RNA–Protein interactions for RNA: ENST00000359540.7

BCR-202, Transcript of BCR, RhoGEF and GTPase activating protein, humanhuman

TSL 1 (best) BASIC

Gene BCR, Length 4,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCR-202ENST00000359540 KDM2AQ9Y2K7 1162 aa26.87■■□□□ 1.89
BCR-202ENST00000359540 NPM1P06748 294 aaKnown RBP eCLIP26.81■■□□□ 1.88
BCR-202ENST00000359540 CANXP27824 592 aaKnown RBP26.81■■□□□ 1.88
BCR-202ENST00000359540 CCDC136Q96JN2 1154 aa26.8■■□□□ 1.88
BCR-202ENST00000359540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.8■■□□□ 1.884e-6■■■□□ 14.6
BCR-202ENST00000359540 SUPT16HQ9Y5B9 1047 aaKnown RBP26.78■■□□□ 1.88
BCR-202ENST00000359540 SENP3-EIF4A1A0A087X0R7 540 aa26.77■■□□□ 1.88
BCR-202ENST00000359540 TSPY4P0CV99 314 aa26.75■■□□□ 1.87
BCR-202ENST00000359540 TSPY10P0CW01 314 aa26.75■■□□□ 1.87
BCR-202ENST00000359540 CARMIL1Q5VZK9 1371 aa26.7■■□□□ 1.86
BCR-202ENST00000359540 RUSC2Q8N2Y8 1516 aa26.69■■□□□ 1.86
BCR-202ENST00000359540 CUX2O14529 1486 aa26.67■■□□□ 1.86
BCR-202ENST00000359540 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
BCR-202ENST00000359540 BCL11AQ9H165 835 aa26.67■■□□□ 1.86
BCR-202ENST00000359540 TOP2AP11388 1531 aaKnown RBP26.65■■□□□ 1.86
BCR-202ENST00000359540 CHGAP10645 457 aaKnown RBP26.61■■□□□ 1.85
BCR-202ENST00000359540 NBR1Q14596 966 aa26.61■■□□□ 1.85
BCR-202ENST00000359540 FHAD1B1AJZ9 1412 aa26.56■■□□□ 1.84
BCR-202ENST00000359540 SETD5Q9C0A6 1442 aa26.55■■□□□ 1.84
BCR-202ENST00000359540 RAPGEF2Q9Y4G8 1499 aa26.53■■□□□ 1.84
BCR-202ENST00000359540 CFDP1Q9UEE9 299 aaPredicted RBP26.53■■□□□ 1.84
BCR-202ENST00000359540 RAB3GAP2Q9H2M9 1393 aa26.53■■□□□ 1.84
BCR-202ENST00000359540 RGL3Q3MIN7 710 aa26.53■■□□□ 1.84
BCR-202ENST00000359540 ZBTB47Q9UFB7 747 aaPredicted RBP26.52■■□□□ 1.84
BCR-202ENST00000359540 ESF1Q9H501 851 aaKnown RBP26.49■■□□□ 1.83
BCR-202ENST00000359540 PLEKHD1A6NEE1 506 aa26.48■■□□□ 1.83
BCR-202ENST00000359540 TIMELESSQ9UNS1 1208 aa26.48■■□□□ 1.83
BCR-202ENST00000359540 ANP32EQ9BTT0 268 aa26.47■■□□□ 1.83
BCR-202ENST00000359540 WDR43Q15061 677 aaKnown RBP eCLIP26.44■■□□□ 1.821e-6■□□□□ 9.3
BCR-202ENST00000359540 SMARCA4P51532 1647 aa26.44■■□□□ 1.82
BCR-202ENST00000359540 ERCC6Q03468 1493 aa26.43■■□□□ 1.82
BCR-202ENST00000359540 NEFMP07197 916 aa26.42■■□□□ 1.82
BCR-202ENST00000359540 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
BCR-202ENST00000359540 CARD11Q9BXL7 1154 aa26.41■■□□□ 1.82
BCR-202ENST00000359540 KCNH8Q96L42 1107 aa26.39■■□□□ 1.82
BCR-202ENST00000359540 CCER2I3L3R5 266 aa26.37■■□□□ 1.81
BCR-202ENST00000359540 ATAD2BQ9ULI0 1458 aa26.37■■□□□ 1.81
BCR-202ENST00000359540 FOXD1Q16676 465 aa26.36■■□□□ 1.81
BCR-202ENST00000359540 DHX57Q6P158 1386 aaKnown RBP26.36■■□□□ 1.81
BCR-202ENST00000359540 HSPA5P11021 654 aaKnown RBP26.35■■□□□ 1.81
BCR-202ENST00000359540 PPP1R15AO75807 674 aaPredicted RBP26.34■■□□□ 1.81
BCR-202ENST00000359540 B4GALNT3Q6L9W6 998 aa26.34■■□□□ 1.81
BCR-202ENST00000359540 PPP4R2Q9NY27 417 aa26.33■■□□□ 1.81
BCR-202ENST00000359540 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
BCR-202ENST00000359540 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.31■■□□□ 1.8
BCR-202ENST00000359540 SLC24A1O60721 1099 aa26.29■■□□□ 1.8
BCR-202ENST00000359540 TDRD9Q8NDG6 1382 aaKnown RBP26.25■■□□□ 1.79
BCR-202ENST00000359540 EIF4G1Q04637 1599 aaKnown RBP26.23■■□□□ 1.79
BCR-202ENST00000359540 RBM19Q9Y4C8 960 aaKnown RBP26.22■■□□□ 1.79
BCR-202ENST00000359540 SENP3Q9H4L4 574 aaPredicted RBP26.21■■□□□ 1.79
BCR-202ENST00000359540 UPF2Q9HAU5 1272 aaKnown RBP26.2■■□□□ 1.79
BCR-202ENST00000359540 PLPPR3Q6T4P5 718 aa26.2■■□□□ 1.78
BCR-202ENST00000359540 FHOD3Q2V2M9 1422 aa26.19■■□□□ 1.78
BCR-202ENST00000359540 TSHZ2Q9NRE2 1034 aa26.19■■□□□ 1.78
BCR-202ENST00000359540 STAG3Q9UJ98 1225 aa26.19■■□□□ 1.78
BCR-202ENST00000359540 DCAF11Q8TEB1 546 aa26.16■■□□□ 1.78
BCR-202ENST00000359540 MPHOSPH9Q99550 1183 aa26.16■■□□□ 1.78
BCR-202ENST00000359540 KNSTRNQ9Y448 316 aa26.13■■□□□ 1.77
BCR-202ENST00000359540 CC2D1BQ5T0F9 858 aaKnown RBP26.11■■□□□ 1.77
BCR-202ENST00000359540 FMN1Q68DA7 1419 aa26.1■■□□□ 1.77
BCR-202ENST00000359540 PKD2Q13563 968 aa26.09■■□□□ 1.77
BCR-202ENST00000359540 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
BCR-202ENST00000359540 L3MBTL2Q969R5 705 aa26.09■■□□□ 1.77
BCR-202ENST00000359540 HSP90AA1P07900 732 aaKnown RBP26.09■■□□□ 1.77
BCR-202ENST00000359540 EIF5BO60841 1220 aaKnown RBP26.07■■□□□ 1.76
BCR-202ENST00000359540 ARXQ96QS3 562 aa26.05■■□□□ 1.76
BCR-202ENST00000359540 NEUROD2Q15784 382 aa25.99■■□□□ 1.75
BCR-202ENST00000359540 NOP58Q9Y2X3 529 aaKnown RBP25.97■■□□□ 1.75
BCR-202ENST00000359540 CDCA8Q53HL2 280 aa25.97■■□□□ 1.75
BCR-202ENST00000359540 LAS1LQ9Y4W2 734 aaKnown RBP25.95■■□□□ 1.75
BCR-202ENST00000359540 RGS3P49796 1198 aa25.93■■□□□ 1.74
BCR-202ENST00000359540 DDRGK1Q96HY6 314 aa25.92■■□□□ 1.74
BCR-202ENST00000359540 KIF21BO75037 1637 aa25.92■■□□□ 1.74
BCR-202ENST00000359540 IGF1RP08069 1367 aa25.92■■□□□ 1.74
BCR-202ENST00000359540 TNNT2P45379 298 aaPredicted RBP25.89■■□□□ 1.74
BCR-202ENST00000359540 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
BCR-202ENST00000359540 TMF1P82094 1093 aa25.88■■□□□ 1.73
BCR-202ENST00000359540 NUP155O75694 1391 aa25.86■■□□□ 1.73
BCR-202ENST00000359540 ERICH6BQ5W0A0 696 aa25.83■■□□□ 1.72
BCR-202ENST00000359540 FRAT1Q92837 279 aaPredicted RBP25.82■■□□□ 1.72
BCR-202ENST00000359540 CFAP53Q96M91 514 aa25.8■■□□□ 1.72
BCR-202ENST00000359540 PHLDB1Q86UU1 1377 aa25.8■■□□□ 1.72
BCR-202ENST00000359540 ANP32BQ92688 251 aaKnown RBP25.78■■□□□ 1.72
BCR-202ENST00000359540 PPM1GO15355 546 aaPredicted RBP25.77■■□□□ 1.72
BCR-202ENST00000359540 BECN1Q14457 450 aa25.77■■□□□ 1.72
BCR-202ENST00000359540 TRHP20396 242 aaPredicted RBP25.77■■□□□ 1.72
BCR-202ENST00000359540 ARAP1Q96P48 1450 aa25.75■■□□□ 1.71
BCR-202ENST00000359540 PRKRIP1Q9H875 184 aaPredicted RBP25.75■■□□□ 1.71
BCR-202ENST00000359540 RCAN3Q9UKA8 241 aa25.75■■□□□ 1.71
BCR-202ENST00000359540 FANCD2Q9BXW9 1451 aa25.74■■□□□ 1.71
BCR-202ENST00000359540 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
BCR-202ENST00000359540 CCDC18Q5T9S5 1454 aa25.73■■□□□ 1.71
BCR-202ENST00000359540 ANKRD30AQ9BXX3 1397 aa25.73■■□□□ 1.71
BCR-202ENST00000359540 NUDCQ9Y266 331 aa25.73■■□□□ 1.71
BCR-202ENST00000359540 KTN1Q86UP2 1357 aaKnown RBP25.72■■□□□ 1.71
BCR-202ENST00000359540 ROCK2O75116 1388 aaKnown RBP25.72■■□□□ 1.71
BCR-202ENST00000359540 HNRNPMP52272 730 aaKnown RBP eCLIP25.72■■□□□ 1.711e-6■■■■□ 21.7
BCR-202ENST00000359540 ARID4BQ4LE39 1312 aaPredicted RBP25.7■■□□□ 1.7
BCR-202ENST00000359540 FTSJ3Q8IY81 847 aaKnown RBP25.7■■□□□ 1.7
BCR-202ENST00000359540 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms