RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 GOLGA2Q08379 1002 aa19.26■□□□□ 0.67
PDPK1-202ENST00000342085 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
PDPK1-202ENST00000342085 ISY1Q9ULR0 285 aaKnown RBP19.24■□□□□ 0.67
PDPK1-202ENST00000342085 ZRSR1Q15695 479 aaKnown RBP19.24■□□□□ 0.67
PDPK1-202ENST00000342085 NCLP19338 710 aaKnown RBP19.19■□□□□ 0.66
PDPK1-202ENST00000342085 HNRNPUQ00839 825 aaKnown RBP eCLIP19.16■□□□□ 0.66
PDPK1-202ENST00000342085 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
PDPK1-202ENST00000342085 PRM3Q9NNZ6 103 aa19.13■□□□□ 0.65
PDPK1-202ENST00000342085 LAS1LQ9Y4W2 734 aaKnown RBP19.12■□□□□ 0.65
PDPK1-202ENST00000342085 NAP1L2Q9ULW6 460 aaPredicted RBP19.09■□□□□ 0.65
PDPK1-202ENST00000342085 CCDC9Q9Y3X0 531 aaKnown RBP19.06■□□□□ 0.64
PDPK1-202ENST00000342085 MLECQ14165 292 aa19.05■□□□□ 0.64
PDPK1-202ENST00000342085 CCDC136Q96JN2 1154 aa19.05■□□□□ 0.64
PDPK1-202ENST00000342085 OS9Q13438 667 aaPredicted RBP19.05■□□□□ 0.64
PDPK1-202ENST00000342085 FKBP8Q14318 412 aa19.03■□□□□ 0.64
PDPK1-202ENST00000342085 TMX4Q9H1E5 349 aaPredicted RBP19.02■□□□□ 0.64
PDPK1-202ENST00000342085 FGD1P98174 961 aa19.02■□□□□ 0.64
PDPK1-202ENST00000342085 POGKQ9P215 609 aa19.02■□□□□ 0.64
PDPK1-202ENST00000342085 RGL3Q3MIN7 710 aa19.02■□□□□ 0.64
PDPK1-202ENST00000342085 KRI1Q8N9T8 703 aaKnown RBP19.01■□□□□ 0.63
PDPK1-202ENST00000342085 CASC1Q6TDU7 716 aa19■□□□□ 0.63
PDPK1-202ENST00000342085 SOX12O15370 315 aa19■□□□□ 0.63
PDPK1-202ENST00000342085 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
PDPK1-202ENST00000342085 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
PDPK1-202ENST00000342085 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
PDPK1-202ENST00000342085 NBR1Q14596 966 aa18.97■□□□□ 0.63
PDPK1-202ENST00000342085 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
PDPK1-202ENST00000342085 EIF4G2P78344 907 aaKnown RBP eCLIP18.95■□□□□ 0.62
PDPK1-202ENST00000342085 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.95■□□□□ 0.62
PDPK1-202ENST00000342085 PTMAP06454 111 aaKnown RBP18.92■□□□□ 0.62
PDPK1-202ENST00000342085 KCNJ4P48050 445 aa18.92■□□□□ 0.62
PDPK1-202ENST00000342085 ZNF330Q9Y3S2 320 aaPredicted RBP18.92■□□□□ 0.62
PDPK1-202ENST00000342085 MRS2Q9HD23 443 aa18.92■□□□□ 0.62
PDPK1-202ENST00000342085 FTSJ3Q8IY81 847 aaKnown RBP18.91■□□□□ 0.62
PDPK1-202ENST00000342085 TRIM44Q96DX7 344 aaPredicted RBP18.91■□□□□ 0.62
PDPK1-202ENST00000342085 GLIPR1L2Q4G1C9 344 aa18.9■□□□□ 0.62
PDPK1-202ENST00000342085 NEUROD2Q15784 382 aa18.9■□□□□ 0.62
PDPK1-202ENST00000342085 GOLGA6L22H0YM25 854 aa18.89■□□□□ 0.62
PDPK1-202ENST00000342085 MAPK8IP3Q9UPT6 1336 aa18.89■□□□□ 0.61
PDPK1-202ENST00000342085 PLEKHD1A6NEE1 506 aa18.89■□□□□ 0.61
PDPK1-202ENST00000342085 G3V3G9 751 aa18.89■□□□□ 0.61
PDPK1-202ENST00000342085 DCAF8Q5TAQ9 597 aa18.89■□□□□ 0.61
PDPK1-202ENST00000342085 MTUS2Q5JR59 1369 aa18.87■□□□□ 0.61
PDPK1-202ENST00000342085 TNNT2P45379 298 aaPredicted RBP18.87■□□□□ 0.61
PDPK1-202ENST00000342085 PLCB2Q00722 1185 aa18.86■□□□□ 0.61
PDPK1-202ENST00000342085 SENP3-EIF4A1A0A087X0R7 540 aa18.85■□□□□ 0.61
PDPK1-202ENST00000342085 DNTTIP2Q5QJE6 756 aaKnown RBP18.85■□□□□ 0.61
PDPK1-202ENST00000342085 RRP7BPQ9NSQ0 103 aa18.84■□□□□ 0.61
PDPK1-202ENST00000342085 CSB-PGBD3P0DP91 1061 aa18.84■□□□□ 0.61
PDPK1-202ENST00000342085 AMER1Q5JTC6 1135 aaPredicted RBP18.83■□□□□ 0.61
PDPK1-202ENST00000342085 BECN1Q14457 450 aa18.83■□□□□ 0.6
PDPK1-202ENST00000342085 PAK3O75914 559 aaPredicted RBP18.8■□□□□ 0.6
PDPK1-202ENST00000342085 IRX6P78412 446 aaPredicted RBP18.8■□□□□ 0.6
PDPK1-202ENST00000342085 KNSTRNQ9Y448 316 aa18.8■□□□□ 0.6
PDPK1-202ENST00000342085 NUDCQ9Y266 331 aa18.79■□□□□ 0.6
PDPK1-202ENST00000342085 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
PDPK1-202ENST00000342085 HIRIP3Q9BW71 556 aaPredicted RBP18.78■□□□□ 0.6
PDPK1-202ENST00000342085 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
PDPK1-202ENST00000342085 HDGFP51858 240 aaKnown RBP18.76■□□□□ 0.59
PDPK1-202ENST00000342085 GOLGA6L6A8MZA4 724 aa18.76■□□□□ 0.59
PDPK1-202ENST00000342085 PDE4CQ08493 712 aa18.74■□□□□ 0.59
PDPK1-202ENST00000342085 GNL2Q13823 731 aaKnown RBP18.73■□□□□ 0.59
PDPK1-202ENST00000342085 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
PDPK1-202ENST00000342085 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
PDPK1-202ENST00000342085 MSH5O43196 834 aa18.71■□□□□ 0.59
PDPK1-202ENST00000342085 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
PDPK1-202ENST00000342085 SAFB2Q14151 953 aaKnown RBP eCLIP18.69■□□□□ 0.58
PDPK1-202ENST00000342085 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
PDPK1-202ENST00000342085 GOLGA6L4A6NEF3 574 aa18.67■□□□□ 0.58
PDPK1-202ENST00000342085 ANO8Q9HCE9 1232 aaPredicted RBP18.67■□□□□ 0.58
PDPK1-202ENST00000342085 KLHL34Q8N239 644 aa18.67■□□□□ 0.58
PDPK1-202ENST00000342085 SRPK2P78362 688 aaKnown RBP18.66■□□□□ 0.58
PDPK1-202ENST00000342085 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
PDPK1-202ENST00000342085 RTF1Q92541 710 aaKnown RBP18.65■□□□□ 0.58
PDPK1-202ENST00000342085 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
PDPK1-202ENST00000342085 KIAA2012Q0VF49 1180 aa18.64■□□□□ 0.57
PDPK1-202ENST00000342085 NRDCO43847 1150 aa18.63■□□□□ 0.57
PDPK1-202ENST00000342085 CFDP1Q9UEE9 299 aaPredicted RBP18.63■□□□□ 0.57
PDPK1-202ENST00000342085 MEX3CQ5U5Q3 659 aaKnown RBP18.62■□□□□ 0.57
PDPK1-202ENST00000342085 ANP32EQ9BTT0 268 aa18.62■□□□□ 0.57
PDPK1-202ENST00000342085 VPS53Q5VIR6 699 aa18.61■□□□□ 0.57
PDPK1-202ENST00000342085 DDRGK1Q96HY6 314 aa18.61■□□□□ 0.57
PDPK1-202ENST00000342085 CNKSR2Q8WXI2 1034 aa18.61■□□□□ 0.57
PDPK1-202ENST00000342085 NOC3LQ8WTT2 800 aaKnown RBP18.6■□□□□ 0.57
PDPK1-202ENST00000342085 CHMP3Q9Y3E7 222 aa18.6■□□□□ 0.57
PDPK1-202ENST00000342085 GTF2E1P29083 439 aaPredicted RBP18.59■□□□□ 0.57
PDPK1-202ENST00000342085 TAF7LQ5H9L4 462 aa18.59■□□□□ 0.57
PDPK1-202ENST00000342085 STK26Q9P289 416 aa18.59■□□□□ 0.57
PDPK1-202ENST00000342085 HSP90AB1P08238 724 aaKnown RBP18.58■□□□□ 0.57
PDPK1-202ENST00000342085 CARD11Q9BXL7 1154 aa18.58■□□□□ 0.57
PDPK1-202ENST00000342085 GORABQ5T7V8 394 aa18.57■□□□□ 0.56
PDPK1-202ENST00000342085 CHAF1AQ13111 956 aaPredicted RBP18.56■□□□□ 0.56
PDPK1-202ENST00000342085 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
PDPK1-202ENST00000342085 FRAT2O75474 233 aaPredicted RBP18.55■□□□□ 0.56
PDPK1-202ENST00000342085 CC2D1BQ5T0F9 858 aaKnown RBP18.54■□□□□ 0.56
PDPK1-202ENST00000342085 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
PDPK1-202ENST00000342085 FBXO3Q9UK99 471 aa18.54■□□□□ 0.56
PDPK1-202ENST00000342085 L1TD1Q5T7N2 865 aaKnown RBP18.53■□□□□ 0.56
PDPK1-202ENST00000342085 WWC1Q8IX03 1113 aa18.53■□□□□ 0.56
PDPK1-202ENST00000342085 GGT6Q6P531 493 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms