RNA–Protein interactions for RNA: ENST00000406875.7

HIPK2-202, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIPK2, Length 15,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-202ENST00000406875 HMGB2P26583 209 aaKnown RBP8.75□□□□□ -1.01
HIPK2-202ENST00000406875 ARID4BQ4LE39 1312 aaPredicted RBP8.75□□□□□ -1.01
HIPK2-202ENST00000406875 PNNQ9H307 717 aaKnown RBP8.74□□□□□ -1.01
HIPK2-202ENST00000406875 DIEXFQ68CQ4 756 aaKnown RBP8.74□□□□□ -1.01
HIPK2-202ENST00000406875 TSPY4P0CV99 314 aa8.74□□□□□ -1.01
HIPK2-202ENST00000406875 TSPY10P0CW01 314 aa8.74□□□□□ -1.01
HIPK2-202ENST00000406875 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
HIPK2-202ENST00000406875 HAP1P54257 671 aaPredicted RBP8.73□□□□□ -1.01
HIPK2-202ENST00000406875 VSIG10Q8N0Z9 540 aa8.72□□□□□ -1.01
HIPK2-202ENST00000406875 FAM50AQ14320 339 aaKnown RBP8.7□□□□□ -1.02
HIPK2-202ENST00000406875 HMGB1P1B2RPK0 211 aaPredicted RBP8.7□□□□□ -1.02
HIPK2-202ENST00000406875 APPP05067 770 aa8.7□□□□□ -1.02
HIPK2-202ENST00000406875 HSP90AA2PQ14568 343 aaPredicted RBP8.7□□□□□ -1.02
HIPK2-202ENST00000406875 FBLN2P98095 1184 aa8.69□□□□□ -1.02
HIPK2-202ENST00000406875 DEKP35659 375 aaKnown RBP8.66□□□□□ -1.02
HIPK2-202ENST00000406875 HSP90AA1P07900 732 aaKnown RBP8.66□□□□□ -1.02
HIPK2-202ENST00000406875 CANXP27824 592 aaKnown RBP8.66□□□□□ -1.02
HIPK2-202ENST00000406875 TAF3Q5VWG9 929 aa8.65□□□□□ -1.02
HIPK2-202ENST00000406875 CHIC1Q5VXU3 224 aa8.65□□□□□ -1.02
HIPK2-202ENST00000406875 NEUROD1Q13562 356 aa8.65□□□□□ -1.03
HIPK2-202ENST00000406875 CLSTN1O94985 981 aa8.64□□□□□ -1.03
HIPK2-202ENST00000406875 KLHL34Q8N239 644 aa8.64□□□□□ -1.03
HIPK2-202ENST00000406875 MS4A1P11836 297 aa8.63□□□□□ -1.03
HIPK2-202ENST00000406875 MTERF4Q7Z6M4 381 aaKnown RBP8.63□□□□□ -1.03
HIPK2-202ENST00000406875 HDAC5Q9UQL6 1122 aa8.63□□□□□ -1.03
HIPK2-202ENST00000406875 CLGNO14967 610 aa8.63□□□□□ -1.03
HIPK2-202ENST00000406875 PSMD1Q99460 953 aa8.62□□□□□ -1.03
HIPK2-202ENST00000406875 FOXD1Q16676 465 aa8.62□□□□□ -1.03
HIPK2-202ENST00000406875 USP35Q9P2H5 1018 aa8.62□□□□□ -1.03
HIPK2-202ENST00000406875 CHMP7Q8WUX9 453 aaPredicted RBP8.61□□□□□ -1.03
HIPK2-202ENST00000406875 MYH16Q9H6N6 1097 aa8.61□□□□□ -1.03
HIPK2-202ENST00000406875 ITGAEP38570 1179 aa8.6□□□□□ -1.03
HIPK2-202ENST00000406875 AXDND1Q5T1B0 1012 aaPredicted RBP8.6□□□□□ -1.03
HIPK2-202ENST00000406875 ZBTB7CA1YPR0 619 aa8.6□□□□□ -1.03
HIPK2-202ENST00000406875 RRP9O43818 475 aaKnown RBP8.6□□□□□ -1.03
HIPK2-202ENST00000406875 PLEKHD1A6NEE1 506 aa8.59□□□□□ -1.03
HIPK2-202ENST00000406875 FGD1P98174 961 aa8.59□□□□□ -1.03
HIPK2-202ENST00000406875 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
HIPK2-202ENST00000406875 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
HIPK2-202ENST00000406875 A0A0U1RQG5 324 aaPredicted RBP8.58□□□□□ -1.04
HIPK2-202ENST00000406875 MAP7D2Q96T17 732 aa8.58□□□□□ -1.04
HIPK2-202ENST00000406875 RSF1Q96T23 1441 aaPredicted RBP8.57□□□□□ -1.04
HIPK2-202ENST00000406875 PLEKHG5O94827 1062 aa8.56□□□□□ -1.04
HIPK2-202ENST00000406875 CASC1Q6TDU7 716 aa8.56□□□□□ -1.04
HIPK2-202ENST00000406875 NUDCQ9Y266 331 aa8.56□□□□□ -1.04
HIPK2-202ENST00000406875 L1TD1Q5T7N2 865 aaKnown RBP8.55□□□□□ -1.04
HIPK2-202ENST00000406875 CFAP53Q96M91 514 aa8.54□□□□□ -1.04
HIPK2-202ENST00000406875 RSPH4AQ5TD94 716 aa8.54□□□□□ -1.04
HIPK2-202ENST00000406875 SETQ01105 290 aaPredicted RBP8.54□□□□□ -1.04
HIPK2-202ENST00000406875 WWC1Q8IX03 1113 aa8.54□□□□□ -1.04
HIPK2-202ENST00000406875 PLCD4Q9BRC7 762 aa8.54□□□□□ -1.04
HIPK2-202ENST00000406875 TMX4Q9H1E5 349 aaPredicted RBP8.53□□□□□ -1.04
HIPK2-202ENST00000406875 NBR1Q14596 966 aa8.53□□□□□ -1.04
HIPK2-202ENST00000406875 CHMP4CQ96CF2 233 aa8.53□□□□□ -1.04
HIPK2-202ENST00000406875 PPARGC1BQ86YN6 1023 aaKnown RBP8.52□□□□□ -1.04
HIPK2-202ENST00000406875 TNNT3P45378 269 aaPredicted RBP8.52□□□□□ -1.05
HIPK2-202ENST00000406875 PABPN1Q86U42 306 aaKnown RBP eCLIP8.52□□□□□ -1.05
HIPK2-202ENST00000406875 GOLGA6L3A6NEY3 463 aa8.51□□□□□ -1.05
HIPK2-202ENST00000406875 ZMYND15Q9H091 742 aa8.51□□□□□ -1.05
HIPK2-202ENST00000406875 GOLGA6L22H0YM25 854 aa8.51□□□□□ -1.05
HIPK2-202ENST00000406875 DNTTIP2Q5QJE6 756 aaKnown RBP8.51□□□□□ -1.05
HIPK2-202ENST00000406875 CCDC136Q96JN2 1154 aa8.51□□□□□ -1.05
HIPK2-202ENST00000406875 STAC3Q96MF2 364 aa8.5□□□□□ -1.05
HIPK2-202ENST00000406875 WDR43Q15061 677 aaKnown RBP eCLIP8.5□□□□□ -1.05
HIPK2-202ENST00000406875 NRDCO43847 1150 aa8.49□□□□□ -1.05
HIPK2-202ENST00000406875 EEA1Q15075 1411 aa8.48□□□□□ -1.05
HIPK2-202ENST00000406875 TSPYL1Q9H0U9 437 aa8.48□□□□□ -1.05
HIPK2-202ENST00000406875 TMC1Q8TDI8 760 aa8.48□□□□□ -1.05
HIPK2-202ENST00000406875 ZNF622Q969S3 477 aaKnown RBP eCLIP8.47□□□□□ -1.052e-6■■□□□ 12.9
HIPK2-202ENST00000406875 CALD1Q05682 793 aaKnown RBP8.47□□□□□ -1.05
HIPK2-202ENST00000406875 BECN1Q14457 450 aa8.47□□□□□ -1.05
HIPK2-202ENST00000406875 SSR1P43307 286 aaKnown RBP8.46□□□□□ -1.06
HIPK2-202ENST00000406875 ZRSR1Q15695 479 aaKnown RBP8.46□□□□□ -1.06
HIPK2-202ENST00000406875 PLCB2Q00722 1185 aa8.45□□□□□ -1.06
HIPK2-202ENST00000406875 GOLGA6L6A8MZA4 724 aa8.45□□□□□ -1.06
HIPK2-202ENST00000406875 PATL2C9JE40 543 aaKnown RBP8.44□□□□□ -1.06
HIPK2-202ENST00000406875 CCDC34Q96HJ3 373 aa8.44□□□□□ -1.06
HIPK2-202ENST00000406875 DDRGK1Q96HY6 314 aa8.44□□□□□ -1.06
HIPK2-202ENST00000406875 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
HIPK2-202ENST00000406875 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.42□□□□□ -1.06
HIPK2-202ENST00000406875 PPP1R15AO75807 674 aaPredicted RBP8.42□□□□□ -1.06
HIPK2-202ENST00000406875 CHGAP10645 457 aaKnown RBP8.42□□□□□ -1.06
HIPK2-202ENST00000406875 RBM28Q9NW13 759 aaKnown RBP8.41□□□□□ -1.06
HIPK2-202ENST00000406875 TONSLQ96HA7 1378 aa8.41□□□□□ -1.06
HIPK2-202ENST00000406875 MCCP23508 829 aa8.41□□□□□ -1.06
HIPK2-202ENST00000406875 CC2D1BQ5T0F9 858 aaKnown RBP8.41□□□□□ -1.06
HIPK2-202ENST00000406875 FANCIQ9NVI1 1328 aa8.4□□□□□ -1.06
HIPK2-202ENST00000406875 BBXQ8WY36 941 aaPredicted RBP8.39□□□□□ -1.07
HIPK2-202ENST00000406875 RBM10P98175 930 aaKnown RBP8.39□□□□□ -1.07
HIPK2-202ENST00000406875 KANK1Q14678 1352 aa8.38□□□□□ -1.07
HIPK2-202ENST00000406875 NOP58Q9Y2X3 529 aaKnown RBP8.38□□□□□ -1.07
HIPK2-202ENST00000406875 KNSTRNQ9Y448 316 aa8.38□□□□□ -1.07
HIPK2-202ENST00000406875 DCAF8L1A6NGE4 600 aa8.38□□□□□ -1.07
HIPK2-202ENST00000406875 NAP1L2Q9ULW6 460 aaPredicted RBP8.37□□□□□ -1.07
HIPK2-202ENST00000406875 NPHP1O15259 732 aa8.36□□□□□ -1.07
HIPK2-202ENST00000406875 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.36□□□□□ -1.07
HIPK2-202ENST00000406875 WASHC2AQ641Q2 1341 aa8.36□□□□□ -1.07
HIPK2-202ENST00000406875 RBM19Q9Y4C8 960 aaKnown RBP8.35□□□□□ -1.07
HIPK2-202ENST00000406875 HTATSF1O43719 755 aaKnown RBP8.35□□□□□ -1.07
HIPK2-202ENST00000406875 MTUS2Q5JR59 1369 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms