RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CDK11BP21127 795 aaKnown RBP18.02■□□□□ 0.48
CLCN6-201ENST00000312413 PTMAP06454 111 aaKnown RBP18■□□□□ 0.47
CLCN6-201ENST00000312413 KDM2AQ9Y2K7 1162 aa18■□□□□ 0.47
CLCN6-201ENST00000312413 NAP1L5Q96NT1 182 aaPredicted RBP17.97■□□□□ 0.47
CLCN6-201ENST00000312413 DNTTIP2Q5QJE6 756 aaKnown RBP17.96■□□□□ 0.47
CLCN6-201ENST00000312413 SUPT16HQ9Y5B9 1047 aaKnown RBP17.96■□□□□ 0.47
CLCN6-201ENST00000312413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.466e-7■□□□□ 10.9
CLCN6-201ENST00000312413 RTN4Q9NQC3 1192 aaKnown RBP17.95■□□□□ 0.46
CLCN6-201ENST00000312413 NOP58Q9Y2X3 529 aaKnown RBP17.92■□□□□ 0.46
CLCN6-201ENST00000312413 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
CLCN6-201ENST00000312413 PPP4R2Q9NY27 417 aa17.9■□□□□ 0.46
CLCN6-201ENST00000312413 TSPY4P0CV99 314 aa17.9■□□□□ 0.46
CLCN6-201ENST00000312413 TSPY10P0CW01 314 aa17.9■□□□□ 0.46
CLCN6-201ENST00000312413 ZRSR1Q15695 479 aaKnown RBP17.88■□□□□ 0.45
CLCN6-201ENST00000312413 ZCCHC6Q5VYS8 1495 aaKnown RBP17.87■□□□□ 0.45
CLCN6-201ENST00000312413 RB1CC1Q8TDY2 1594 aa17.86■□□□□ 0.45
CLCN6-201ENST00000312413 MTUS2Q5JR59 1369 aa17.86■□□□□ 0.45
CLCN6-201ENST00000312413 CASC1Q6TDU7 716 aa17.83■□□□□ 0.45
CLCN6-201ENST00000312413 CLIP1P30622 1438 aa17.79■□□□□ 0.44
CLCN6-201ENST00000312413 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
CLCN6-201ENST00000312413 FTSJ3Q8IY81 847 aaKnown RBP17.78■□□□□ 0.44
CLCN6-201ENST00000312413 SENP3-EIF4A1A0A087X0R7 540 aa17.78■□□□□ 0.44
CLCN6-201ENST00000312413 RGS3P49796 1198 aa17.78■□□□□ 0.44
CLCN6-201ENST00000312413 CFAP53Q96M91 514 aa17.77■□□□□ 0.44
CLCN6-201ENST00000312413 RRP7BPQ9NSQ0 103 aa17.77■□□□□ 0.43
CLCN6-201ENST00000312413 TPRNQ4KMQ1 711 aa17.75■□□□□ 0.43
CLCN6-201ENST00000312413 DEKP35659 375 aaKnown RBP17.75■□□□□ 0.43
CLCN6-201ENST00000312413 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
CLCN6-201ENST00000312413 PLCB2Q00722 1185 aa17.74■□□□□ 0.43
CLCN6-201ENST00000312413 KNSTRNQ9Y448 316 aa17.73■□□□□ 0.43
CLCN6-201ENST00000312413 CDCA8Q53HL2 280 aa17.72■□□□□ 0.43
CLCN6-201ENST00000312413 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
CLCN6-201ENST00000312413 B4GALNT3Q6L9W6 998 aa17.71■□□□□ 0.43
CLCN6-201ENST00000312413 HSP90AB1P08238 724 aaKnown RBP17.71■□□□□ 0.43
CLCN6-201ENST00000312413 NACADO15069 1562 aa17.7■□□□□ 0.42
CLCN6-201ENST00000312413 L1TD1Q5T7N2 865 aaKnown RBP17.7■□□□□ 0.42
CLCN6-201ENST00000312413 GOLGA6L6A8MZA4 724 aa17.68■□□□□ 0.42
CLCN6-201ENST00000312413 NRDCO43847 1150 aa17.67■□□□□ 0.42
CLCN6-201ENST00000312413 CHAF1AQ13111 956 aaPredicted RBP17.66■□□□□ 0.42
CLCN6-201ENST00000312413 MSNP26038 577 aaKnown RBP17.65■□□□□ 0.42
CLCN6-201ENST00000312413 RGL3Q3MIN7 710 aa17.65■□□□□ 0.42
CLCN6-201ENST00000312413 RBM19Q9Y4C8 960 aaKnown RBP17.65■□□□□ 0.42
CLCN6-201ENST00000312413 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
CLCN6-201ENST00000312413 NEUROD2Q15784 382 aa17.64■□□□□ 0.42
CLCN6-201ENST00000312413 CARD11Q9BXL7 1154 aa17.64■□□□□ 0.42
CLCN6-201ENST00000312413 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.42
CLCN6-201ENST00000312413 MS4A1P11836 297 aa17.62■□□□□ 0.41
CLCN6-201ENST00000312413 MAPK8IP3Q9UPT6 1336 aa17.62■□□□□ 0.41
CLCN6-201ENST00000312413 HSCBQ8IWL3 235 aa17.62■□□□□ 0.41
CLCN6-201ENST00000312413 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
CLCN6-201ENST00000312413 RSF1Q96T23 1441 aaPredicted RBP17.62■□□□□ 0.41
CLCN6-201ENST00000312413 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
CLCN6-201ENST00000312413 A0A0G2JS52 829 aa17.59■□□□□ 0.41
CLCN6-201ENST00000312413 NUDCQ9Y266 331 aa17.58■□□□□ 0.41
CLCN6-201ENST00000312413 C14orf37Q86TY3 774 aa17.58■□□□□ 0.41
CLCN6-201ENST00000312413 GOLGA3Q08378 1498 aa17.57■□□□□ 0.4
CLCN6-201ENST00000312413 PPP1R15AO75807 674 aaPredicted RBP17.56■□□□□ 0.4
CLCN6-201ENST00000312413 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
CLCN6-201ENST00000312413 GOLGA6L4A6NEF3 574 aa17.56■□□□□ 0.4
CLCN6-201ENST00000312413 EEA1Q15075 1411 aa17.56■□□□□ 0.4
CLCN6-201ENST00000312413 FGD1P98174 961 aa17.55■□□□□ 0.4
CLCN6-201ENST00000312413 AMER1Q5JTC6 1135 aaPredicted RBP17.54■□□□□ 0.4
CLCN6-201ENST00000312413 SIN3AQ96ST3 1273 aa17.54■□□□□ 0.4
CLCN6-201ENST00000312413 CCER2I3L3R5 266 aa17.53■□□□□ 0.4
CLCN6-201ENST00000312413 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
CLCN6-201ENST00000312413 KCNJ4P48050 445 aa17.51■□□□□ 0.39
CLCN6-201ENST00000312413 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
CLCN6-201ENST00000312413 ARID4BQ4LE39 1312 aaPredicted RBP17.5■□□□□ 0.39
CLCN6-201ENST00000312413 PNNQ9H307 717 aaKnown RBP17.49■□□□□ 0.39
CLCN6-201ENST00000312413 CC2D1BQ5T0F9 858 aaKnown RBP17.49■□□□□ 0.39
CLCN6-201ENST00000312413 PLEKHD1A6NEE1 506 aa17.48■□□□□ 0.39
CLCN6-201ENST00000312413 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
CLCN6-201ENST00000312413 OS9Q13438 667 aaPredicted RBP17.48■□□□□ 0.39
CLCN6-201ENST00000312413 DRC7Q8IY82 874 aa17.47■□□□□ 0.39
CLCN6-201ENST00000312413 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
CLCN6-201ENST00000312413 TULP1O00294 542 aaPredicted RBP17.46■□□□□ 0.39
CLCN6-201ENST00000312413 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
CLCN6-201ENST00000312413 CFAP44Q96MT7 982 aa17.46■□□□□ 0.39
CLCN6-201ENST00000312413 MCCP23508 829 aa17.46■□□□□ 0.38
CLCN6-201ENST00000312413 PTMSP20962 102 aa17.45■□□□□ 0.38
CLCN6-201ENST00000312413 GBP4Q96PP9 640 aa17.44■□□□□ 0.38
CLCN6-201ENST00000312413 CFDP1Q9UEE9 299 aaPredicted RBP17.44■□□□□ 0.38
CLCN6-201ENST00000312413 NAP1L2Q9ULW6 460 aaPredicted RBP17.44■□□□□ 0.38
CLCN6-201ENST00000312413 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
CLCN6-201ENST00000312413 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
CLCN6-201ENST00000312413 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
CLCN6-201ENST00000312413 KIAA2012Q0VF49 1180 aa17.43■□□□□ 0.38
CLCN6-201ENST00000312413 KCNH8Q96L42 1107 aa17.41■□□□□ 0.38
CLCN6-201ENST00000312413 TCERG1O14776 1098 aaKnown RBP17.41■□□□□ 0.38
CLCN6-201ENST00000312413 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.4■□□□□ 0.38
CLCN6-201ENST00000312413 TMF1P82094 1093 aa17.39■□□□□ 0.37
CLCN6-201ENST00000312413 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
CLCN6-201ENST00000312413 TSHZ2Q9NRE2 1034 aa17.39■□□□□ 0.37
CLCN6-201ENST00000312413 SLKQ9H2G2 1235 aaPredicted RBP17.37■□□□□ 0.37
CLCN6-201ENST00000312413 POGKQ9P215 609 aa17.36■□□□□ 0.37
CLCN6-201ENST00000312413 GOLGA6L3A6NEY3 463 aa17.35■□□□□ 0.37
CLCN6-201ENST00000312413 ARID3AQ99856 593 aa17.34■□□□□ 0.37
CLCN6-201ENST00000312413 IPO9Q96P70 1041 aaKnown RBP17.34■□□□□ 0.37
CLCN6-201ENST00000312413 CEP164Q9UPV0 1460 aa17.33■□□□□ 0.36
CLCN6-201ENST00000312413 HAP1P54257 671 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms