RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 HAP1P54257 671 aaPredicted RBP4.41□□□□□ -1.7
PHF3-202ENST00000393387 PATL2C9JE40 543 aaKnown RBP4.4□□□□□ -1.71
PHF3-202ENST00000393387 PTMSP20962 102 aa4.4□□□□□ -1.71
PHF3-202ENST00000393387 TAF7LQ5H9L4 462 aa4.4□□□□□ -1.71
PHF3-202ENST00000393387 CSRNP3Q8WYN3 585 aa4.4□□□□□ -1.71
PHF3-202ENST00000393387 USP35Q9P2H5 1018 aa4.4□□□□□ -1.71
PHF3-202ENST00000393387 PKNOX2Q96KN3 472 aa4.39□□□□□ -1.71
PHF3-202ENST00000393387 SENP3-EIF4A1A0A087X0R7 540 aa4.39□□□□□ -1.71
PHF3-202ENST00000393387 NISCHQ9Y2I1 1504 aa4.39□□□□□ -1.71
PHF3-202ENST00000393387 MAPK8IP2Q13387 824 aaPredicted RBP4.37□□□□□ -1.71
PHF3-202ENST00000393387 TRIM52Q96A61 297 aa4.37□□□□□ -1.71
PHF3-202ENST00000393387 FAM9BQ8IZU0 186 aa4.37□□□□□ -1.71
PHF3-202ENST00000393387 FBXO3Q9UK99 471 aa4.37□□□□□ -1.71
PHF3-202ENST00000393387 ZNF526Q8TF50 670 aaPredicted RBP4.37□□□□□ -1.71
PHF3-202ENST00000393387 HNRNPUQ00839 825 aaKnown RBP eCLIP4.36□□□□□ -1.71
PHF3-202ENST00000393387 SPRYD3Q8NCJ5 442 aa4.36□□□□□ -1.71
PHF3-202ENST00000393387 PDE4CQ08493 712 aa4.36□□□□□ -1.71
PHF3-202ENST00000393387 MSNP26038 577 aaKnown RBP4.35□□□□□ -1.71
PHF3-202ENST00000393387 NOP58Q9Y2X3 529 aaKnown RBP4.35□□□□□ -1.71
PHF3-202ENST00000393387 HSP90AA2PQ14568 343 aaPredicted RBP4.35□□□□□ -1.71
PHF3-202ENST00000393387 FAM50AQ14320 339 aaKnown RBP4.34□□□□□ -1.71
PHF3-202ENST00000393387 ANO8Q9HCE9 1232 aaPredicted RBP4.34□□□□□ -1.71
PHF3-202ENST00000393387 MEX3CQ5U5Q3 659 aaKnown RBP4.33□□□□□ -1.72
PHF3-202ENST00000393387 DDRGK1Q96HY6 314 aa4.33□□□□□ -1.72
PHF3-202ENST00000393387 NOC3LQ8WTT2 800 aaKnown RBP4.33□□□□□ -1.72
PHF3-202ENST00000393387 CHAF1AQ13111 956 aaPredicted RBP4.32□□□□□ -1.72
PHF3-202ENST00000393387 GOLGA6L22H0YM25 854 aa4.32□□□□□ -1.72
PHF3-202ENST00000393387 GZF1Q9H116 711 aaPredicted RBP4.32□□□□□ -1.72
PHF3-202ENST00000393387 ZRSR1Q15695 479 aaKnown RBP4.32□□□□□ -1.72
PHF3-202ENST00000393387 ZNF771Q7L3S4 317 aaPredicted RBP4.32□□□□□ -1.72
PHF3-202ENST00000393387 DRC7Q8IY82 874 aa4.32□□□□□ -1.72
PHF3-202ENST00000393387 BECN1Q14457 450 aa4.32□□□□□ -1.72
PHF3-202ENST00000393387 SETQ01105 290 aaPredicted RBP4.3□□□□□ -1.72
PHF3-202ENST00000393387 DHX37Q8IY37 1157 aaKnown RBP4.3□□□□□ -1.72
PHF3-202ENST00000393387 PNNQ9H307 717 aaKnown RBP4.3□□□□□ -1.72
PHF3-202ENST00000393387 BCL11BQ9C0K0 894 aaPredicted RBP4.3□□□□□ -1.72
PHF3-202ENST00000393387 PPM1GO15355 546 aaPredicted RBP4.29□□□□□ -1.72
PHF3-202ENST00000393387 CLSTN1O94985 981 aa4.29□□□□□ -1.72
PHF3-202ENST00000393387 HIRIP3Q9BW71 556 aaPredicted RBP4.29□□□□□ -1.72
PHF3-202ENST00000393387 GOLGA6L1Q8N7Z2 621 aa4.29□□□□□ -1.72
PHF3-202ENST00000393387 PRM3Q9NNZ6 103 aa4.29□□□□□ -1.72
PHF3-202ENST00000393387 GOLGA6L6A8MZA4 724 aa4.28□□□□□ -1.72
PHF3-202ENST00000393387 RBM25P49756 843 aaKnown RBP4.28□□□□□ -1.72
PHF3-202ENST00000393387 DDX10Q13206 875 aaKnown RBP4.28□□□□□ -1.72
PHF3-202ENST00000393387 PLCD4Q9BRC7 762 aa4.27□□□□□ -1.73
PHF3-202ENST00000393387 AEBP1Q8IUX7 1158 aa4.27□□□□□ -1.73
PHF3-202ENST00000393387 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.27□□□□□ -1.73
PHF3-202ENST00000393387 MIER1Q8N108 512 aa4.27□□□□□ -1.73
PHF3-202ENST00000393387 HSP90AB1P08238 724 aaKnown RBP4.26□□□□□ -1.73
PHF3-202ENST00000393387 L1TD1Q5T7N2 865 aaKnown RBP4.26□□□□□ -1.73
PHF3-202ENST00000393387 RGS3P49796 1198 aa4.26□□□□□ -1.73
PHF3-202ENST00000393387 NAP1L2Q9ULW6 460 aaPredicted RBP4.25□□□□□ -1.73
PHF3-202ENST00000393387 FAM13BQ9NYF5 915 aa4.24□□□□□ -1.73
PHF3-202ENST00000393387 ADRA2BP18089 450 aa4.24□□□□□ -1.73
PHF3-202ENST00000393387 RSPH6AQ9H0K4 717 aa4.24□□□□□ -1.73
PHF3-202ENST00000393387 SUPT16HQ9Y5B9 1047 aaKnown RBP4.24□□□□□ -1.73
PHF3-202ENST00000393387 RBM19Q9Y4C8 960 aaKnown RBP4.24□□□□□ -1.73
PHF3-202ENST00000393387 HSP90AB3PQ58FF7 597 aa4.23□□□□□ -1.73
PHF3-202ENST00000393387 PLEKHG5O94827 1062 aa4.23□□□□□ -1.73
PHF3-202ENST00000393387 TNNT1P13805 278 aa4.23□□□□□ -1.73
PHF3-202ENST00000393387 B4GALNT3Q6L9W6 998 aa4.23□□□□□ -1.73
PHF3-202ENST00000393387 MYH16Q9H6N6 1097 aa4.23□□□□□ -1.73
PHF3-202ENST00000393387 STK11IPQ8N1F8 1099 aa4.22□□□□□ -1.73
PHF3-202ENST00000393387 WDR43Q15061 677 aaKnown RBP eCLIP4.22□□□□□ -1.73
PHF3-202ENST00000393387 KIAA2012Q0VF49 1180 aa4.22□□□□□ -1.73
PHF3-202ENST00000393387 A0A0G2JS52 829 aa4.22□□□□□ -1.73
PHF3-202ENST00000393387 SLKQ9H2G2 1235 aaPredicted RBP4.22□□□□□ -1.73
PHF3-202ENST00000393387 FOXD4L1Q9NU39 408 aa4.21□□□□□ -1.73
PHF3-202ENST00000393387 CCAR2Q8N163 923 aaKnown RBP4.21□□□□□ -1.74
PHF3-202ENST00000393387 GOLGA6L3A6NEY3 463 aa4.21□□□□□ -1.74
PHF3-202ENST00000393387 NRDCO43847 1150 aa4.21□□□□□ -1.74
PHF3-202ENST00000393387 MRS2Q9HD23 443 aa4.21□□□□□ -1.74
PHF3-202ENST00000393387 E9PSI1 815 aa4.2□□□□□ -1.74
PHF3-202ENST00000393387 ZNF592Q92610 1267 aa4.2□□□□□ -1.74
PHF3-202ENST00000393387 CHMP4AQ9BY43 222 aa4.2□□□□□ -1.74
PHF3-202ENST00000393387 IBSPP21815 317 aaPredicted RBP4.2□□□□□ -1.74
PHF3-202ENST00000393387 RBM10P98175 930 aaKnown RBP4.2□□□□□ -1.74
PHF3-202ENST00000393387 SKIDA1Q1XH10 827 aa4.2□□□□□ -1.74
PHF3-202ENST00000393387 PAXIP1Q6ZW49 1069 aaPredicted RBP4.2□□□□□ -1.74
PHF3-202ENST00000393387 CREBRFQ8IUR6 639 aa4.2□□□□□ -1.74
PHF3-202ENST00000393387 GOLGA6L4A6NEF3 574 aa4.2□□□□□ -1.74
PHF3-202ENST00000393387 TMC1Q8TDI8 760 aa4.19□□□□□ -1.74
PHF3-202ENST00000393387 MAP7D2Q96T17 732 aa4.19□□□□□ -1.74
PHF3-202ENST00000393387 FOXD4L5Q5VV16 416 aaPredicted RBP4.19□□□□□ -1.74
PHF3-202ENST00000393387 HSCBQ8IWL3 235 aa4.19□□□□□ -1.74
PHF3-202ENST00000393387 FOXD4L4Q8WXT5 416 aaPredicted RBP4.19□□□□□ -1.74
PHF3-202ENST00000393387 RRP12Q5JTH9 1297 aaKnown RBP4.19□□□□□ -1.74
PHF3-202ENST00000393387 GNL2Q13823 731 aaKnown RBP4.18□□□□□ -1.74
PHF3-202ENST00000393387 CASC1Q6TDU7 716 aa4.18□□□□□ -1.74
PHF3-202ENST00000393387 ARID3CA6NKF2 412 aa4.18□□□□□ -1.74
PHF3-202ENST00000393387 WWC1Q8IX03 1113 aa4.18□□□□□ -1.74
PHF3-202ENST00000393387 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.17□□□□□ -1.74
PHF3-202ENST00000393387 GPATCH11Q8N954 259 aa4.17□□□□□ -1.74
PHF3-202ENST00000393387 PRDM10Q9NQV6 1147 aa4.17□□□□□ -1.74
PHF3-202ENST00000393387 HSP90B1P14625 803 aaKnown RBP4.17□□□□□ -1.74
PHF3-202ENST00000393387 TSHZ2Q9NRE2 1034 aa4.17□□□□□ -1.74
PHF3-202ENST00000393387 SLC4A3P48751 1232 aa4.16□□□□□ -1.74
PHF3-202ENST00000393387 FGD1P98174 961 aa4.16□□□□□ -1.74
PHF3-202ENST00000393387 IL27Q8NEV9 243 aa4.16□□□□□ -1.74
PHF3-202ENST00000393387 NOL8Q76FK4 1167 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms