RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 CCDC9Q9Y3X0 531 aaKnown RBP5.44□□□□□ -1.54
RGPD1-202ENST00000409776 ZBTB7CA1YPR0 619 aa5.43□□□□□ -1.54
RGPD1-202ENST00000409776 BCCIPQ9P287 314 aaKnown RBP eCLIP5.42□□□□□ -1.54
RGPD1-202ENST00000409776 VSIG10Q8N0Z9 540 aa5.42□□□□□ -1.54
RGPD1-202ENST00000409776 GTF3C3Q9Y5Q9 886 aa5.42□□□□□ -1.54
RGPD1-202ENST00000409776 NOC3LQ8WTT2 800 aaKnown RBP5.41□□□□□ -1.54
RGPD1-202ENST00000409776 KCNA4P22459 653 aa5.4□□□□□ -1.54
RGPD1-202ENST00000409776 PKNOX2Q96KN3 472 aa5.4□□□□□ -1.54
RGPD1-202ENST00000409776 PDE4CQ08493 712 aa5.4□□□□□ -1.54
RGPD1-202ENST00000409776 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.4□□□□□ -1.55
RGPD1-202ENST00000409776 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.39□□□□□ -1.55
RGPD1-202ENST00000409776 TSPYL1Q9H0U9 437 aa5.38□□□□□ -1.55
RGPD1-202ENST00000409776 UPF2Q9HAU5 1272 aaKnown RBP5.38□□□□□ -1.55
RGPD1-202ENST00000409776 CCDC136Q96JN2 1154 aa5.38□□□□□ -1.55
RGPD1-202ENST00000409776 DNAJC5BQ9UF47 199 aa5.38□□□□□ -1.55
RGPD1-202ENST00000409776 RRP12Q5JTH9 1297 aaKnown RBP5.38□□□□□ -1.55
RGPD1-202ENST00000409776 PAF1Q8N7H5 531 aa5.37□□□□□ -1.55
RGPD1-202ENST00000409776 CANXP27824 592 aaKnown RBP5.37□□□□□ -1.55
RGPD1-202ENST00000409776 NCBP3Q53F19 620 aaKnown RBP5.36□□□□□ -1.55
RGPD1-202ENST00000409776 L1TD1Q5T7N2 865 aaKnown RBP5.36□□□□□ -1.55
RGPD1-202ENST00000409776 PSMD1Q99460 953 aa5.36□□□□□ -1.55
RGPD1-202ENST00000409776 AXDND1Q5T1B0 1012 aaPredicted RBP5.36□□□□□ -1.55
RGPD1-202ENST00000409776 DYDC1Q8WWB3 177 aa5.36□□□□□ -1.55
RGPD1-202ENST00000409776 PRM3Q9NNZ6 103 aa5.35□□□□□ -1.55
RGPD1-202ENST00000409776 ZRSR1Q15695 479 aaKnown RBP5.33□□□□□ -1.56
RGPD1-202ENST00000409776 DEKP35659 375 aaKnown RBP5.33□□□□□ -1.56
RGPD1-202ENST00000409776 MAP7D2Q96T17 732 aa5.33□□□□□ -1.56
RGPD1-202ENST00000409776 OS9Q13438 667 aaPredicted RBP5.33□□□□□ -1.56
RGPD1-202ENST00000409776 HSP90AA2PQ14568 343 aaPredicted RBP5.33□□□□□ -1.56
RGPD1-202ENST00000409776 MPHOSPH10O00566 681 aaKnown RBP5.32□□□□□ -1.56
RGPD1-202ENST00000409776 CHMP3Q9Y3E7 222 aa5.32□□□□□ -1.56
RGPD1-202ENST00000409776 HMGB1P1B2RPK0 211 aaPredicted RBP5.32□□□□□ -1.56
RGPD1-202ENST00000409776 NRDCO43847 1150 aa5.32□□□□□ -1.56
RGPD1-202ENST00000409776 SLC4A1APQ9BWU0 796 aaKnown RBP5.32□□□□□ -1.56
RGPD1-202ENST00000409776 MSNP26038 577 aaKnown RBP5.31□□□□□ -1.56
RGPD1-202ENST00000409776 ZRSR2Q15696 482 aaKnown RBP5.31□□□□□ -1.56
RGPD1-202ENST00000409776 KLHL34Q8N239 644 aa5.31□□□□□ -1.56
RGPD1-202ENST00000409776 HSP90B1P14625 803 aaKnown RBP5.31□□□□□ -1.56
RGPD1-202ENST00000409776 HTATSF1O43719 755 aaKnown RBP5.31□□□□□ -1.56
RGPD1-202ENST00000409776 NOM1Q5C9Z4 860 aaKnown RBP5.3□□□□□ -1.56
RGPD1-202ENST00000409776 AEBP1Q8IUX7 1158 aa5.3□□□□□ -1.56
RGPD1-202ENST00000409776 HMGN5P82970 282 aaKnown RBP5.3□□□□□ -1.56
RGPD1-202ENST00000409776 SEPT11Q9NVA2 429 aaKnown RBP5.3□□□□□ -1.56
RGPD1-202ENST00000409776 ISY1Q9ULR0 285 aaKnown RBP5.3□□□□□ -1.56
RGPD1-202ENST00000409776 HRCP23327 699 aa5.3□□□□□ -1.56
RGPD1-202ENST00000409776 SSR1P43307 286 aaKnown RBP5.29□□□□□ -1.56
RGPD1-202ENST00000409776 ZNF771Q7L3S4 317 aaPredicted RBP5.29□□□□□ -1.56
RGPD1-202ENST00000409776 TEX35Q5T0J7 233 aa5.29□□□□□ -1.56
RGPD1-202ENST00000409776 TCHPQ9BT92 498 aa5.28□□□□□ -1.56
RGPD1-202ENST00000409776 PLCD4Q9BRC7 762 aa5.28□□□□□ -1.56
RGPD1-202ENST00000409776 USP8P40818 1118 aa5.27□□□□□ -1.57
RGPD1-202ENST00000409776 GPS2Q13227 327 aa5.27□□□□□ -1.57
RGPD1-202ENST00000409776 CCAR1Q8IX12 1150 aaKnown RBP5.27□□□□□ -1.57
RGPD1-202ENST00000409776 TRIM63Q969Q1 353 aa5.27□□□□□ -1.57
RGPD1-202ENST00000409776 PLCB2Q00722 1185 aa5.27□□□□□ -1.57
RGPD1-202ENST00000409776 CSRNP3Q8WYN3 585 aa5.27□□□□□ -1.57
RGPD1-202ENST00000409776 RDXP35241 583 aaKnown RBP5.26□□□□□ -1.57
RGPD1-202ENST00000409776 AK7Q96M32 723 aa5.26□□□□□ -1.57
RGPD1-202ENST00000409776 PDCL3Q9H2J4 239 aa5.26□□□□□ -1.57
RGPD1-202ENST00000409776 ZBTB22O15209 634 aa5.26□□□□□ -1.57
RGPD1-202ENST00000409776 HMMRO75330 724 aa5.26□□□□□ -1.57
RGPD1-202ENST00000409776 HSP90AB3PQ58FF7 597 aa5.26□□□□□ -1.57
RGPD1-202ENST00000409776 RASSF8Q8NHQ8 419 aa5.26□□□□□ -1.57
RGPD1-202ENST00000409776 VGFO15240 615 aaPredicted RBP5.25□□□□□ -1.57
RGPD1-202ENST00000409776 FBXO3Q9UK99 471 aa5.25□□□□□ -1.57
RGPD1-202ENST00000409776 PHF14O94880 888 aa5.25□□□□□ -1.57
RGPD1-202ENST00000409776 WDR78Q5VTH9 848 aa5.25□□□□□ -1.57
RGPD1-202ENST00000409776 DIEXFQ68CQ4 756 aaKnown RBP5.25□□□□□ -1.57
RGPD1-202ENST00000409776 CCDC191Q8NCU4 936 aa5.25□□□□□ -1.57
RGPD1-202ENST00000409776 NOP58Q9Y2X3 529 aaKnown RBP5.25□□□□□ -1.57
RGPD1-202ENST00000409776 MNS1Q8NEH6 495 aa5.25□□□□□ -1.57
RGPD1-202ENST00000409776 FYB1O15117 783 aa5.24□□□□□ -1.57
RGPD1-202ENST00000409776 PDIA4P13667 645 aaKnown RBP5.24□□□□□ -1.57
RGPD1-202ENST00000409776 RBM25P49756 843 aaKnown RBP5.24□□□□□ -1.57
RGPD1-202ENST00000409776 DDRGK1Q96HY6 314 aa5.24□□□□□ -1.57
RGPD1-202ENST00000409776 PPP4R4Q6NUP7 873 aa5.24□□□□□ -1.57
RGPD1-202ENST00000409776 CREBRFQ8IUR6 639 aa5.24□□□□□ -1.57
RGPD1-202ENST00000409776 KIAA2012Q0VF49 1180 aa5.24□□□□□ -1.57
RGPD1-202ENST00000409776 SUDS3Q9H7L9 328 aaPredicted RBP5.24□□□□□ -1.57
RGPD1-202ENST00000409776 CASC1Q6TDU7 716 aa5.23□□□□□ -1.57
RGPD1-202ENST00000409776 BECN1Q14457 450 aa5.23□□□□□ -1.57
RGPD1-202ENST00000409776 PAIP2Q9BPZ3 127 aaKnown RBP5.23□□□□□ -1.57
RGPD1-202ENST00000409776 KIF20AO95235 890 aa5.23□□□□□ -1.57
RGPD1-202ENST00000409776 NEXNQ0ZGT2 675 aa5.23□□□□□ -1.57
RGPD1-202ENST00000409776 RSPH6AQ9H0K4 717 aa5.22□□□□□ -1.57
RGPD1-202ENST00000409776 TCERG1O14776 1098 aaKnown RBP5.21□□□□□ -1.57
RGPD1-202ENST00000409776 RSPH4AQ5TD94 716 aa5.21□□□□□ -1.57
RGPD1-202ENST00000409776 PIK3R5Q8WYR1 880 aa5.21□□□□□ -1.57
RGPD1-202ENST00000409776 TMCO5BA8MYB1 307 aa5.21□□□□□ -1.58
RGPD1-202ENST00000409776 CC2D1BQ5T0F9 858 aaKnown RBP5.21□□□□□ -1.58
RGPD1-202ENST00000409776 WWC1Q8IX03 1113 aa5.21□□□□□ -1.58
RGPD1-202ENST00000409776 DRC7Q8IY82 874 aa5.21□□□□□ -1.58
RGPD1-202ENST00000409776 MKL2Q9ULH7 1088 aa5.21□□□□□ -1.58
RGPD1-202ENST00000409776 CCDC175P0C221 793 aa5.2□□□□□ -1.58
RGPD1-202ENST00000409776 NPHP1O15259 732 aa5.2□□□□□ -1.58
RGPD1-202ENST00000409776 SH3BGRP55822 239 aaPredicted RBP5.2□□□□□ -1.58
RGPD1-202ENST00000409776 FKBP8Q14318 412 aa5.2□□□□□ -1.58
RGPD1-202ENST00000409776 DZIP1Q86YF9 867 aaKnown RBP5.2□□□□□ -1.58
RGPD1-202ENST00000409776 DNAI2Q9GZS0 605 aa5.2□□□□□ -1.58
RGPD1-202ENST00000409776 CCDC66A2RUB6 948 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms