RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 NPM1P06748 294 aaKnown RBP eCLIP21.72■■□□□ 1.07
HDAC5-201ENST00000225983 WDR43Q15061 677 aaKnown RBP eCLIP21.71■■□□□ 1.07
HDAC5-201ENST00000225983 BAZ1BQ9UIG0 1483 aaKnown RBP21.67■■□□□ 1.06
HDAC5-201ENST00000225983 NBR1Q14596 966 aa21.67■■□□□ 1.06
HDAC5-201ENST00000225983 CEP164Q9UPV0 1460 aa21.65■■□□□ 1.06
HDAC5-201ENST00000225983 HSP90AA1P07900 732 aaKnown RBP21.65■■□□□ 1.06
HDAC5-201ENST00000225983 SENP3-EIF4A1A0A087X0R7 540 aa21.65■■□□□ 1.06
HDAC5-201ENST00000225983 UPF2Q9HAU5 1272 aaKnown RBP21.65■■□□□ 1.06
HDAC5-201ENST00000225983 NACADO15069 1562 aa21.64■■□□□ 1.05
HDAC5-201ENST00000225983 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
HDAC5-201ENST00000225983 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.61■■□□□ 1.05
HDAC5-201ENST00000225983 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
HDAC5-201ENST00000225983 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
HDAC5-201ENST00000225983 SIN3AQ96ST3 1273 aa21.59■■□□□ 1.05
HDAC5-201ENST00000225983 KCNH8Q96L42 1107 aa21.58■■□□□ 1.05
HDAC5-201ENST00000225983 RGL3Q3MIN7 710 aa21.57■■□□□ 1.04
HDAC5-201ENST00000225983 PLEKHD1A6NEE1 506 aa21.53■■□□□ 1.04
HDAC5-201ENST00000225983 SOGA1O94964 1423 aa21.52■■□□□ 1.04
HDAC5-201ENST00000225983 BAZ1AQ9NRL2 1556 aaPredicted RBP21.49■■□□□ 1.03
HDAC5-201ENST00000225983 CFDP1Q9UEE9 299 aaPredicted RBP21.49■■□□□ 1.03
HDAC5-201ENST00000225983 EIF5BO60841 1220 aaKnown RBP21.49■■□□□ 1.03
HDAC5-201ENST00000225983 SUPT16HQ9Y5B9 1047 aaKnown RBP21.48■■□□□ 1.03
HDAC5-201ENST00000225983 ANP32BQ92688 251 aaKnown RBP21.47■■□□□ 1.03
HDAC5-201ENST00000225983 ARXQ96QS3 562 aa21.47■■□□□ 1.03
HDAC5-201ENST00000225983 CARD11Q9BXL7 1154 aa21.42■■□□□ 1.02
HDAC5-201ENST00000225983 CCNB3Q8WWL7 1395 aa21.39■■□□□ 1.02
HDAC5-201ENST00000225983 ABCC8Q09428 1581 aa21.33■■□□□ 1
HDAC5-201ENST00000225983 KNSTRNQ9Y448 316 aa21.32■■□□□ 1
HDAC5-201ENST00000225983 MROH2BQ7Z745 1585 aa21.31■■□□□ 1
HDAC5-201ENST00000225983 CARMIL1Q5VZK9 1371 aa21.3■■□□□ 1
HDAC5-201ENST00000225983 CUX2O14529 1486 aa21.3■■□□□ 1
HDAC5-201ENST00000225983 MYH16Q9H6N6 1097 aa21.28■■□□□ 1
HDAC5-201ENST00000225983 PPP1R15AO75807 674 aaPredicted RBP21.28■■□□□ 1
HDAC5-201ENST00000225983 PLEKHG5O94827 1062 aa21.28■■□□□ 1
HDAC5-201ENST00000225983 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
HDAC5-201ENST00000225983 CCDC88BA6NC98 1476 aa21.27■■□□□ 1
HDAC5-201ENST00000225983 FHAD1B1AJZ9 1412 aa21.26■□□□□ 0.99
HDAC5-201ENST00000225983 NEUROD2Q15784 382 aa21.24■□□□□ 0.99
HDAC5-201ENST00000225983 VPS8Q8N3P4 1428 aa21.24■□□□□ 0.99
HDAC5-201ENST00000225983 ZBTB7CA1YPR0 619 aa21.24■□□□□ 0.99
HDAC5-201ENST00000225983 CDCA8Q53HL2 280 aa21.23■□□□□ 0.99
HDAC5-201ENST00000225983 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
HDAC5-201ENST00000225983 CC2D1BQ5T0F9 858 aaKnown RBP21.22■□□□□ 0.99
HDAC5-201ENST00000225983 DDRGK1Q96HY6 314 aa21.21■□□□□ 0.99
HDAC5-201ENST00000225983 CFAP53Q96M91 514 aa21.21■□□□□ 0.99
HDAC5-201ENST00000225983 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.99
HDAC5-201ENST00000225983 PPP4R2Q9NY27 417 aa21.2■□□□□ 0.98
HDAC5-201ENST00000225983 C14orf37Q86TY3 774 aa21.2■□□□□ 0.98
HDAC5-201ENST00000225983 ANP32EQ9BTT0 268 aa21.18■□□□□ 0.98
HDAC5-201ENST00000225983 SETD5Q9C0A6 1442 aa21.17■□□□□ 0.98
HDAC5-201ENST00000225983 BECN1Q14457 450 aa21.17■□□□□ 0.98
HDAC5-201ENST00000225983 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
HDAC5-201ENST00000225983 B4GALNT3Q6L9W6 998 aa21.16■□□□□ 0.98
HDAC5-201ENST00000225983 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
HDAC5-201ENST00000225983 FOXD1Q16676 465 aa21.13■□□□□ 0.97
HDAC5-201ENST00000225983 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
HDAC5-201ENST00000225983 FTSJ3Q8IY81 847 aaKnown RBP21.11■□□□□ 0.97
HDAC5-201ENST00000225983 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
HDAC5-201ENST00000225983 RGS3P49796 1198 aa21.11■□□□□ 0.97
HDAC5-201ENST00000225983 ARHGAP35Q9NRY4 1499 aa21.1■□□□□ 0.97
HDAC5-201ENST00000225983 TIMELESSQ9UNS1 1208 aa21.1■□□□□ 0.97
HDAC5-201ENST00000225983 FRAT1Q92837 279 aaPredicted RBP21.09■□□□□ 0.97
HDAC5-201ENST00000225983 LAS1LQ9Y4W2 734 aaKnown RBP21.09■□□□□ 0.97
HDAC5-201ENST00000225983 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
HDAC5-201ENST00000225983 CCER2I3L3R5 266 aa21.06■□□□□ 0.96
HDAC5-201ENST00000225983 MAPK8IP3Q9UPT6 1336 aa21.05■□□□□ 0.96
HDAC5-201ENST00000225983 A0A0G2JS52 829 aa21.05■□□□□ 0.96
HDAC5-201ENST00000225983 ARID4BQ4LE39 1312 aaPredicted RBP21.04■□□□□ 0.96
HDAC5-201ENST00000225983 POGKQ9P215 609 aa21.03■□□□□ 0.96
HDAC5-201ENST00000225983 WIZO95785 1651 aa21.03■□□□□ 0.96
HDAC5-201ENST00000225983 TMF1P82094 1093 aa21.03■□□□□ 0.96
HDAC5-201ENST00000225983 PKD2Q13563 968 aa21.01■□□□□ 0.95
HDAC5-201ENST00000225983 NUDCQ9Y266 331 aa21■□□□□ 0.95
HDAC5-201ENST00000225983 NOP58Q9Y2X3 529 aaKnown RBP20.99■□□□□ 0.95
HDAC5-201ENST00000225983 U2SURPO15042 1029 aaKnown RBP20.99■□□□□ 0.95
HDAC5-201ENST00000225983 NCLP19338 710 aaKnown RBP20.97■□□□□ 0.95
HDAC5-201ENST00000225983 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
HDAC5-201ENST00000225983 GOLGA6L22H0YM25 854 aa20.95■□□□□ 0.94
HDAC5-201ENST00000225983 MPHOSPH9Q99550 1183 aa20.94■□□□□ 0.94
HDAC5-201ENST00000225983 TRIM44Q96DX7 344 aaPredicted RBP20.93■□□□□ 0.94
HDAC5-201ENST00000225983 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
HDAC5-201ENST00000225983 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
HDAC5-201ENST00000225983 GLIPR1L2Q4G1C9 344 aa20.92■□□□□ 0.94
HDAC5-201ENST00000225983 TPRNQ4KMQ1 711 aa20.91■□□□□ 0.94
HDAC5-201ENST00000225983 SAFB2Q14151 953 aaKnown RBP eCLIP20.9■□□□□ 0.94
HDAC5-201ENST00000225983 RBM19Q9Y4C8 960 aaKnown RBP20.9■□□□□ 0.94
HDAC5-201ENST00000225983 CASC1Q6TDU7 716 aa20.89■□□□□ 0.93
HDAC5-201ENST00000225983 KANK1Q14678 1352 aa20.88■□□□□ 0.93
HDAC5-201ENST00000225983 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
HDAC5-201ENST00000225983 FMN1Q68DA7 1419 aa20.87■□□□□ 0.93
HDAC5-201ENST00000225983 MORC1Q86VD1 984 aa20.85■□□□□ 0.93
HDAC5-201ENST00000225983 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
HDAC5-201ENST00000225983 SRPK2P78362 688 aaKnown RBP20.85■□□□□ 0.93
HDAC5-201ENST00000225983 KTN1Q86UP2 1357 aaKnown RBP20.84■□□□□ 0.93
HDAC5-201ENST00000225983 RTN4Q9NQC3 1192 aaKnown RBP20.84■□□□□ 0.93
HDAC5-201ENST00000225983 NUP155O75694 1391 aa20.84■□□□□ 0.93
HDAC5-201ENST00000225983 LMOD2Q6P5Q4 547 aa20.84■□□□□ 0.93
HDAC5-201ENST00000225983 ROCK2O75116 1388 aaKnown RBP20.82■□□□□ 0.92
HDAC5-201ENST00000225983 RUSC2Q8N2Y8 1516 aa20.82■□□□□ 0.92
HDAC5-201ENST00000225983 GGT6Q6P531 493 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms