RNA–Protein interactions for RNA: ENST00000398809.8

CDH23-205, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,533 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-205ENST00000398809 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
CDH23-205ENST00000398809 SOGA1O94964 1423 aa23.15■■□□□ 1.3
CDH23-205ENST00000398809 NACADO15069 1562 aa23.13■■□□□ 1.29
CDH23-205ENST00000398809 BAZ1BQ9UIG0 1483 aaKnown RBP23.13■■□□□ 1.29
CDH23-205ENST00000398809 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
CDH23-205ENST00000398809 NBR1Q14596 966 aa23.1■■□□□ 1.29
CDH23-205ENST00000398809 STAG3Q9UJ98 1225 aa23.06■■□□□ 1.28
CDH23-205ENST00000398809 WDR43Q15061 677 aaKnown RBP eCLIP23.06■■□□□ 1.28
CDH23-205ENST00000398809 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
CDH23-205ENST00000398809 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
CDH23-205ENST00000398809 SUPT16HQ9Y5B9 1047 aaKnown RBP23.03■■□□□ 1.28
CDH23-205ENST00000398809 NPM1P06748 294 aaKnown RBP eCLIP23.02■■□□□ 1.28
CDH23-205ENST00000398809 ESF1Q9H501 851 aaKnown RBP22.98■■□□□ 1.27
CDH23-205ENST00000398809 PLEKHD1A6NEE1 506 aa22.98■■□□□ 1.27
CDH23-205ENST00000398809 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
CDH23-205ENST00000398809 UPF2Q9HAU5 1272 aaKnown RBP22.97■■□□□ 1.27
CDH23-205ENST00000398809 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.97■■□□□ 1.27
CDH23-205ENST00000398809 CFDP1Q9UEE9 299 aaPredicted RBP22.96■■□□□ 1.27
CDH23-205ENST00000398809 CCNB3Q8WWL7 1395 aa22.96■■□□□ 1.27
CDH23-205ENST00000398809 HSP90AA1P07900 732 aaKnown RBP22.95■■□□□ 1.26
CDH23-205ENST00000398809 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
CDH23-205ENST00000398809 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
CDH23-205ENST00000398809 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
CDH23-205ENST00000398809 KANK4Q5T7N3 995 aaPredicted RBP22.9■■□□□ 1.26
CDH23-205ENST00000398809 CCDC88BA6NC98 1476 aa22.88■■□□□ 1.25
CDH23-205ENST00000398809 EIF5BO60841 1220 aaKnown RBP22.86■■□□□ 1.25
CDH23-205ENST00000398809 CARD11Q9BXL7 1154 aa22.86■■□□□ 1.25
CDH23-205ENST00000398809 ABCC8Q09428 1581 aa22.86■■□□□ 1.25
CDH23-205ENST00000398809 CARMIL1Q5VZK9 1371 aa22.83■■□□□ 1.25
CDH23-205ENST00000398809 VPS8Q8N3P4 1428 aa22.83■■□□□ 1.24
CDH23-205ENST00000398809 ARXQ96QS3 562 aa22.8■■□□□ 1.24
CDH23-205ENST00000398809 CUX2O14529 1486 aa22.78■■□□□ 1.24
CDH23-205ENST00000398809 FHAD1B1AJZ9 1412 aa22.74■■□□□ 1.23
CDH23-205ENST00000398809 ANP32EQ9BTT0 268 aa22.71■■□□□ 1.23
CDH23-205ENST00000398809 KNSTRNQ9Y448 316 aa22.71■■□□□ 1.23
CDH23-205ENST00000398809 ANP32BQ92688 251 aaKnown RBP22.71■■□□□ 1.23
CDH23-205ENST00000398809 PPP4R2Q9NY27 417 aa22.7■■□□□ 1.22
CDH23-205ENST00000398809 B4GALNT3Q6L9W6 998 aa22.69■■□□□ 1.22
CDH23-205ENST00000398809 TIMELESSQ9UNS1 1208 aa22.69■■□□□ 1.22
CDH23-205ENST00000398809 SETD5Q9C0A6 1442 aa22.67■■□□□ 1.22
CDH23-205ENST00000398809 NEUROD2Q15784 382 aa22.65■■□□□ 1.22
CDH23-205ENST00000398809 FOXD1Q16676 465 aa22.64■■□□□ 1.21
CDH23-205ENST00000398809 DCAF11Q8TEB1 546 aa22.61■■□□□ 1.21
CDH23-205ENST00000398809 RAB3GAP2Q9H2M9 1393 aa22.61■■□□□ 1.21
CDH23-205ENST00000398809 HSPA5P11021 654 aaKnown RBP22.61■■□□□ 1.21
CDH23-205ENST00000398809 CDCA8Q53HL2 280 aa22.61■■□□□ 1.21
CDH23-205ENST00000398809 CC2D1BQ5T0F9 858 aaKnown RBP22.61■■□□□ 1.21
CDH23-205ENST00000398809 CCER2I3L3R5 266 aa22.59■■□□□ 1.21
CDH23-205ENST00000398809 PPM1GO15355 546 aaPredicted RBP22.54■■□□□ 1.2
CDH23-205ENST00000398809 TNNT2P45379 298 aaPredicted RBP22.54■■□□□ 1.2
CDH23-205ENST00000398809 DDRGK1Q96HY6 314 aa22.54■■□□□ 1.2
CDH23-205ENST00000398809 CFAP53Q96M91 514 aa22.54■■□□□ 1.2
CDH23-205ENST00000398809 RGS3P49796 1198 aa22.53■■□□□ 1.2
CDH23-205ENST00000398809 PPP1R15AO75807 674 aaPredicted RBP22.53■■□□□ 1.2
CDH23-205ENST00000398809 MYH16Q9H6N6 1097 aa22.53■■□□□ 1.2
CDH23-205ENST00000398809 WIZO95785 1651 aa22.52■■□□□ 1.2
CDH23-205ENST00000398809 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
CDH23-205ENST00000398809 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
CDH23-205ENST00000398809 ARHGAP35Q9NRY4 1499 aa22.5■■□□□ 1.19
CDH23-205ENST00000398809 PKD2Q13563 968 aa22.49■■□□□ 1.19
CDH23-205ENST00000398809 BECN1Q14457 450 aa22.49■■□□□ 1.19
CDH23-205ENST00000398809 LAS1LQ9Y4W2 734 aaKnown RBP22.49■■□□□ 1.19
CDH23-205ENST00000398809 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
CDH23-205ENST00000398809 FRAT1Q92837 279 aaPredicted RBP22.47■■□□□ 1.19
CDH23-205ENST00000398809 RBM19Q9Y4C8 960 aaKnown RBP22.47■■□□□ 1.19
CDH23-205ENST00000398809 RUSC2Q8N2Y8 1516 aa22.45■■□□□ 1.18
CDH23-205ENST00000398809 MPHOSPH9Q99550 1183 aa22.45■■□□□ 1.18
CDH23-205ENST00000398809 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
CDH23-205ENST00000398809 FTSJ3Q8IY81 847 aaKnown RBP22.43■■□□□ 1.18
CDH23-205ENST00000398809 TMF1P82094 1093 aa22.42■■□□□ 1.18
CDH23-205ENST00000398809 NOP58Q9Y2X3 529 aaKnown RBP22.42■■□□□ 1.18
CDH23-205ENST00000398809 C14orf37Q86TY3 774 aa22.4■■□□□ 1.18
CDH23-205ENST00000398809 ZBTB7CA1YPR0 619 aa22.39■■□□□ 1.18
CDH23-205ENST00000398809 TOP2AP11388 1531 aaKnown RBP22.39■■□□□ 1.17
CDH23-205ENST00000398809 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
CDH23-205ENST00000398809 MAPK8IP3Q9UPT6 1336 aa22.36■■□□□ 1.17
CDH23-205ENST00000398809 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
CDH23-205ENST00000398809 U2SURPO15042 1029 aaKnown RBP22.34■■□□□ 1.17
CDH23-205ENST00000398809 POGKQ9P215 609 aa22.34■■□□□ 1.17
CDH23-205ENST00000398809 NUDCQ9Y266 331 aa22.34■■□□□ 1.17
CDH23-205ENST00000398809 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
CDH23-205ENST00000398809 DHX57Q6P158 1386 aaKnown RBP22.33■■□□□ 1.16
CDH23-205ENST00000398809 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.16
CDH23-205ENST00000398809 FMN1Q68DA7 1419 aa22.32■■□□□ 1.16
CDH23-205ENST00000398809 TSHZ2Q9NRE2 1034 aa22.31■■□□□ 1.16
CDH23-205ENST00000398809 NUP155O75694 1391 aa22.29■■□□□ 1.16
CDH23-205ENST00000398809 SAFB2Q14151 953 aaKnown RBP eCLIP22.26■■□□□ 1.15
CDH23-205ENST00000398809 RTN4Q9NQC3 1192 aaKnown RBP22.25■■□□□ 1.15
CDH23-205ENST00000398809 ARID4BQ4LE39 1312 aaPredicted RBP22.24■■□□□ 1.15
CDH23-205ENST00000398809 NCLP19338 710 aaKnown RBP22.23■■□□□ 1.15
CDH23-205ENST00000398809 GOLGA6L22H0YM25 854 aa22.23■■□□□ 1.15
CDH23-205ENST00000398809 TRIM44Q96DX7 344 aaPredicted RBP22.22■■□□□ 1.15
CDH23-205ENST00000398809 RCAN3Q9UKA8 241 aa22.21■■□□□ 1.15
CDH23-205ENST00000398809 KTN1Q86UP2 1357 aaKnown RBP22.21■■□□□ 1.15
CDH23-205ENST00000398809 MORC1Q86VD1 984 aa22.21■■□□□ 1.15
CDH23-205ENST00000398809 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
CDH23-205ENST00000398809 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
CDH23-205ENST00000398809 GGT6Q6P531 493 aa22.19■■□□□ 1.14
CDH23-205ENST00000398809 A0A0G2JS52 829 aa22.18■■□□□ 1.14
CDH23-205ENST00000398809 ERICH6BQ5W0A0 696 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms