RNA–Protein interactions for RNA: ENST00000377307.6

ARHGAP39-202, Transcript of Rho GTPase activating protein 39, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGAP39, Length 4,673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP39-202ENST00000377307 RBM19Q9Y4C8 960 aaKnown RBP21.97■■□□□ 1.11
ARHGAP39-202ENST00000377307 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
ARHGAP39-202ENST00000377307 EIF5BO60841 1220 aaKnown RBP21.95■■□□□ 1.1
ARHGAP39-202ENST00000377307 SIN3AQ96ST3 1273 aa21.95■■□□□ 1.1
ARHGAP39-202ENST00000377307 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
ARHGAP39-202ENST00000377307 ABCC8Q09428 1581 aa21.89■■□□□ 1.1
ARHGAP39-202ENST00000377307 ZNF777Q9ULD5 760 aaPredicted RBP21.88■■□□□ 1.09
ARHGAP39-202ENST00000377307 SALL2Q9Y467 1007 aaPredicted RBP21.86■■□□□ 1.09
ARHGAP39-202ENST00000377307 RRP7BPQ9NSQ0 103 aa21.81■■□□□ 1.08
ARHGAP39-202ENST00000377307 NOP58Q9Y2X3 529 aaKnown RBP21.8■■□□□ 1.08
ARHGAP39-202ENST00000377307 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
ARHGAP39-202ENST00000377307 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.79■■□□□ 1.08
ARHGAP39-202ENST00000377307 UPF2Q9HAU5 1272 aaKnown RBP21.78■■□□□ 1.08
ARHGAP39-202ENST00000377307 SETD5Q9C0A6 1442 aa21.77■■□□□ 1.08
ARHGAP39-202ENST00000377307 ERICH6BQ5W0A0 696 aa21.77■■□□□ 1.08
ARHGAP39-202ENST00000377307 DDRGK1Q96HY6 314 aa21.77■■□□□ 1.07
ARHGAP39-202ENST00000377307 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
ARHGAP39-202ENST00000377307 B4GALNT3Q6L9W6 998 aa21.72■■□□□ 1.07
ARHGAP39-202ENST00000377307 PPM1GO15355 546 aaPredicted RBP21.71■■□□□ 1.07
ARHGAP39-202ENST00000377307 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
ARHGAP39-202ENST00000377307 RAB3GAP2Q9H2M9 1393 aa21.69■■□□□ 1.06
ARHGAP39-202ENST00000377307 WIZO95785 1651 aa21.69■■□□□ 1.06
ARHGAP39-202ENST00000377307 FBLN2P98095 1184 aa21.69■■□□□ 1.06
ARHGAP39-202ENST00000377307 DHX57Q6P158 1386 aaKnown RBP21.69■■□□□ 1.06
ARHGAP39-202ENST00000377307 GLIPR1L2Q4G1C9 344 aa21.67■■□□□ 1.06
ARHGAP39-202ENST00000377307 DEKP35659 375 aaKnown RBP21.67■■□□□ 1.06
ARHGAP39-202ENST00000377307 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
ARHGAP39-202ENST00000377307 WDR43Q15061 677 aaKnown RBP eCLIP21.64■■□□□ 1.05
ARHGAP39-202ENST00000377307 KDM2AQ9Y2K7 1162 aa21.63■■□□□ 1.05
ARHGAP39-202ENST00000377307 ANP32BQ92688 251 aaKnown RBP21.61■■□□□ 1.05
ARHGAP39-202ENST00000377307 PPP1R15AO75807 674 aaPredicted RBP21.61■■□□□ 1.05
ARHGAP39-202ENST00000377307 TSPY4P0CV99 314 aa21.58■■□□□ 1.04
ARHGAP39-202ENST00000377307 TSPY10P0CW01 314 aa21.58■■□□□ 1.04
ARHGAP39-202ENST00000377307 NEFMP07197 916 aa21.58■■□□□ 1.04
ARHGAP39-202ENST00000377307 HSP90AA1P07900 732 aaKnown RBP21.55■■□□□ 1.04
ARHGAP39-202ENST00000377307 HSPA5P11021 654 aaKnown RBP21.53■■□□□ 1.04
ARHGAP39-202ENST00000377307 KCNH8Q96L42 1107 aa21.53■■□□□ 1.04
ARHGAP39-202ENST00000377307 LAS1LQ9Y4W2 734 aaKnown RBP21.53■■□□□ 1.04
ARHGAP39-202ENST00000377307 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
ARHGAP39-202ENST00000377307 BECN1Q14457 450 aa21.52■■□□□ 1.04
ARHGAP39-202ENST00000377307 RUSC2Q8N2Y8 1516 aa21.51■■□□□ 1.03
ARHGAP39-202ENST00000377307 SENP3-EIF4A1A0A087X0R7 540 aa21.5■■□□□ 1.03
ARHGAP39-202ENST00000377307 ARHGAP35Q9NRY4 1499 aa21.5■■□□□ 1.03
ARHGAP39-202ENST00000377307 RAPGEF2Q9Y4G8 1499 aa21.5■■□□□ 1.03
ARHGAP39-202ENST00000377307 CARD11Q9BXL7 1154 aa21.47■■□□□ 1.03
ARHGAP39-202ENST00000377307 CUX2O14529 1486 aa21.46■■□□□ 1.03
ARHGAP39-202ENST00000377307 ARXQ96QS3 562 aa21.44■■□□□ 1.02
ARHGAP39-202ENST00000377307 RTN4Q9NQC3 1192 aaKnown RBP21.44■■□□□ 1.02
ARHGAP39-202ENST00000377307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.42■■□□□ 1.02
ARHGAP39-202ENST00000377307 FANCIQ9NVI1 1328 aa21.4■■□□□ 1.02
ARHGAP39-202ENST00000377307 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
ARHGAP39-202ENST00000377307 IPO9Q96P70 1041 aaKnown RBP21.35■■□□□ 1.01
ARHGAP39-202ENST00000377307 TCERG1O14776 1098 aaKnown RBP21.33■■□□□ 1
ARHGAP39-202ENST00000377307 NUDCQ9Y266 331 aa21.31■■□□□ 1
ARHGAP39-202ENST00000377307 KNSTRNQ9Y448 316 aa21.3■■□□□ 1
ARHGAP39-202ENST00000377307 FMN1Q68DA7 1419 aa21.3■■□□□ 1
ARHGAP39-202ENST00000377307 RGL3Q3MIN7 710 aa21.29■■□□□ 1
ARHGAP39-202ENST00000377307 SMARCA2P51531 1590 aa21.29■■□□□ 1
ARHGAP39-202ENST00000377307 CDCA8Q53HL2 280 aa21.29■■□□□ 1
ARHGAP39-202ENST00000377307 RGS3P49796 1198 aa21.29■■□□□ 1
ARHGAP39-202ENST00000377307 SMARCA4P51532 1647 aa21.27■■□□□ 1
ARHGAP39-202ENST00000377307 TRIM44Q96DX7 344 aaPredicted RBP21.27■■□□□ 1
ARHGAP39-202ENST00000377307 PLEKHD1A6NEE1 506 aa21.26■□□□□ 0.99
ARHGAP39-202ENST00000377307 CHGAP10645 457 aaKnown RBP21.25■□□□□ 0.99
ARHGAP39-202ENST00000377307 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
ARHGAP39-202ENST00000377307 RCAN3Q9UKA8 241 aa21.23■□□□□ 0.99
ARHGAP39-202ENST00000377307 L3MBTL2Q969R5 705 aa21.21■□□□□ 0.99
ARHGAP39-202ENST00000377307 ZBED9Q6R2W3 1325 aa21.2■□□□□ 0.98
ARHGAP39-202ENST00000377307 KIF21BO75037 1637 aa21.18■□□□□ 0.98
ARHGAP39-202ENST00000377307 FOXD1Q16676 465 aa21.18■□□□□ 0.98
ARHGAP39-202ENST00000377307 RALBP1Q15311 655 aa21.18■□□□□ 0.98
ARHGAP39-202ENST00000377307 PRKRIP1Q9H875 184 aaPredicted RBP21.18■□□□□ 0.98
ARHGAP39-202ENST00000377307 CC2D1BQ5T0F9 858 aaKnown RBP21.17■□□□□ 0.98
ARHGAP39-202ENST00000377307 CHMP7Q8WUX9 453 aaPredicted RBP21.17■□□□□ 0.98
ARHGAP39-202ENST00000377307 GOLGA6L22H0YM25 854 aa21.17■□□□□ 0.98
ARHGAP39-202ENST00000377307 USP35Q9P2H5 1018 aa21.15■□□□□ 0.98
ARHGAP39-202ENST00000377307 DCAF11Q8TEB1 546 aa21.15■□□□□ 0.98
ARHGAP39-202ENST00000377307 KTN1Q86UP2 1357 aaKnown RBP21.13■□□□□ 0.97
ARHGAP39-202ENST00000377307 L1TD1Q5T7N2 865 aaKnown RBP21.12■□□□□ 0.97
ARHGAP39-202ENST00000377307 TMF1P82094 1093 aa21.12■□□□□ 0.97
ARHGAP39-202ENST00000377307 NAP1L5Q96NT1 182 aaPredicted RBP21.12■□□□□ 0.97
ARHGAP39-202ENST00000377307 PDE3BQ13370 1112 aa21.11■□□□□ 0.97
ARHGAP39-202ENST00000377307 MYH16Q9H6N6 1097 aa21.11■□□□□ 0.97
ARHGAP39-202ENST00000377307 FHOD3Q2V2M9 1422 aa21.1■□□□□ 0.97
ARHGAP39-202ENST00000377307 CFAP53Q96M91 514 aa21.1■□□□□ 0.97
ARHGAP39-202ENST00000377307 PKD2Q13563 968 aa21.1■□□□□ 0.97
ARHGAP39-202ENST00000377307 ROCK2O75116 1388 aaKnown RBP21.08■□□□□ 0.96
ARHGAP39-202ENST00000377307 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.96
ARHGAP39-202ENST00000377307 RRBP1Q9P2E9 1410 aaKnown RBP21.08■□□□□ 0.96
ARHGAP39-202ENST00000377307 SLC24A1O60721 1099 aa21.07■□□□□ 0.96
ARHGAP39-202ENST00000377307 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
ARHGAP39-202ENST00000377307 CCDC18Q5T9S5 1454 aa21.06■□□□□ 0.96
ARHGAP39-202ENST00000377307 FRAT1Q92837 279 aaPredicted RBP21.06■□□□□ 0.96
ARHGAP39-202ENST00000377307 NLRP13Q86W25 1043 aa21.04■□□□□ 0.96
ARHGAP39-202ENST00000377307 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.96
ARHGAP39-202ENST00000377307 NEUROD2Q15784 382 aa21.02■□□□□ 0.96
ARHGAP39-202ENST00000377307 MS4A1P11836 297 aa21.01■□□□□ 0.95
ARHGAP39-202ENST00000377307 PDE4AP27815 886 aa21.01■□□□□ 0.95
ARHGAP39-202ENST00000377307 KIF15Q9NS87 1388 aa20.96■□□□□ 0.95
ARHGAP39-202ENST00000377307 PHLDB1Q86UU1 1377 aa20.95■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 227.4 ms