RNA–Protein interactions for RNA: ENST00000398809.8

CDH23-205, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-205ENST00000398809 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
CDH23-205ENST00000398809 SOGA1O94964 1423 aa23.15■■□□□ 1.3
CDH23-205ENST00000398809 NACADO15069 1562 aa23.13■■□□□ 1.29
CDH23-205ENST00000398809 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
CDH23-205ENST00000398809 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
CDH23-205ENST00000398809 NBR1Q14596 966 aa23.1■■□□□ 1.29
CDH23-205ENST00000398809 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
CDH23-205ENST00000398809 WDR43Q15061 677 aaKnown RBP eCLIP23.06■■□□□ 1.28
CDH23-205ENST00000398809 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
CDH23-205ENST00000398809 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
CDH23-205ENST00000398809 SUPT16HQ9Y5B9 1047 aaKnown RBP23.03■■□□□ 1.28
CDH23-205ENST00000398809 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
CDH23-205ENST00000398809 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
CDH23-205ENST00000398809 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
CDH23-205ENST00000398809 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
CDH23-205ENST00000398809 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
CDH23-205ENST00000398809 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.97■■□□□ 1.27
CDH23-205ENST00000398809 CFDP1Q9UEE9 299 aaPredicted RBP22.96■■□□□ 1.27
CDH23-205ENST00000398809 CCNB3Q8WWL7 1395 aa22.96■■□□□ 1.27
CDH23-205ENST00000398809 HSP90AA1P07900 732 aaKnown RBP22.95■■□□□ 1.26
CDH23-205ENST00000398809 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
CDH23-205ENST00000398809 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
CDH23-205ENST00000398809 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
CDH23-205ENST00000398809 KANK4Q5T7N3 995 aaPredicted RBP22.9■■□□□ 1.26
CDH23-205ENST00000398809 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
CDH23-205ENST00000398809 EIF5BO60841 1220 aaKnown RBP22.86■■□□□ 1.25
CDH23-205ENST00000398809 CARD11Q9BXL7 1154 aa22.86■■□□□ 1.25
CDH23-205ENST00000398809 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
CDH23-205ENST00000398809 CARMIL1Q5VZK9 1371 aa22.83■■□□□ 1.25
CDH23-205ENST00000398809 VPS8Q8N3P4 1428 aa22.83■■□□□ 1.24
CDH23-205ENST00000398809 ARXQ96QS3 562 aa22.8■■□□□ 1.24
CDH23-205ENST00000398809 CUX2O14529 1486 aa22.78■■□□□ 1.24
CDH23-205ENST00000398809 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
CDH23-205ENST00000398809 ANP32EQ9BTT0 268 aa22.71■■□□□ 1.23
CDH23-205ENST00000398809 KNSTRNQ9Y448 316 aa22.71■■□□□ 1.23
CDH23-205ENST00000398809 ANP32BQ92688 251 aaKnown RBP22.71■■□□□ 1.23
CDH23-205ENST00000398809 PPP4R2Q9NY27 417 aa22.7■■□□□ 1.22
CDH23-205ENST00000398809 B4GALNT3Q6L9W6 998 aa22.69■■□□□ 1.22
CDH23-205ENST00000398809 TIMELESSQ9UNS1 1208 aa22.69■■□□□ 1.22
CDH23-205ENST00000398809 SETD5Q9C0A6 1442 aa22.67■■□□□ 1.22
CDH23-205ENST00000398809 NEUROD2Q15784 382 aa22.65■■□□□ 1.22
CDH23-205ENST00000398809 FOXD1Q16676 465 aa22.64■■□□□ 1.21
CDH23-205ENST00000398809 DCAF11Q8TEB1 546 aa22.61■■□□□ 1.21
CDH23-205ENST00000398809 RAB3GAP2Q9H2M9 1393 aa22.61■■□□□ 1.21
CDH23-205ENST00000398809 HSPA5P11021 654 aaKnown RBP22.61■■□□□ 1.21
CDH23-205ENST00000398809 CDCA8Q53HL2 280 aa22.61■■□□□ 1.21
CDH23-205ENST00000398809 CC2D1BQ5T0F9 858 aaKnown RBP22.61■■□□□ 1.21
CDH23-205ENST00000398809 CCER2I3L3R5 266 aa22.59■■□□□ 1.21
CDH23-205ENST00000398809 PPM1GO15355 546 aaPredicted RBP22.54■■□□□ 1.2
CDH23-205ENST00000398809 TNNT2P45379 298 aaPredicted RBP22.54■■□□□ 1.2
CDH23-205ENST00000398809 DDRGK1Q96HY6 314 aa22.54■■□□□ 1.2
CDH23-205ENST00000398809 CFAP53Q96M91 514 aa22.54■■□□□ 1.2
CDH23-205ENST00000398809 RGS3P49796 1198 aa22.53■■□□□ 1.2
CDH23-205ENST00000398809 PPP1R15AO75807 674 aaPredicted RBP22.53■■□□□ 1.2
CDH23-205ENST00000398809 MYH16Q9H6N6 1097 aa22.53■■□□□ 1.2
CDH23-205ENST00000398809 WIZO95785 1651 aa22.52■■□□□ 1.2
CDH23-205ENST00000398809 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
CDH23-205ENST00000398809 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
CDH23-205ENST00000398809 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
CDH23-205ENST00000398809 PKD2Q13563 968 aa22.49■■□□□ 1.19
CDH23-205ENST00000398809 BECN1Q14457 450 aa22.49■■□□□ 1.19
CDH23-205ENST00000398809 LAS1LQ9Y4W2 734 aaKnown RBP22.49■■□□□ 1.19
CDH23-205ENST00000398809 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
CDH23-205ENST00000398809 FRAT1Q92837 279 aaPredicted RBP22.47■■□□□ 1.19
CDH23-205ENST00000398809 RBM19Q9Y4C8 960 aaKnown RBP22.47■■□□□ 1.19
CDH23-205ENST00000398809 RUSC2Q8N2Y8 1516 aa22.45■■□□□ 1.18
CDH23-205ENST00000398809 MPHOSPH9Q99550 1183 aa22.45■■□□□ 1.18
CDH23-205ENST00000398809 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
CDH23-205ENST00000398809 FTSJ3Q8IY81 847 aaKnown RBP22.43■■□□□ 1.18
CDH23-205ENST00000398809 TMF1P82094 1093 aa22.42■■□□□ 1.18
CDH23-205ENST00000398809 NOP58Q9Y2X3 529 aaKnown RBP22.42■■□□□ 1.18
CDH23-205ENST00000398809 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
CDH23-205ENST00000398809 ZBTB7CA1YPR0 619 aa22.39■■□□□ 1.18
CDH23-205ENST00000398809 TOP2AP11388 1531 aaKnown RBP22.39■■□□□ 1.17
CDH23-205ENST00000398809 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
CDH23-205ENST00000398809 MAPK8IP3Q9UPT6 1336 aa22.36■■□□□ 1.17
CDH23-205ENST00000398809 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
CDH23-205ENST00000398809 U2SURPO15042 1029 aaKnown RBP22.34■■□□□ 1.17
CDH23-205ENST00000398809 POGKQ9P215 609 aa22.34■■□□□ 1.17
CDH23-205ENST00000398809 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
CDH23-205ENST00000398809 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
CDH23-205ENST00000398809 DHX57Q6P158 1386 aaKnown RBP22.33■■□□□ 1.16
CDH23-205ENST00000398809 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.16
CDH23-205ENST00000398809 FMN1Q68DA7 1419 aa22.32■■□□□ 1.16
CDH23-205ENST00000398809 TSHZ2Q9NRE2 1034 aa22.31■■□□□ 1.16
CDH23-205ENST00000398809 NUP155O75694 1391 aa22.29■■□□□ 1.16
CDH23-205ENST00000398809 SAFB2Q14151 953 aaKnown RBP eCLIP22.26■■□□□ 1.15
CDH23-205ENST00000398809 RTN4Q9NQC3 1192 aaKnown RBP22.25■■□□□ 1.15
CDH23-205ENST00000398809 ARID4BQ4LE39 1312 aaPredicted RBP22.24■■□□□ 1.15
CDH23-205ENST00000398809 NCLP19338 710 aaKnown RBP22.23■■□□□ 1.15
CDH23-205ENST00000398809 GOLGA6L22H0YM25 854 aa22.23■■□□□ 1.15
CDH23-205ENST00000398809 TRIM44Q96DX7 344 aaPredicted RBP22.22■■□□□ 1.15
CDH23-205ENST00000398809 RCAN3Q9UKA8 241 aa22.21■■□□□ 1.15
CDH23-205ENST00000398809 KTN1Q86UP2 1357 aaKnown RBP22.21■■□□□ 1.15
CDH23-205ENST00000398809 MORC1Q86VD1 984 aa22.21■■□□□ 1.15
CDH23-205ENST00000398809 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
CDH23-205ENST00000398809 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
CDH23-205ENST00000398809 GGT6Q6P531 493 aa22.19■■□□□ 1.14
CDH23-205ENST00000398809 A0A0G2JS52 829 aa22.18■■□□□ 1.14
CDH23-205ENST00000398809 ERICH6BQ5W0A0 696 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms