RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 NCLP19338 710 aaKnown RBP26.19■■□□□ 1.78
CTNND2-201ENST00000304623 NPM1P06748 294 aaKnown RBP eCLIP26.18■■□□□ 1.78
CTNND2-201ENST00000304623 HIRIP3Q9BW71 556 aaPredicted RBP26.18■■□□□ 1.78
CTNND2-201ENST00000304623 CLIP1P30622 1438 aa26.18■■□□□ 1.78
CTNND2-201ENST00000304623 PPM1GO15355 546 aaPredicted RBP26.12■■□□□ 1.77
CTNND2-201ENST00000304623 ZCCHC6Q5VYS8 1495 aaKnown RBP26.05■■□□□ 1.76
CTNND2-201ENST00000304623 CDK11BP21127 795 aaKnown RBP26.05■■□□□ 1.76
CTNND2-201ENST00000304623 ERICH6BQ5W0A0 696 aa26.03■■□□□ 1.76
CTNND2-201ENST00000304623 RRP7BPQ9NSQ0 103 aa26.01■■□□□ 1.75
CTNND2-201ENST00000304623 TNNT2P45379 298 aaPredicted RBP26.01■■□□□ 1.75
CTNND2-201ENST00000304623 SUPT16HQ9Y5B9 1047 aaKnown RBP26.01■■□□□ 1.75
CTNND2-201ENST00000304623 EEA1Q15075 1411 aa25.99■■□□□ 1.75
CTNND2-201ENST00000304623 RSF1Q96T23 1441 aaPredicted RBP25.99■■□□□ 1.75
CTNND2-201ENST00000304623 PPP4R2Q9NY27 417 aa25.97■■□□□ 1.75
CTNND2-201ENST00000304623 CFAP53Q96M91 514 aa25.97■■□□□ 1.75
CTNND2-201ENST00000304623 CDCA8Q53HL2 280 aa25.96■■□□□ 1.75
CTNND2-201ENST00000304623 PTMAP06454 111 aaKnown RBP25.95■■□□□ 1.75
CTNND2-201ENST00000304623 GOLGA3Q08378 1498 aa25.94■■□□□ 1.74
CTNND2-201ENST00000304623 PLPPR3Q6T4P5 718 aa25.92■■□□□ 1.74
CTNND2-201ENST00000304623 CASC1Q6TDU7 716 aa25.92■■□□□ 1.74
CTNND2-201ENST00000304623 CEP162Q5TB80 1403 aa25.92■■□□□ 1.74
CTNND2-201ENST00000304623 KNSTRNQ9Y448 316 aa25.89■■□□□ 1.74
CTNND2-201ENST00000304623 ZRSR1Q15695 479 aaKnown RBP25.87■■□□□ 1.73
CTNND2-201ENST00000304623 NOP58Q9Y2X3 529 aaKnown RBP25.87■■□□□ 1.73
CTNND2-201ENST00000304623 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
CTNND2-201ENST00000304623 FTSJ3Q8IY81 847 aaKnown RBP25.85■■□□□ 1.73
CTNND2-201ENST00000304623 DNTTIP2Q5QJE6 756 aaKnown RBP25.84■■□□□ 1.73
CTNND2-201ENST00000304623 CHMP7Q8WUX9 453 aaPredicted RBP25.8■■□□□ 1.72
CTNND2-201ENST00000304623 LAS1LQ9Y4W2 734 aaKnown RBP25.8■■□□□ 1.72
CTNND2-201ENST00000304623 NAP1L5Q96NT1 182 aaPredicted RBP25.79■■□□□ 1.72
CTNND2-201ENST00000304623 CARD11Q9BXL7 1154 aa25.79■■□□□ 1.72
CTNND2-201ENST00000304623 RGL3Q3MIN7 710 aa25.78■■□□□ 1.72
CTNND2-201ENST00000304623 MYO15BQ96JP2 1530 aa25.77■■□□□ 1.72
CTNND2-201ENST00000304623 PLEKHD1A6NEE1 506 aa25.76■■□□□ 1.71
CTNND2-201ENST00000304623 PPP1R15AO75807 674 aaPredicted RBP25.75■■□□□ 1.71
CTNND2-201ENST00000304623 CHMP4BQ9H444 224 aaKnown RBP25.74■■□□□ 1.71
CTNND2-201ENST00000304623 RGS3P49796 1198 aa25.72■■□□□ 1.71
CTNND2-201ENST00000304623 TNIKQ9UKE5 1360 aa25.72■■□□□ 1.71
CTNND2-201ENST00000304623 MS4A1P11836 297 aa25.71■■□□□ 1.71
CTNND2-201ENST00000304623 MAPK8IP3Q9UPT6 1336 aa25.71■■□□□ 1.71
CTNND2-201ENST00000304623 SENP3-EIF4A1A0A087X0R7 540 aa25.7■■□□□ 1.7
CTNND2-201ENST00000304623 NUDCQ9Y266 331 aa25.7■■□□□ 1.7
CTNND2-201ENST00000304623 ZBTB7CA1YPR0 619 aa25.68■■□□□ 1.7
CTNND2-201ENST00000304623 C14orf37Q86TY3 774 aa25.68■■□□□ 1.7
CTNND2-201ENST00000304623 RTN4Q9NQC3 1192 aaKnown RBP25.65■■□□□ 1.7
CTNND2-201ENST00000304623 CFDP1Q9UEE9 299 aaPredicted RBP25.65■■□□□ 1.7
CTNND2-201ENST00000304623 HSP90AB1P08238 724 aaKnown RBP25.65■■□□□ 1.7
CTNND2-201ENST00000304623 NEUROD2Q15784 382 aa25.64■■□□□ 1.7
CTNND2-201ENST00000304623 FRAT1Q92837 279 aaPredicted RBP25.62■■□□□ 1.69
CTNND2-201ENST00000304623 A0A0G2JS52 829 aa25.62■■□□□ 1.69
CTNND2-201ENST00000304623 CEP164Q9UPV0 1460 aa25.62■■□□□ 1.69
CTNND2-201ENST00000304623 B4GALNT3Q6L9W6 998 aa25.61■■□□□ 1.69
CTNND2-201ENST00000304623 GOLGA6L6A8MZA4 724 aa25.6■■□□□ 1.69
CTNND2-201ENST00000304623 SIN3AQ96ST3 1273 aa25.6■■□□□ 1.69
CTNND2-201ENST00000304623 KCNH8Q96L42 1107 aa25.6■■□□□ 1.69
CTNND2-201ENST00000304623 TPRNQ4KMQ1 711 aa25.58■■□□□ 1.69
CTNND2-201ENST00000304623 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.69
CTNND2-201ENST00000304623 L1TD1Q5T7N2 865 aaKnown RBP25.58■■□□□ 1.68
CTNND2-201ENST00000304623 CCER2I3L3R5 266 aa25.57■■□□□ 1.68
CTNND2-201ENST00000304623 TIMELESSQ9UNS1 1208 aa25.57■■□□□ 1.68
CTNND2-201ENST00000304623 PLCB2Q00722 1185 aa25.57■■□□□ 1.68
CTNND2-201ENST00000304623 NRDCO43847 1150 aa25.55■■□□□ 1.68
CTNND2-201ENST00000304623 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
CTNND2-201ENST00000304623 HSCBQ8IWL3 235 aa25.54■■□□□ 1.68
CTNND2-201ENST00000304623 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
CTNND2-201ENST00000304623 PNNQ9H307 717 aaKnown RBP25.52■■□□□ 1.68
CTNND2-201ENST00000304623 DEKP35659 375 aaKnown RBP25.5■■□□□ 1.67
CTNND2-201ENST00000304623 CC2D1BQ5T0F9 858 aaKnown RBP25.49■■□□□ 1.67
CTNND2-201ENST00000304623 PLEKHG5O94827 1062 aa25.48■■□□□ 1.67
CTNND2-201ENST00000304623 CHAF1AQ13111 956 aaPredicted RBP25.47■■□□□ 1.67
CTNND2-201ENST00000304623 RBM19Q9Y4C8 960 aaKnown RBP25.47■■□□□ 1.67
CTNND2-201ENST00000304623 TMF1P82094 1093 aa25.45■■□□□ 1.67
CTNND2-201ENST00000304623 CFAP44Q96MT7 982 aa25.45■■□□□ 1.66
CTNND2-201ENST00000304623 MSNP26038 577 aaKnown RBP25.44■■□□□ 1.66
CTNND2-201ENST00000304623 FGD1P98174 961 aa25.44■■□□□ 1.66
CTNND2-201ENST00000304623 CCNB3Q8WWL7 1395 aa25.44■■□□□ 1.66
CTNND2-201ENST00000304623 POGKQ9P215 609 aa25.43■■□□□ 1.66
CTNND2-201ENST00000304623 OS9Q13438 667 aaPredicted RBP25.42■■□□□ 1.66
CTNND2-201ENST00000304623 GOLGA6L4A6NEF3 574 aa25.42■■□□□ 1.66
CTNND2-201ENST00000304623 KCNJ4P48050 445 aa25.42■■□□□ 1.66
CTNND2-201ENST00000304623 U2SURPO15042 1029 aaKnown RBP25.41■■□□□ 1.66
CTNND2-201ENST00000304623 MCCP23508 829 aa25.38■■□□□ 1.65
CTNND2-201ENST00000304623 HAP1P54257 671 aaPredicted RBP25.36■■□□□ 1.65
CTNND2-201ENST00000304623 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
CTNND2-201ENST00000304623 PTMSP20962 102 aa25.33■■□□□ 1.65
CTNND2-201ENST00000304623 DCAF11Q8TEB1 546 aa25.31■■□□□ 1.64
CTNND2-201ENST00000304623 NAP1L2Q9ULW6 460 aaPredicted RBP25.28■■□□□ 1.64
CTNND2-201ENST00000304623 TCERG1O14776 1098 aaKnown RBP25.27■■□□□ 1.64
CTNND2-201ENST00000304623 HSPA5P11021 654 aaKnown RBP25.26■■□□□ 1.64
CTNND2-201ENST00000304623 GBP4Q96PP9 640 aa25.26■■□□□ 1.64
CTNND2-201ENST00000304623 SETD5Q9C0A6 1442 aa25.25■■□□□ 1.63
CTNND2-201ENST00000304623 BAZ1BQ9UIG0 1483 aaKnown RBP25.25■■□□□ 1.63
CTNND2-201ENST00000304623 MORC1Q86VD1 984 aa25.24■■□□□ 1.63
CTNND2-201ENST00000304623 SPRYD3Q8NCJ5 442 aa25.24■■□□□ 1.63
CTNND2-201ENST00000304623 KTN1Q86UP2 1357 aaKnown RBP25.23■■□□□ 1.63
CTNND2-201ENST00000304623 DRC7Q8IY82 874 aa25.23■■□□□ 1.63
CTNND2-201ENST00000304623 TAOK2Q9UL54 1235 aa25.23■■□□□ 1.63
CTNND2-201ENST00000304623 IPO8O15397 1037 aaKnown RBP25.22■■□□□ 1.63
CTNND2-201ENST00000304623 ARID4BQ4LE39 1312 aaPredicted RBP25.22■■□□□ 1.63
CTNND2-201ENST00000304623 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms