RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 ZRSR1Q15695 479 aaKnown RBP12.91□□□□□ -0.34
SPEN-201ENST00000375759 CASC1Q6TDU7 716 aa12.89□□□□□ -0.35
SPEN-201ENST00000375759 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.353e-10■■■■■ 42.4
SPEN-201ENST00000375759 NAP1L5Q96NT1 182 aaPredicted RBP12.87□□□□□ -0.35
SPEN-201ENST00000375759 SCRIBQ14160 1630 aa12.82□□□□□ -0.36
SPEN-201ENST00000375759 NOP58Q9Y2X3 529 aaKnown RBP12.82□□□□□ -0.36
SPEN-201ENST00000375759 GOLGA6L6A8MZA4 724 aa12.81□□□□□ -0.36
SPEN-201ENST00000375759 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
SPEN-201ENST00000375759 MTUS2Q5JR59 1369 aa12.8□□□□□ -0.36
SPEN-201ENST00000375759 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.8□□□□□ -0.365e-7■■□□□ 14.1
SPEN-201ENST00000375759 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
SPEN-201ENST00000375759 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
SPEN-201ENST00000375759 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
SPEN-201ENST00000375759 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
SPEN-201ENST00000375759 NRDCO43847 1150 aa12.78□□□□□ -0.36
SPEN-201ENST00000375759 CHAF1AQ13111 956 aaPredicted RBP12.77□□□□□ -0.37
SPEN-201ENST00000375759 PPP4R2Q9NY27 417 aa12.77□□□□□ -0.37
SPEN-201ENST00000375759 SUPT16HQ9Y5B9 1047 aaKnown RBP12.77□□□□□ -0.37
SPEN-201ENST00000375759 CFAP53Q96M91 514 aa12.75□□□□□ -0.37
SPEN-201ENST00000375759 CDCA8Q53HL2 280 aa12.75□□□□□ -0.37
SPEN-201ENST00000375759 CLIP1P30622 1438 aa12.74□□□□□ -0.37
SPEN-201ENST00000375759 CHMP4BQ9H444 224 aaKnown RBP12.74□□□□□ -0.37
SPEN-201ENST00000375759 L1TD1Q5T7N2 865 aaKnown RBP12.73□□□□□ -0.37
SPEN-201ENST00000375759 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
SPEN-201ENST00000375759 LAS1LQ9Y4W2 734 aaKnown RBP12.73□□□□□ -0.37
SPEN-201ENST00000375759 HIRIP3Q9BW71 556 aaPredicted RBP12.73□□□□□ -0.37
SPEN-201ENST00000375759 NPM1P06748 294 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPEN-201ENST00000375759 KNSTRNQ9Y448 316 aa12.72□□□□□ -0.37
SPEN-201ENST00000375759 HSP90AB1P08238 724 aaKnown RBP12.71□□□□□ -0.37
SPEN-201ENST00000375759 MSNP26038 577 aaKnown RBP12.71□□□□□ -0.37
SPEN-201ENST00000375759 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
SPEN-201ENST00000375759 MS4A1P11836 297 aa12.69□□□□□ -0.38
SPEN-201ENST00000375759 PLCB2Q00722 1185 aa12.68□□□□□ -0.38
SPEN-201ENST00000375759 HSCBQ8IWL3 235 aa12.66□□□□□ -0.38
SPEN-201ENST00000375759 GOLGA3Q08378 1498 aa12.66□□□□□ -0.38
SPEN-201ENST00000375759 EEA1Q15075 1411 aa12.66□□□□□ -0.38
SPEN-201ENST00000375759 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
SPEN-201ENST00000375759 RGS3P49796 1198 aa12.65□□□□□ -0.38
SPEN-201ENST00000375759 DEKP35659 375 aaKnown RBP12.64□□□□□ -0.39
SPEN-201ENST00000375759 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
SPEN-201ENST00000375759 MAPK8IP3Q9UPT6 1336 aa12.63□□□□□ -0.39
SPEN-201ENST00000375759 PLPPR3Q6T4P5 718 aa12.63□□□□□ -0.39
SPEN-201ENST00000375759 PTMSP20962 102 aa12.63□□□□□ -0.39
SPEN-201ENST00000375759 RRP7BPQ9NSQ0 103 aa12.62□□□□□ -0.39
SPEN-201ENST00000375759 GOLGA6L4A6NEF3 574 aa12.62□□□□□ -0.39
SPEN-201ENST00000375759 CEP162Q5TB80 1403 aa12.61□□□□□ -0.39
SPEN-201ENST00000375759 FGD1P98174 961 aa12.61□□□□□ -0.39
SPEN-201ENST00000375759 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
SPEN-201ENST00000375759 NUDCQ9Y266 331 aa12.6□□□□□ -0.39
SPEN-201ENST00000375759 PNNQ9H307 717 aaKnown RBP12.6□□□□□ -0.39
SPEN-201ENST00000375759 A0A0G2JS52 829 aa12.6□□□□□ -0.39
SPEN-201ENST00000375759 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
SPEN-201ENST00000375759 PPP1R15AO75807 674 aaPredicted RBP12.59□□□□□ -0.39
SPEN-201ENST00000375759 MCCP23508 829 aa12.59□□□□□ -0.39
SPEN-201ENST00000375759 CARD11Q9BXL7 1154 aa12.58□□□□□ -0.4
SPEN-201ENST00000375759 KCNJ4P48050 445 aa12.58□□□□□ -0.4
SPEN-201ENST00000375759 B4GALNT3Q6L9W6 998 aa12.58□□□□□ -0.4
SPEN-201ENST00000375759 DRC7Q8IY82 874 aa12.58□□□□□ -0.4
SPEN-201ENST00000375759 FRAT1Q92837 279 aaPredicted RBP12.58□□□□□ -0.4
SPEN-201ENST00000375759 ZBTB7CA1YPR0 619 aa12.56□□□□□ -0.4
SPEN-201ENST00000375759 OS9Q13438 667 aaPredicted RBP12.55□□□□□ -0.4
SPEN-201ENST00000375759 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
SPEN-201ENST00000375759 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
SPEN-201ENST00000375759 RBM19Q9Y4C8 960 aaKnown RBP12.54□□□□□ -0.4
SPEN-201ENST00000375759 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
SPEN-201ENST00000375759 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
SPEN-201ENST00000375759 TULP1O00294 542 aaPredicted RBP12.53□□□□□ -0.4
SPEN-201ENST00000375759 MYO15BQ96JP2 1530 aa12.52□□□□□ -0.41
SPEN-201ENST00000375759 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
SPEN-201ENST00000375759 NAP1L2Q9ULW6 460 aaPredicted RBP12.51□□□□□ -0.41
SPEN-201ENST00000375759 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
SPEN-201ENST00000375759 SYAP1Q96A49 352 aaPredicted RBP12.5□□□□□ -0.41
SPEN-201ENST00000375759 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
SPEN-201ENST00000375759 SENP3-EIF4A1A0A087X0R7 540 aa12.5□□□□□ -0.41
SPEN-201ENST00000375759 PLEKHD1A6NEE1 506 aa12.49□□□□□ -0.41
SPEN-201ENST00000375759 HAP1P54257 671 aaPredicted RBP12.48□□□□□ -0.41
SPEN-201ENST00000375759 TNNT3P45378 269 aaPredicted RBP12.47□□□□□ -0.41
SPEN-201ENST00000375759 GOLGA2Q08379 1002 aa12.47□□□□□ -0.41
SPEN-201ENST00000375759 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
SPEN-201ENST00000375759 CC2D1BQ5T0F9 858 aaKnown RBP12.46□□□□□ -0.41
SPEN-201ENST00000375759 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.42
SPEN-201ENST00000375759 TIMELESSQ9UNS1 1208 aa12.46□□□□□ -0.42
SPEN-201ENST00000375759 CFDP1Q9UEE9 299 aaPredicted RBP12.45□□□□□ -0.42
SPEN-201ENST00000375759 TNIKQ9UKE5 1360 aa12.45□□□□□ -0.42
SPEN-201ENST00000375759 ARID4BQ4LE39 1312 aaPredicted RBP12.45□□□□□ -0.42
SPEN-201ENST00000375759 SPRYD3Q8NCJ5 442 aa12.45□□□□□ -0.42
SPEN-201ENST00000375759 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
SPEN-201ENST00000375759 TMF1P82094 1093 aa12.45□□□□□ -0.42
SPEN-201ENST00000375759 TCERG1O14776 1098 aaKnown RBP12.44□□□□□ -0.42
SPEN-201ENST00000375759 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
SPEN-201ENST00000375759 GNL2Q13823 731 aaKnown RBP12.44□□□□□ -0.42
SPEN-201ENST00000375759 KIAA1211Q6ZU35 1233 aa12.44□□□□□ -0.42
SPEN-201ENST00000375759 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
SPEN-201ENST00000375759 USP35Q9P2H5 1018 aa12.43□□□□□ -0.42
SPEN-201ENST00000375759 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
SPEN-201ENST00000375759 POGKQ9P215 609 aa12.43□□□□□ -0.42
SPEN-201ENST00000375759 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
SPEN-201ENST00000375759 NOC3LQ8WTT2 800 aaKnown RBP12.42□□□□□ -0.42
SPEN-201ENST00000375759 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
SPEN-201ENST00000375759 GOLGA6L3A6NEY3 463 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms