RNA–Protein interactions for RNA: ENST00000395813.5

CAST-207, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-207ENST00000395813 CENPBP07199 599 aaPredicted RBP7.18□□□□□ -1.26
CAST-207ENST00000395813 PPP6R1Q9UPN7 881 aa7.17□□□□□ -1.26
CAST-207ENST00000395813 NAP1L5Q96NT1 182 aaPredicted RBP7.16□□□□□ -1.26
CAST-207ENST00000395813 FOXD4L5Q5VV16 416 aaPredicted RBP7.13□□□□□ -1.27
CAST-207ENST00000395813 FOXD4L4Q8WXT5 416 aaPredicted RBP7.13□□□□□ -1.27
CAST-207ENST00000395813 RSPH6AQ9H0K4 717 aa7.12□□□□□ -1.27
CAST-207ENST00000395813 ZNF428Q96B54 188 aa7.12□□□□□ -1.27
CAST-207ENST00000395813 PSMD1Q99460 953 aa7.12□□□□□ -1.27
CAST-207ENST00000395813 BBXQ8WY36 941 aaPredicted RBP7.1□□□□□ -1.27
CAST-207ENST00000395813 ZNF592Q92610 1267 aa7.1□□□□□ -1.27
CAST-207ENST00000395813 APBB1O00213 710 aa7.1□□□□□ -1.27
CAST-207ENST00000395813 TRHP20396 242 aaPredicted RBP7.08□□□□□ -1.28
CAST-207ENST00000395813 PUS7Q96PZ0 661 aaKnown RBP7.07□□□□□ -1.28
CAST-207ENST00000395813 BCCIPQ9P287 314 aaKnown RBP eCLIP7.07□□□□□ -1.28
CAST-207ENST00000395813 PTMSP20962 102 aa7.06□□□□□ -1.28
CAST-207ENST00000395813 CWC22Q9HCG8 908 aaKnown RBP7.06□□□□□ -1.28
CAST-207ENST00000395813 NECTIN2Q92692 538 aa7.05□□□□□ -1.28
CAST-207ENST00000395813 MTMR7Q9Y216 660 aa7.05□□□□□ -1.28
CAST-207ENST00000395813 CLSPNQ9HAW4 1339 aa7.04□□□□□ -1.28
CAST-207ENST00000395813 GLIPR1L2Q4G1C9 344 aa7.04□□□□□ -1.28
CAST-207ENST00000395813 TMCO4Q5TGY1 634 aa7.04□□□□□ -1.28
CAST-207ENST00000395813 ECM2O94769 699 aaPredicted RBP7.03□□□□□ -1.28
CAST-207ENST00000395813 ZMYND15Q9H091 742 aa7.03□□□□□ -1.28
CAST-207ENST00000395813 SENP3Q9H4L4 574 aaPredicted RBP7.03□□□□□ -1.28
CAST-207ENST00000395813 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.03□□□□□ -1.28
CAST-207ENST00000395813 FGD1P98174 961 aa7.02□□□□□ -1.29
CAST-207ENST00000395813 CHGAP10645 457 aaKnown RBP7.01□□□□□ -1.29
CAST-207ENST00000395813 ZFP91Q96JP5 570 aaPredicted RBP7.01□□□□□ -1.29
CAST-207ENST00000395813 BRPF1P55201 1214 aaPredicted RBP7.01□□□□□ -1.29
CAST-207ENST00000395813 NPM1P06748 294 aaKnown RBP eCLIP7.01□□□□□ -1.29
CAST-207ENST00000395813 CLSTN1O94985 981 aa7□□□□□ -1.29
CAST-207ENST00000395813 NCLP19338 710 aaKnown RBP7□□□□□ -1.29
CAST-207ENST00000395813 BRPF3Q9ULD4 1205 aa6.99□□□□□ -1.29
CAST-207ENST00000395813 E9PSI1 815 aa6.98□□□□□ -1.29
CAST-207ENST00000395813 PRDM10Q9NQV6 1147 aa6.98□□□□□ -1.29
CAST-207ENST00000395813 TRIM41Q8WV44 630 aa6.97□□□□□ -1.29
CAST-207ENST00000395813 WDR70Q9NW82 654 aa6.97□□□□□ -1.29
CAST-207ENST00000395813 PKD2Q13563 968 aa6.96□□□□□ -1.3
CAST-207ENST00000395813 FBXW7Q969H0 707 aa6.96□□□□□ -1.3
CAST-207ENST00000395813 ANO8Q9HCE9 1232 aaPredicted RBP6.96□□□□□ -1.3
CAST-207ENST00000395813 TICAM2Q86XR7 235 aa6.95□□□□□ -1.3
CAST-207ENST00000395813 GZF1Q9H116 711 aaPredicted RBP6.95□□□□□ -1.3
CAST-207ENST00000395813 FAM177A1Q8N128 213 aaPredicted RBP6.94□□□□□ -1.3
CAST-207ENST00000395813 VASPP50552 380 aaPredicted RBP6.93□□□□□ -1.3
CAST-207ENST00000395813 PIAS4Q8N2W9 510 aaPredicted RBP6.93□□□□□ -1.3
CAST-207ENST00000395813 MFAP1P55081 439 aaKnown RBP6.92□□□□□ -1.3
CAST-207ENST00000395813 CERS3Q8IU89 383 aa6.92□□□□□ -1.3
CAST-207ENST00000395813 PPP1R1BQ9UD71 204 aaPredicted RBP6.92□□□□□ -1.3
CAST-207ENST00000395813 YTHDC1Q96MU7 727 aaKnown RBP6.92□□□□□ -1.3
CAST-207ENST00000395813 PLCD4Q9BRC7 762 aa6.92□□□□□ -1.3
CAST-207ENST00000395813 C1orf115Q9H7X2 142 aa6.92□□□□□ -1.3
CAST-207ENST00000395813 LMOD2Q6P5Q4 547 aa6.91□□□□□ -1.3
CAST-207ENST00000395813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.91□□□□□ -1.3
CAST-207ENST00000395813 KDM4AO75164 1064 aa6.89□□□□□ -1.31
CAST-207ENST00000395813 IL27Q8NEV9 243 aa6.89□□□□□ -1.31
CAST-207ENST00000395813 RTL5Q5HYW3 569 aaPredicted RBP6.88□□□□□ -1.31
CAST-207ENST00000395813 CCDC82Q8N4S0 544 aa6.87□□□□□ -1.31
CAST-207ENST00000395813 OS9Q13438 667 aaPredicted RBP6.86□□□□□ -1.31
CAST-207ENST00000395813 IFNLR1Q8IU57 520 aaPredicted RBP6.86□□□□□ -1.31
CAST-207ENST00000395813 NOL8Q76FK4 1167 aaKnown RBP6.85□□□□□ -1.31
CAST-207ENST00000395813 SLC24A3Q9HC58 644 aa6.85□□□□□ -1.31
CAST-207ENST00000395813 TMED8Q6PL24 325 aaPredicted RBP6.84□□□□□ -1.31
CAST-207ENST00000395813 CNPY4Q8N129 248 aa6.84□□□□□ -1.31
CAST-207ENST00000395813 RSPH4AQ5TD94 716 aa6.84□□□□□ -1.31
CAST-207ENST00000395813 FAM50AQ14320 339 aaKnown RBP6.83□□□□□ -1.32
CAST-207ENST00000395813 WWC1Q8IX03 1113 aa6.83□□□□□ -1.32
CAST-207ENST00000395813 FAM9BQ8IZU0 186 aa6.83□□□□□ -1.32
CAST-207ENST00000395813 CCDC27Q2M243 656 aa6.82□□□□□ -1.32
CAST-207ENST00000395813 ATP1B4Q9UN42 357 aaPredicted RBP6.82□□□□□ -1.32
CAST-207ENST00000395813 RGL2O15211 777 aa6.82□□□□□ -1.32
CAST-207ENST00000395813 DEKP35659 375 aaKnown RBP6.82□□□□□ -1.32
CAST-207ENST00000395813 ZNF692Q9BU19 519 aaPredicted RBP6.82□□□□□ -1.32
CAST-207ENST00000395813 PATL2C9JE40 543 aaKnown RBP6.81□□□□□ -1.32
CAST-207ENST00000395813 SCAF1Q9H7N4 1312 aaKnown RBP6.8□□□□□ -1.32
CAST-207ENST00000395813 RBM10P98175 930 aaKnown RBP6.79□□□□□ -1.32
CAST-207ENST00000395813 ZNF316A6NFI3 1004 aaPredicted RBP6.78□□□□□ -1.32
CAST-207ENST00000395813 AAMPQ13685 434 aa6.78□□□□□ -1.32
CAST-207ENST00000395813 CCER1Q8TC90 406 aaPredicted RBP6.78□□□□□ -1.32
CAST-207ENST00000395813 ANAPC15P60006 121 aa6.78□□□□□ -1.32
CAST-207ENST00000395813 SMARCA5O60264 1052 aaPredicted RBP6.77□□□□□ -1.33
CAST-207ENST00000395813 CIZ1Q9ULV3 898 aaPredicted RBP6.77□□□□□ -1.33
CAST-207ENST00000395813 GPATCH11Q8N954 259 aa6.77□□□□□ -1.33
CAST-207ENST00000395813 GPBP1L1Q9HC44 474 aaPredicted RBP6.77□□□□□ -1.33
CAST-207ENST00000395813 PTMAP06454 111 aaKnown RBP6.76□□□□□ -1.33
CAST-207ENST00000395813 RGS22Q8NE09 1264 aa6.76□□□□□ -1.33
CAST-207ENST00000395813 CCDC97Q96F63 343 aaPredicted RBP6.76□□□□□ -1.33
CAST-207ENST00000395813 LAS1LQ9Y4W2 734 aaKnown RBP6.76□□□□□ -1.33
CAST-207ENST00000395813 ANP32EQ9BTT0 268 aa6.75□□□□□ -1.33
CAST-207ENST00000395813 PRDM16Q9HAZ2 1276 aa6.75□□□□□ -1.33
CAST-207ENST00000395813 FOSBP53539 338 aa6.73□□□□□ -1.33
CAST-207ENST00000395813 TEX2Q8IWB9 1127 aa6.72□□□□□ -1.33
CAST-207ENST00000395813 ZNF777Q9ULD5 760 aaPredicted RBP6.72□□□□□ -1.33
CAST-207ENST00000395813 SETQ01105 290 aaPredicted RBP6.71□□□□□ -1.34
CAST-207ENST00000395813 MKRN3Q13064 507 aaKnown RBP6.71□□□□□ -1.34
CAST-207ENST00000395813 NAP1L2Q9ULW6 460 aaPredicted RBP6.71□□□□□ -1.34
CAST-207ENST00000395813 NEFMP07197 916 aa6.69□□□□□ -1.34
CAST-207ENST00000395813 FOXD4L6Q3SYB3 417 aaPredicted RBP6.69□□□□□ -1.34
CAST-207ENST00000395813 FOXD4L3Q6VB84 417 aaPredicted RBP6.69□□□□□ -1.34
CAST-207ENST00000395813 CLUAP1Q96AJ1 413 aa6.69□□□□□ -1.34
CAST-207ENST00000395813 CC2D2BQ6DHV5 1058 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms