□□ -0.98
TRBV29-1-201ENST00000422143 VGFO15240 615 aaPredicted RBP8.9□□□□□ -0.98
TRBV29-1-201ENST00000422143 SGIP1Q9BQI5 828 aa8.89□□□□□ -0.99
TRBV29-1-201ENST00000422143 BIVM-ERCC5R4GMW8 1640 aa8.89□□□□□ -0.99
TRBV29-1-201ENST00000422143 BCANQ96GW7 911 aa8.88□□□□□ -0.99
TRBV29-1-201ENST00000422143 GAPVD1Q14C86 1478 aa8.87□□□□□ -0.99
TRBV29-1-201ENST00000422143 EIF4G3O43432 1585 aaKnown RBP8.86□□□□□ -0.99
TRBV29-1-201ENST00000422143 GRIN2BQ13224 1484 aa8.85□□□□□ -0.99
TRBV29-1-201ENST00000422143 IGF1RP08069 1367 aa8.85□□□□□ -0.99
TRBV29-1-201ENST00000422143 KDM2AQ9Y2K7 1162 aa8.84□□□□□ -0.99
TRBV29-1-201ENST00000422143 SNAPC4Q5SXM2 1469 aa8.83□□□□□ -1
TRBV29-1-201ENST00000422143 TSHZ2Q9NRE2 1034 aa8.83□□□□□ -1
TRBV29-1-201ENST00000422143 FARP1Q9Y4F1 1045 aaPredicted RBP8.83□□□□□ -1
TRBV29-1-201ENST00000422143 RUSC2Q8N2Y8 1516 aa8.82□□□□□ -1
TRBV29-1-201ENST00000422143 STK25O00506 426 aa8.82□□□□□ -1
TRBV29-1-201ENST00000422143 CHMP7Q8WUX9 453 aaPredicted RBP8.82□□□□□ -1
TRBV29-1-201ENST00000422143 WDR97A6NE52 1622 aa8.82□□□□□ -1
TRBV29-1-201ENST00000422143 ABCA5Q8WWZ7 1642 aa8.81□□□□□ -1
TRBV29-1-201ENST00000422143 RYDENQ9NUL5 291 aaKnown RBP8.81□□□□□ -1
TRBV29-1-201ENST00000422143 KIF27Q86VH2 1401 aa8.8□□□□□ -1
TRBV29-1-201ENST00000422143 PYGBP11216 843 aa8.8□□□□□ -1
TRBV29-1-201ENST00000422143 MAGI1Q96QZ7 1491 aaPredicted RBP8.8□□□□□ -1
TRBV29-1-201ENST00000422143 CHADLQ6NUI6 762 aa8.79□□□□□ -1
TRBV29-1-201ENST00000422143 SYNJ2O15056 1496 aa8.78□□□□□ -1
TRBV29-1-201ENST00000422143 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
TRBV29-1-201ENST00000422143 NKX1-1Q15270 411 aaPredicted RBP8.78□□□□□ -1
TRBV29-1-201ENST00000422143 ZNF467Q7Z7K2 595 aaPredicted RBP8.78□□□□□ -1
TRBV29-1-201ENST00000422143 FHAD1B1AJZ9 1412 aa8.78□□□□□ -1
TRBV29-1-201ENST00000422143 ERICH3Q5RHP9 1530 aa8.76□□□□□ -1.01
TRBV29-1-201ENST00000422143 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms