RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 GTPBP6O43824 516 aaPredicted RBP4.4□□□□□ -1.71
RNU6-220P-201ENST00000390919 BRPF1P55201 1214 aaPredicted RBP4.4□□□□□ -1.71
RNU6-220P-201ENST00000390919 GSE1Q14687 1217 aa4.4□□□□□ -1.71
RNU6-220P-201ENST00000390919 ZNF692Q9BU19 519 aaPredicted RBP4.4□□□□□ -1.71
RNU6-220P-201ENST00000390919 WDR70Q9NW82 654 aa4.4□□□□□ -1.71
RNU6-220P-201ENST00000390919 NPM2Q86SE8 214 aaKnown RBP4.39□□□□□ -1.71
RNU6-220P-201ENST00000390919 STK25O00506 426 aa4.38□□□□□ -1.71
RNU6-220P-201ENST00000390919 RIOK3O14730 519 aaKnown RBP4.37□□□□□ -1.71
RNU6-220P-201ENST00000390919 NKX1-1Q15270 411 aaPredicted RBP4.37□□□□□ -1.71
RNU6-220P-201ENST00000390919 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.37□□□□□ -1.71
RNU6-220P-201ENST00000390919 CAPN15O75808 1086 aa4.36□□□□□ -1.71
RNU6-220P-201ENST00000390919 VGFO15240 615 aaPredicted RBP4.35□□□□□ -1.71
RNU6-220P-201ENST00000390919 UBTFP17480 764 aaKnown RBP4.35□□□□□ -1.71
RNU6-220P-201ENST00000390919 PABPN1Q86U42 306 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU6-220P-201ENST00000390919 TRIM26Q12899 539 aaPredicted RBP4.34□□□□□ -1.71
RNU6-220P-201ENST00000390919 RNF25Q96BH1 459 aaPredicted RBP4.34□□□□□ -1.71
RNU6-220P-201ENST00000390919 SPDYE2BA6NHP3 402 aa4.33□□□□□ -1.72
RNU6-220P-201ENST00000390919 SPDYE6P0CI01 402 aa4.33□□□□□ -1.72
RNU6-220P-201ENST00000390919 SPDYE2Q495Y8 402 aa4.33□□□□□ -1.72
RNU6-220P-201ENST00000390919 RSPH6AQ9H0K4 717 aa4.33□□□□□ -1.72
RNU6-220P-201ENST00000390919 STK24Q9Y6E0 443 aa4.33□□□□□ -1.72
RNU6-220P-201ENST00000390919 DCAF8Q5TAQ9 597 aa4.32□□□□□ -1.72
RNU6-220P-201ENST00000390919 KCNV2Q8TDN2 545 aa4.32□□□□□ -1.72
RNU6-220P-201ENST00000390919 ZC3H15Q8WU90 426 aaKnown RBP4.32□□□□□ -1.72
RNU6-220P-201ENST00000390919 ZMYND15Q9H091 742 aa4.32□□□□□ -1.72
RNU6-220P-201ENST00000390919 SPINK5Q9NQ38 1064 aaPredicted RBP4.32□□□□□ -1.72
RNU6-220P-201ENST00000390919 SLC24A3Q9HC58 644 aa4.31□□□□□ -1.72
RNU6-220P-201ENST00000390919 ZBTB7CA1YPR0 619 aa4.3□□□□□ -1.72
RNU6-220P-201ENST00000390919 ARID3AQ99856 593 aa4.3□□□□□ -1.72
RNU6-220P-201ENST00000390919 BCL11BQ9C0K0 894 aaPredicted RBP4.3□□□□□ -1.72
RNU6-220P-201ENST00000390919 SSUH2Q9Y2M2 353 aa4.3□□□□□ -1.72
RNU6-220P-201ENST00000390919 FAM212AQ96EL1 285 aa4.29□□□□□ -1.72
RNU6-220P-201ENST00000390919 CCDC9Q9Y3X0 531 aaKnown RBP4.29□□□□□ -1.72
RNU6-220P-201ENST00000390919 ABCB7O75027 752 aa4.28□□□□□ -1.72
RNU6-220P-201ENST00000390919 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.27□□□□□ -1.73
RNU6-220P-201ENST00000390919 SMYD5Q6GMV2 418 aa4.27□□□□□ -1.73
RNU6-220P-201ENST00000390919 OSCARQ8IYS5 282 aa4.27□□□□□ -1.73
RNU6-220P-201ENST00000390919 ARHGEF1Q92888 912 aaKnown RBP4.27□□□□□ -1.73
RNU6-220P-201ENST00000390919 ZFP91Q96JP5 570 aaPredicted RBP4.27□□□□□ -1.73
RNU6-220P-201ENST00000390919 PDIA4P13667 645 aaKnown RBP4.26□□□□□ -1.73
RNU6-220P-201ENST00000390919 SGIP1Q9BQI5 828 aa4.26□□□□□ -1.73
RNU6-220P-201ENST00000390919 HRCP23327 699 aa4.25□□□□□ -1.73
RNU6-220P-201ENST00000390919 NUBP1P53384 320 aa4.24□□□□□ -1.73
RNU6-220P-201ENST00000390919 TESPA1A2RU30 521 aaPredicted RBP4.23□□□□□ -1.73
RNU6-220P-201ENST00000390919 E2F4Q16254 413 aa4.23□□□□□ -1.73
RNU6-220P-201ENST00000390919 SEMA3EO15041 775 aa4.22□□□□□ -1.73
RNU6-220P-201ENST00000390919 ZMYND10O75800 440 aa4.22□□□□□ -1.73
RNU6-220P-201ENST00000390919 CHRM1P11229 460 aaPredicted RBP4.22□□□□□ -1.73
RNU6-220P-201ENST00000390919 CADPS2Q86UW7 1296 aa4.22□□□□□ -1.73
RNU6-220P-201ENST00000390919 KRI1Q8N9T8 703 aaKnown RBP4.22□□□□□ -1.73
RNU6-220P-201ENST00000390919 IL27Q8NEV9 243 aa4.22□□□□□ -1.73
RNU6-220P-201ENST00000390919 AK7Q96M32 723 aa4.22□□□□□ -1.73
RNU6-220P-201ENST00000390919 APBB1O00213 710 aa4.2□□□□□ -1.74
RNU6-220P-201ENST00000390919 GPBP1L1Q9HC44 474 aaPredicted RBP4.2□□□□□ -1.74
RNU6-220P-201ENST00000390919 BARGINQ6ZT62 677 aa4.19□□□□□ -1.74
RNU6-220P-201ENST00000390919 ARID3CA6NKF2 412 aa4.18□□□□□ -1.74
RNU6-220P-201ENST00000390919 PYGBP11216 843 aa4.18□□□□□ -1.74
RNU6-220P-201ENST00000390919 FLIIQ13045 1269 aa4.18□□□□□ -1.74
RNU6-220P-201ENST00000390919 KDM4CQ9H3R0 1056 aa4.18□□□□□ -1.74
RNU6-220P-201ENST00000390919 C1QBPQ07021 282 aaKnown RBP4.17□□□□□ -1.74
RNU6-220P-201ENST00000390919 GPIHBP1Q8IV16 184 aa4.17□□□□□ -1.74
RNU6-220P-201ENST00000390919 C1orf115Q9H7X2 142 aa4.16□□□□□ -1.74
RNU6-220P-201ENST00000390919 PDE4DQ08499 809 aa4.15□□□□□ -1.75
RNU6-220P-201ENST00000390919 MKRN3Q13064 507 aaKnown RBP4.15□□□□□ -1.75
RNU6-220P-201ENST00000390919 ZNF467Q7Z7K2 595 aaPredicted RBP4.15□□□□□ -1.75
RNU6-220P-201ENST00000390919 RNF39Q9H2S5 420 aa4.15□□□□□ -1.75
RNU6-220P-201ENST00000390919 ZNF316A6NFI3 1004 aaPredicted RBP4.14□□□□□ -1.75
RNU6-220P-201ENST00000390919 KCTD17Q8N5Z5 321 aa4.14□□□□□ -1.75
RNU6-220P-201ENST00000390919 PDAP1Q13442 181 aaKnown RBP4.13□□□□□ -1.75
RNU6-220P-201ENST00000390919 RASEFQ8IZ41 740 aa4.13□□□□□ -1.75
RNU6-220P-201ENST00000390919 CCDC82Q8N4S0 544 aa4.13□□□□□ -1.75
RNU6-220P-201ENST00000390919 DDRGK1Q96HY6 314 aa4.13□□□□□ -1.75
RNU6-220P-201ENST00000390919 TRIM66O15016 1216 aa4.12□□□□□ -1.75
RNU6-220P-201ENST00000390919 RAD21O60216 631 aa4.11□□□□□ -1.75
RNU6-220P-201ENST00000390919 PRR29P0C7W0 189 aa4.11□□□□□ -1.75
RNU6-220P-201ENST00000390919 PDE4AP27815 886 aa4.11□□□□□ -1.75
RNU6-220P-201ENST00000390919 DSG3P32926 999 aa4.11□□□□□ -1.75
RNU6-220P-201ENST00000390919 SPDYE1Q8NFV5 336 aaPredicted RBP4.11□□□□□ -1.75
RNU6-220P-201ENST00000390919 LARP6Q9BRS8 491 aaKnown RBP4.11□□□□□ -1.75
RNU6-220P-201ENST00000390919 MFRPQ9BY79 579 aa4.11□□□□□ -1.75
RNU6-220P-201ENST00000390919 NLRP6P59044 892 aa4.1□□□□□ -1.75
RNU6-220P-201ENST00000390919 RBM26Q5T8P6 1007 aaKnown RBP4.1□□□□□ -1.75
RNU6-220P-201ENST00000390919 NECTIN2Q92692 538 aa4.1□□□□□ -1.75
RNU6-220P-201ENST00000390919 CCDC97Q96F63 343 aaPredicted RBP4.1□□□□□ -1.75
RNU6-220P-201ENST00000390919 FAM117AQ9C073 453 aa4.1□□□□□ -1.75
RNU6-220P-201ENST00000390919 A6NJR5 290 aa4.09□□□□□ -1.75
RNU6-220P-201ENST00000390919 TRAK2O60296 914 aa4.09□□□□□ -1.75
RNU6-220P-201ENST00000390919 TMCO4Q5TGY1 634 aa4.09□□□□□ -1.75
RNU6-220P-201ENST00000390919 AEBP1Q8IUX7 1158 aa4.09□□□□□ -1.75
RNU6-220P-201ENST00000390919 DDX27Q96GQ7 796 aaKnown RBP4.09□□□□□ -1.75
RNU6-220P-201ENST00000390919 CREBZFQ9NS37 354 aa4.09□□□□□ -1.75
RNU6-220P-201ENST00000390919 CLEC11AQ9Y240 323 aa4.09□□□□□ -1.75
RNU6-220P-201ENST00000390919 ARIH1Q9Y4X5 557 aaPredicted RBP4.09□□□□□ -1.75
RNU6-220P-201ENST00000390919 PSEN1P49768 467 aa4.08□□□□□ -1.76
RNU6-220P-201ENST00000390919 TRAIPQ9BWF2 469 aa4.08□□□□□ -1.76
RNU6-220P-201ENST00000390919 PPP1R37O75864 691 aa4.07□□□□□ -1.76
RNU6-220P-201ENST00000390919 MNX1P50219 401 aaPredicted RBP4.07□□□□□ -1.76
RNU6-220P-201ENST00000390919 CLUAP1Q96AJ1 413 aa4.07□□□□□ -1.76
RNU6-220P-201ENST00000390919 PCMTD1Q96MG8 357 aaPredicted RBP4.07□□□□□ -1.76
RNU6-220P-201ENST00000390919 SERPINA10Q9UK55 444 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms