RNA–Protein interactions for RNA: ENST00000367694.2

RC3H1-202, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene RC3H1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-202ENST00000367694 A0A0U1RQG5 324 aaPredicted RBP6.96□□□□□ -1.3
RC3H1-202ENST00000367694 PAXIP1Q6ZW49 1069 aaPredicted RBP6.95□□□□□ -1.3
RC3H1-202ENST00000367694 CDK11BP21127 795 aaKnown RBP6.95□□□□□ -1.3
RC3H1-202ENST00000367694 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.95□□□□□ -1.3
RC3H1-202ENST00000367694 ARID3AQ99856 593 aa6.94□□□□□ -1.3
RC3H1-202ENST00000367694 NAP1L5Q96NT1 182 aaPredicted RBP6.94□□□□□ -1.3
RC3H1-202ENST00000367694 HAP1P54257 671 aaPredicted RBP6.94□□□□□ -1.3
RC3H1-202ENST00000367694 RBM19Q9Y4C8 960 aaKnown RBP6.94□□□□□ -1.3
RC3H1-202ENST00000367694 RNF216Q9NWF9 866 aaPredicted RBP6.93□□□□□ -1.3
RC3H1-202ENST00000367694 PRDM4Q9UKN5 801 aa6.93□□□□□ -1.3
RC3H1-202ENST00000367694 NAP1L2Q9ULW6 460 aaPredicted RBP6.93□□□□□ -1.3
RC3H1-202ENST00000367694 NACADO15069 1562 aa6.92□□□□□ -1.3
RC3H1-202ENST00000367694 UNC13AQ9UPW8 1703 aa6.92□□□□□ -1.3
RC3H1-202ENST00000367694 VGFO15240 615 aaPredicted RBP6.92□□□□□ -1.3
RC3H1-202ENST00000367694 CENPJQ9HC77 1338 aaPredicted RBP6.91□□□□□ -1.3
RC3H1-202ENST00000367694 RB1CC1Q8TDY2 1594 aa6.91□□□□□ -1.3
RC3H1-202ENST00000367694 IL27Q8NEV9 243 aa6.9□□□□□ -1.3
RC3H1-202ENST00000367694 WASHC2CQ9Y4E1 1318 aa6.9□□□□□ -1.3
RC3H1-202ENST00000367694 GTF2E1P29083 439 aaPredicted RBP6.9□□□□□ -1.31
RC3H1-202ENST00000367694 VSIG10Q8N0Z9 540 aa6.9□□□□□ -1.31
RC3H1-202ENST00000367694 DIEXFQ68CQ4 756 aaKnown RBP6.89□□□□□ -1.31
RC3H1-202ENST00000367694 HMGB1P09429 215 aaKnown RBP6.88□□□□□ -1.31
RC3H1-202ENST00000367694 PUS7Q96PZ0 661 aaKnown RBP6.88□□□□□ -1.31
RC3H1-202ENST00000367694 ADRA2BP18089 450 aa6.87□□□□□ -1.31
RC3H1-202ENST00000367694 ZFP91Q96JP5 570 aaPredicted RBP6.86□□□□□ -1.31
RC3H1-202ENST00000367694 WASHC2AQ641Q2 1341 aa6.86□□□□□ -1.31
RC3H1-202ENST00000367694 TICAM2Q86XR7 235 aa6.86□□□□□ -1.31
RC3H1-202ENST00000367694 RRP9O43818 475 aaKnown RBP6.85□□□□□ -1.31
RC3H1-202ENST00000367694 PLCB2Q00722 1185 aa6.85□□□□□ -1.31
RC3H1-202ENST00000367694 CALD1Q05682 793 aaKnown RBP6.85□□□□□ -1.31
RC3H1-202ENST00000367694 GRIPAP1Q4V328 841 aa6.85□□□□□ -1.31
RC3H1-202ENST00000367694 PPP6R1Q9UPN7 881 aa6.85□□□□□ -1.31
RC3H1-202ENST00000367694 IGSF3O75054 1194 aa6.84□□□□□ -1.31
RC3H1-202ENST00000367694 FTSJ3Q8IY81 847 aaKnown RBP6.84□□□□□ -1.31
RC3H1-202ENST00000367694 STAC3Q96MF2 364 aa6.84□□□□□ -1.31
RC3H1-202ENST00000367694 SECISBP2LQ93073 1101 aaKnown RBP6.82□□□□□ -1.32
RC3H1-202ENST00000367694 MMP14P50281 582 aa6.82□□□□□ -1.32
RC3H1-202ENST00000367694 ARID4BQ4LE39 1312 aaPredicted RBP6.81□□□□□ -1.32
RC3H1-202ENST00000367694 UBTFP17480 764 aaKnown RBP6.78□□□□□ -1.32
RC3H1-202ENST00000367694 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.78□□□□□ -1.32
RC3H1-202ENST00000367694 BBXQ8WY36 941 aaPredicted RBP6.78□□□□□ -1.32
RC3H1-202ENST00000367694 CHMP4BQ9H444 224 aaKnown RBP6.78□□□□□ -1.32
RC3H1-202ENST00000367694 BICRAQ9NZM4 1560 aa6.77□□□□□ -1.33
RC3H1-202ENST00000367694 KCNG1Q9UIX4 513 aa6.77□□□□□ -1.33
RC3H1-202ENST00000367694 NCLP19338 710 aaKnown RBP6.76□□□□□ -1.33
RC3H1-202ENST00000367694 FAM43AQ8N2R8 423 aa6.76□□□□□ -1.33
RC3H1-202ENST00000367694 CLSTN1O94985 981 aa6.76□□□□□ -1.33
RC3H1-202ENST00000367694 CCDC9Q9Y3X0 531 aaKnown RBP6.75□□□□□ -1.33
RC3H1-202ENST00000367694 NPM1P06748 294 aaKnown RBP eCLIP6.74□□□□□ -1.33
RC3H1-202ENST00000367694 MCCP23508 829 aa6.72□□□□□ -1.33
RC3H1-202ENST00000367694 ILDR1Q86SU0 546 aaPredicted RBP6.72□□□□□ -1.33
RC3H1-202ENST00000367694 CNPY4Q8N129 248 aa6.72□□□□□ -1.33
RC3H1-202ENST00000367694 BRPF3Q9ULD4 1205 aa6.72□□□□□ -1.33
RC3H1-202ENST00000367694 RGS22Q8NE09 1264 aa6.71□□□□□ -1.33
RC3H1-202ENST00000367694 CECR2Q9BXF3 1484 aa6.71□□□□□ -1.33
RC3H1-202ENST00000367694 IRX6P78412 446 aaPredicted RBP6.71□□□□□ -1.34
RC3H1-202ENST00000367694 CANXP27824 592 aaKnown RBP6.7□□□□□ -1.34
RC3H1-202ENST00000367694 CC2D2BQ6DHV5 1058 aa6.7□□□□□ -1.34
RC3H1-202ENST00000367694 FOXD1Q16676 465 aa6.7□□□□□ -1.34
RC3H1-202ENST00000367694 USP35Q9P2H5 1018 aa6.7□□□□□ -1.34
RC3H1-202ENST00000367694 ERCC6Q03468 1493 aa6.7□□□□□ -1.34
RC3H1-202ENST00000367694 TMEM51Q9NW97 253 aa6.69□□□□□ -1.34
RC3H1-202ENST00000367694 PPM1GO15355 546 aaPredicted RBP6.69□□□□□ -1.34
RC3H1-202ENST00000367694 ZCCHC6Q5VYS8 1495 aaKnown RBP6.68□□□□□ -1.34
RC3H1-202ENST00000367694 HSP90AA2PQ14568 343 aaPredicted RBP6.68□□□□□ -1.34
RC3H1-202ENST00000367694 SETQ01105 290 aaPredicted RBP6.67□□□□□ -1.34
RC3H1-202ENST00000367694 TMED8Q6PL24 325 aaPredicted RBP6.67□□□□□ -1.34
RC3H1-202ENST00000367694 PSEN1P49768 467 aa6.67□□□□□ -1.34
RC3H1-202ENST00000367694 ZNF830Q96NB3 372 aaPredicted RBP6.67□□□□□ -1.34
RC3H1-202ENST00000367694 CNGB1Q14028 1251 aaPredicted RBP6.66□□□□□ -1.34
RC3H1-202ENST00000367694 ZNF592Q92610 1267 aa6.65□□□□□ -1.34
RC3H1-202ENST00000367694 ZNF316A6NFI3 1004 aaPredicted RBP6.65□□□□□ -1.35
RC3H1-202ENST00000367694 NEFMP07197 916 aa6.65□□□□□ -1.35
RC3H1-202ENST00000367694 UTP14CQ5TAP6 766 aaKnown RBP6.65□□□□□ -1.35
RC3H1-202ENST00000367694 CLGNO14967 610 aa6.64□□□□□ -1.35
RC3H1-202ENST00000367694 PHF14O94880 888 aa6.63□□□□□ -1.35
RC3H1-202ENST00000367694 MIER1Q8N108 512 aa6.63□□□□□ -1.35
RC3H1-202ENST00000367694 MAFGO15525 162 aa6.63□□□□□ -1.35
RC3H1-202ENST00000367694 SLC20A2Q08357 652 aa6.63□□□□□ -1.35
RC3H1-202ENST00000367694 ZNF622Q969S3 477 aaKnown RBP eCLIP6.63□□□□□ -1.352e-6■■□□□ 11.6
RC3H1-202ENST00000367694 CYB5RLQ6IPT4 315 aa6.62□□□□□ -1.35
RC3H1-202ENST00000367694 YTHDC1Q96MU7 727 aaKnown RBP6.62□□□□□ -1.35
RC3H1-202ENST00000367694 PDCL3Q9H2J4 239 aa6.62□□□□□ -1.35
RC3H1-202ENST00000367694 NOP58Q9Y2X3 529 aaKnown RBP6.62□□□□□ -1.35
RC3H1-202ENST00000367694 PTMAP06454 111 aaKnown RBP6.62□□□□□ -1.35
RC3H1-202ENST00000367694 PLCD4Q9BRC7 762 aa6.62□□□□□ -1.35
RC3H1-202ENST00000367694 FAM43BQ6ZT52 329 aaPredicted RBP6.62□□□□□ -1.35
RC3H1-202ENST00000367694 SMAP1Q8IYB5 467 aaPredicted RBP6.62□□□□□ -1.35
RC3H1-202ENST00000367694 AXDND1Q5T1B0 1012 aaPredicted RBP6.61□□□□□ -1.35
RC3H1-202ENST00000367694 PRDM16Q9HAZ2 1276 aa6.61□□□□□ -1.35
RC3H1-202ENST00000367694 SLC52A1Q9NWF4 448 aa6.61□□□□□ -1.35
RC3H1-202ENST00000367694 WWC1Q8IX03 1113 aa6.61□□□□□ -1.35
RC3H1-202ENST00000367694 RGS3P49796 1198 aa6.6□□□□□ -1.35
RC3H1-202ENST00000367694 PRDM10Q9NQV6 1147 aa6.6□□□□□ -1.35
RC3H1-202ENST00000367694 CCER1Q8TC90 406 aaPredicted RBP6.6□□□□□ -1.35
RC3H1-202ENST00000367694 CEP120Q8N960 986 aa6.59□□□□□ -1.35
RC3H1-202ENST00000367694 OSCARQ8IYS5 282 aa6.59□□□□□ -1.36
RC3H1-202ENST00000367694 PSMD1Q99460 953 aa6.58□□□□□ -1.36
RC3H1-202ENST00000367694 DNAJC2Q99543 621 aaKnown RBP6.58□□□□□ -1.36
RC3H1-202ENST00000367694 ZNF692Q9BU19 519 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms