RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 KRI1Q8N9T8 703 aaKnown RBP17.6■□□□□ 0.41
PLXNB1-201ENST00000296440 TMX4Q9H1E5 349 aaPredicted RBP17.59■□□□□ 0.41
PLXNB1-201ENST00000296440 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
PLXNB1-201ENST00000296440 ZRSR1Q15695 479 aaKnown RBP17.57■□□□□ 0.4
PLXNB1-201ENST00000296440 PRM3Q9NNZ6 103 aa17.56■□□□□ 0.4
PLXNB1-201ENST00000296440 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
PLXNB1-201ENST00000296440 MLECQ14165 292 aa17.53■□□□□ 0.4
PLXNB1-201ENST00000296440 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
PLXNB1-201ENST00000296440 NCLP19338 710 aaKnown RBP17.5■□□□□ 0.39
PLXNB1-201ENST00000296440 EIF4G2P78344 907 aaKnown RBP eCLIP17.49■□□□□ 0.391e-6■■■■■ 28.1
PLXNB1-201ENST00000296440 TPRNQ4KMQ1 711 aa17.49■□□□□ 0.39
PLXNB1-201ENST00000296440 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
PLXNB1-201ENST00000296440 LAS1LQ9Y4W2 734 aaKnown RBP17.46■□□□□ 0.39
PLXNB1-201ENST00000296440 POGKQ9P215 609 aa17.46■□□□□ 0.39
PLXNB1-201ENST00000296440 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
PLXNB1-201ENST00000296440 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
PLXNB1-201ENST00000296440 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
PLXNB1-201ENST00000296440 OS9Q13438 667 aaPredicted RBP17.43■□□□□ 0.38
PLXNB1-201ENST00000296440 G3V3G9 751 aa17.42■□□□□ 0.38
PLXNB1-201ENST00000296440 DCAF8Q5TAQ9 597 aa17.42■□□□□ 0.38
PLXNB1-201ENST00000296440 ERCC6Q03468 1493 aa17.39■□□□□ 0.37
PLXNB1-201ENST00000296440 CASC1Q6TDU7 716 aa17.39■□□□□ 0.37
PLXNB1-201ENST00000296440 FGD1P98174 961 aa17.38■□□□□ 0.37
PLXNB1-201ENST00000296440 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
PLXNB1-201ENST00000296440 SOX12O15370 315 aa17.38■□□□□ 0.37
PLXNB1-201ENST00000296440 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
PLXNB1-201ENST00000296440 RGL3Q3MIN7 710 aa17.36■□□□□ 0.37
PLXNB1-201ENST00000296440 PLEKHD1A6NEE1 506 aa17.36■□□□□ 0.37
PLXNB1-201ENST00000296440 HDGFP51858 240 aaKnown RBP17.34■□□□□ 0.37
PLXNB1-201ENST00000296440 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.377e-11■□□□□ 8.3
PLXNB1-201ENST00000296440 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
PLXNB1-201ENST00000296440 CSB-PGBD3P0DP91 1061 aa17.32■□□□□ 0.36
PLXNB1-201ENST00000296440 KCNJ4P48050 445 aa17.28■□□□□ 0.36
PLXNB1-201ENST00000296440 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
PLXNB1-201ENST00000296440 MEX3CQ5U5Q3 659 aaKnown RBP17.28■□□□□ 0.36
PLXNB1-201ENST00000296440 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
PLXNB1-201ENST00000296440 MTUS2Q5JR59 1369 aa17.27■□□□□ 0.36
PLXNB1-201ENST00000296440 TRIM44Q96DX7 344 aaPredicted RBP17.27■□□□□ 0.36
PLXNB1-201ENST00000296440 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
PLXNB1-201ENST00000296440 MSH5O43196 834 aa17.26■□□□□ 0.35
PLXNB1-201ENST00000296440 CCDC136Q96JN2 1154 aa17.26■□□□□ 0.35
PLXNB1-201ENST00000296440 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
PLXNB1-201ENST00000296440 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
PLXNB1-201ENST00000296440 TNNT2P45379 298 aaPredicted RBP17.2■□□□□ 0.34
PLXNB1-201ENST00000296440 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
PLXNB1-201ENST00000296440 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
PLXNB1-201ENST00000296440 GOLGA6L22H0YM25 854 aa17.19■□□□□ 0.34
PLXNB1-201ENST00000296440 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
PLXNB1-201ENST00000296440 PTMAP06454 111 aaKnown RBP17.18■□□□□ 0.34
PLXNB1-201ENST00000296440 RRP7BPQ9NSQ0 103 aa17.17■□□□□ 0.34
PLXNB1-201ENST00000296440 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
PLXNB1-201ENST00000296440 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
PLXNB1-201ENST00000296440 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
PLXNB1-201ENST00000296440 FKBP8Q14318 412 aa17.15■□□□□ 0.34
PLXNB1-201ENST00000296440 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
PLXNB1-201ENST00000296440 GTF3C3Q9Y5Q9 886 aa17.15■□□□□ 0.34
PLXNB1-201ENST00000296440 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
PLXNB1-201ENST00000296440 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
PLXNB1-201ENST00000296440 GNL2Q13823 731 aaKnown RBP17.13■□□□□ 0.33
PLXNB1-201ENST00000296440 GOLGA6L6A8MZA4 724 aa17.13■□□□□ 0.33
PLXNB1-201ENST00000296440 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
PLXNB1-201ENST00000296440 PLCB2Q00722 1185 aa17.12■□□□□ 0.33
PLXNB1-201ENST00000296440 BECN1Q14457 450 aa17.11■□□□□ 0.33
PLXNB1-201ENST00000296440 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
PLXNB1-201ENST00000296440 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
PLXNB1-201ENST00000296440 GTF2E1P29083 439 aaPredicted RBP17.1■□□□□ 0.33
PLXNB1-201ENST00000296440 SRPK2P78362 688 aaKnown RBP17.09■□□□□ 0.33
PLXNB1-201ENST00000296440 DNTTIP2Q5QJE6 756 aaKnown RBP17.09■□□□□ 0.33
PLXNB1-201ENST00000296440 CWC22Q9HCG8 908 aaKnown RBP17.09■□□□□ 0.33
PLXNB1-201ENST00000296440 PNNQ9H307 717 aaKnown RBP17.09■□□□□ 0.33
PLXNB1-201ENST00000296440 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
PLXNB1-201ENST00000296440 PDE4CQ08493 712 aa17.07■□□□□ 0.32
PLXNB1-201ENST00000296440 NBR1Q14596 966 aa17.07■□□□□ 0.32
PLXNB1-201ENST00000296440 CFDP1Q9UEE9 299 aaPredicted RBP17.07■□□□□ 0.32
PLXNB1-201ENST00000296440 TAF7LQ5H9L4 462 aa17.07■□□□□ 0.32
PLXNB1-201ENST00000296440 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
PLXNB1-201ENST00000296440 VPS53Q5VIR6 699 aa17.06■□□□□ 0.32
PLXNB1-201ENST00000296440 GLIPR1L2Q4G1C9 344 aa17.06■□□□□ 0.32
PLXNB1-201ENST00000296440 KANK1Q14678 1352 aa17.04■□□□□ 0.32
PLXNB1-201ENST00000296440 CHMP3Q9Y3E7 222 aa17.04■□□□□ 0.32
PLXNB1-201ENST00000296440 FRAT2O75474 233 aaPredicted RBP17.03■□□□□ 0.32
PLXNB1-201ENST00000296440 STK26Q9P289 416 aa17.03■□□□□ 0.32
PLXNB1-201ENST00000296440 ANO8Q9HCE9 1232 aaPredicted RBP17.02■□□□□ 0.31
PLXNB1-201ENST00000296440 GORABQ5T7V8 394 aa17.01■□□□□ 0.31
PLXNB1-201ENST00000296440 GOLGA6L4A6NEF3 574 aa17.01■□□□□ 0.31
PLXNB1-201ENST00000296440 GGT6Q6P531 493 aa17■□□□□ 0.31
PLXNB1-201ENST00000296440 EVA1CP58658 441 aa17■□□□□ 0.31
PLXNB1-201ENST00000296440 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
PLXNB1-201ENST00000296440 NRDCO43847 1150 aa16.99■□□□□ 0.31
PLXNB1-201ENST00000296440 CTDP1Q9Y5B0 961 aaPredicted RBP16.99■□□□□ 0.31
PLXNB1-201ENST00000296440 NOC3LQ8WTT2 800 aaKnown RBP16.99■□□□□ 0.31
PLXNB1-201ENST00000296440 CHAF1AQ13111 956 aaPredicted RBP16.98■□□□□ 0.31
PLXNB1-201ENST00000296440 CHMP4BQ9H444 224 aaKnown RBP16.98■□□□□ 0.31
PLXNB1-201ENST00000296440 FRAT1Q92837 279 aaPredicted RBP16.98■□□□□ 0.31
PLXNB1-201ENST00000296440 HIRIP3Q9BW71 556 aaPredicted RBP16.97■□□□□ 0.31
PLXNB1-201ENST00000296440 EID1Q9Y6B2 187 aa16.97■□□□□ 0.31
PLXNB1-201ENST00000296440 L1TD1Q5T7N2 865 aaKnown RBP16.96■□□□□ 0.3
PLXNB1-201ENST00000296440 CARD11Q9BXL7 1154 aa16.94■□□□□ 0.3
PLXNB1-201ENST00000296440 TRIM34Q9BYJ4 488 aa16.94■□□□□ 0.3
PLXNB1-201ENST00000296440 IRX6P78412 446 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms