RNA–Protein interactions for RNA: ENST00000181839.8

CDK13-201, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK13, Length 7,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-201ENST00000181839 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.95■■□□□ 1.43
CDK13-201ENST00000181839 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
CDK13-201ENST00000181839 TONSLQ96HA7 1378 aa23.91■■□□□ 1.42
CDK13-201ENST00000181839 LAS1LQ9Y4W2 734 aaKnown RBP23.89■■□□□ 1.42
CDK13-201ENST00000181839 ISY1Q9ULR0 285 aaKnown RBP23.86■■□□□ 1.41
CDK13-201ENST00000181839 IRX6P78412 446 aaPredicted RBP23.85■■□□□ 1.41
CDK13-201ENST00000181839 NCLP19338 710 aaKnown RBP23.84■■□□□ 1.41
CDK13-201ENST00000181839 DDX10Q13206 875 aaKnown RBP23.84■■□□□ 1.41
CDK13-201ENST00000181839 AMER1Q5JTC6 1135 aaPredicted RBP23.82■■□□□ 1.4
CDK13-201ENST00000181839 NAP1L2Q9ULW6 460 aaPredicted RBP23.81■■□□□ 1.4
CDK13-201ENST00000181839 ZRSR1Q15695 479 aaKnown RBP23.81■■□□□ 1.4
CDK13-201ENST00000181839 CCDC136Q96JN2 1154 aa23.81■■□□□ 1.4
CDK13-201ENST00000181839 GOLGA2Q08379 1002 aa23.79■■□□□ 1.4
CDK13-201ENST00000181839 HIRIP3Q9BW71 556 aaPredicted RBP23.78■■□□□ 1.4
CDK13-201ENST00000181839 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
CDK13-201ENST00000181839 PRM3Q9NNZ6 103 aa23.72■■□□□ 1.39
CDK13-201ENST00000181839 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.72■■□□□ 1.39
CDK13-201ENST00000181839 SOX12O15370 315 aa23.71■■□□□ 1.39
CDK13-201ENST00000181839 RGL3Q3MIN7 710 aa23.71■■□□□ 1.39
CDK13-201ENST00000181839 TSPY4P0CV99 314 aa23.69■■□□□ 1.38
CDK13-201ENST00000181839 TSPY10P0CW01 314 aa23.69■■□□□ 1.38
CDK13-201ENST00000181839 OS9Q13438 667 aaPredicted RBP23.63■■□□□ 1.37
CDK13-201ENST00000181839 TNNT2P45379 298 aaPredicted RBP23.63■■□□□ 1.37
CDK13-201ENST00000181839 PLCB2Q00722 1185 aa23.62■■□□□ 1.37
CDK13-201ENST00000181839 MLECQ14165 292 aa23.62■■□□□ 1.37
CDK13-201ENST00000181839 NEUROD2Q15784 382 aa23.62■■□□□ 1.37
CDK13-201ENST00000181839 PTMAP06454 111 aaKnown RBP23.61■■□□□ 1.37
CDK13-201ENST00000181839 GLIPR1L2Q4G1C9 344 aa23.6■■□□□ 1.37
CDK13-201ENST00000181839 DNTTIP2Q5QJE6 756 aaKnown RBP23.59■■□□□ 1.37
CDK13-201ENST00000181839 MRS2Q9HD23 443 aa23.59■■□□□ 1.37
CDK13-201ENST00000181839 FGD1P98174 961 aa23.58■■□□□ 1.36
CDK13-201ENST00000181839 ANO8Q9HCE9 1232 aaPredicted RBP23.55■■□□□ 1.36
CDK13-201ENST00000181839 CASC1Q6TDU7 716 aa23.55■■□□□ 1.36
CDK13-201ENST00000181839 TRIM44Q96DX7 344 aaPredicted RBP23.55■■□□□ 1.36
CDK13-201ENST00000181839 RRP7BPQ9NSQ0 103 aa23.53■■□□□ 1.36
CDK13-201ENST00000181839 FTSJ3Q8IY81 847 aaKnown RBP23.52■■□□□ 1.36
CDK13-201ENST00000181839 CCDC9Q9Y3X0 531 aaKnown RBP23.52■■□□□ 1.36
CDK13-201ENST00000181839 ZNF330Q9Y3S2 320 aaPredicted RBP23.5■■□□□ 1.35
CDK13-201ENST00000181839 POGKQ9P215 609 aa23.5■■□□□ 1.35
CDK13-201ENST00000181839 PDE4CQ08493 712 aa23.48■■□□□ 1.35
CDK13-201ENST00000181839 KCNJ4P48050 445 aa23.48■■□□□ 1.35
CDK13-201ENST00000181839 CSRNP3Q8WYN3 585 aa23.45■■□□□ 1.34
CDK13-201ENST00000181839 GOLGA6L22H0YM25 854 aa23.41■■□□□ 1.34
CDK13-201ENST00000181839 CFAP53Q96M91 514 aa23.4■■□□□ 1.34
CDK13-201ENST00000181839 BECN1Q14457 450 aa23.4■■□□□ 1.34
CDK13-201ENST00000181839 U2SURPO15042 1029 aaKnown RBP23.36■■□□□ 1.33
CDK13-201ENST00000181839 MAPK8IP3Q9UPT6 1336 aa23.36■■□□□ 1.33
CDK13-201ENST00000181839 MTUS2Q5JR59 1369 aa23.35■■□□□ 1.33
CDK13-201ENST00000181839 PAK3O75914 559 aaPredicted RBP23.34■■□□□ 1.33
CDK13-201ENST00000181839 FRAT1Q92837 279 aaPredicted RBP23.34■■□□□ 1.33
CDK13-201ENST00000181839 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
CDK13-201ENST00000181839 SAFB2Q14151 953 aaKnown RBP eCLIP23.33■■□□□ 1.33
CDK13-201ENST00000181839 SCRIBQ14160 1630 aa23.33■■□□□ 1.33
CDK13-201ENST00000181839 KRI1Q8N9T8 703 aaKnown RBP23.31■■□□□ 1.32
CDK13-201ENST00000181839 ERICH6BQ5W0A0 696 aa23.31■■□□□ 1.32
CDK13-201ENST00000181839 TMX4Q9H1E5 349 aaPredicted RBP23.31■■□□□ 1.32
CDK13-201ENST00000181839 KNSTRNQ9Y448 316 aa23.29■■□□□ 1.32
CDK13-201ENST00000181839 G3V3G9 751 aa23.29■■□□□ 1.32
CDK13-201ENST00000181839 DCAF8Q5TAQ9 597 aa23.29■■□□□ 1.32
CDK13-201ENST00000181839 FBXO3Q9UK99 471 aa23.27■■□□□ 1.32
CDK13-201ENST00000181839 GNL2Q13823 731 aaKnown RBP23.25■■□□□ 1.31
CDK13-201ENST00000181839 CC2D1BQ5T0F9 858 aaKnown RBP23.24■■□□□ 1.31
CDK13-201ENST00000181839 CSB-PGBD3P0DP91 1061 aa23.24■■□□□ 1.31
CDK13-201ENST00000181839 HSP90AB1P08238 724 aaKnown RBP23.21■■□□□ 1.31
CDK13-201ENST00000181839 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
CDK13-201ENST00000181839 GOLGA6L6A8MZA4 724 aa23.21■■□□□ 1.31
CDK13-201ENST00000181839 APBB1O00213 710 aa23.2■■□□□ 1.3
CDK13-201ENST00000181839 SPRYD3Q8NCJ5 442 aa23.19■■□□□ 1.3
CDK13-201ENST00000181839 RGS3P49796 1198 aa23.19■■□□□ 1.3
CDK13-201ENST00000181839 DDRGK1Q96HY6 314 aa23.17■■□□□ 1.3
CDK13-201ENST00000181839 STK26Q9P289 416 aa23.16■■□□□ 1.3
CDK13-201ENST00000181839 EIF4G2P78344 907 aaKnown RBP eCLIP23.15■■□□□ 1.3
CDK13-201ENST00000181839 DRC7Q8IY82 874 aa23.15■■□□□ 1.3
CDK13-201ENST00000181839 GOLGA6L4A6NEF3 574 aa23.14■■□□□ 1.3
CDK13-201ENST00000181839 AEBP2Q6ZN18 517 aaPredicted RBP23.14■■□□□ 1.29
CDK13-201ENST00000181839 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
CDK13-201ENST00000181839 NOC3LQ8WTT2 800 aaKnown RBP23.14■■□□□ 1.29
CDK13-201ENST00000181839 CHMP3Q9Y3E7 222 aa23.14■■□□□ 1.29
CDK13-201ENST00000181839 SRPK2P78362 688 aaKnown RBP23.13■■□□□ 1.29
CDK13-201ENST00000181839 WWC1Q8IX03 1113 aa23.12■■□□□ 1.29
CDK13-201ENST00000181839 MSH5O43196 834 aa23.12■■□□□ 1.29
CDK13-201ENST00000181839 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
CDK13-201ENST00000181839 VPS53Q5VIR6 699 aa23.1■■□□□ 1.29
CDK13-201ENST00000181839 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
CDK13-201ENST00000181839 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
CDK13-201ENST00000181839 KLHL34Q8N239 644 aa23.09■■□□□ 1.29
CDK13-201ENST00000181839 RTN4Q9NQC3 1192 aaKnown RBP23.09■■□□□ 1.29
CDK13-201ENST00000181839 CARD11Q9BXL7 1154 aa23.09■■□□□ 1.29
CDK13-201ENST00000181839 PNNQ9H307 717 aaKnown RBP23.06■■□□□ 1.28
CDK13-201ENST00000181839 RTF1Q92541 710 aaKnown RBP23.06■■□□□ 1.28
CDK13-201ENST00000181839 KIAA2012Q0VF49 1180 aa23.06■■□□□ 1.28
CDK13-201ENST00000181839 CREBRFQ8IUR6 639 aa23.04■■□□□ 1.28
CDK13-201ENST00000181839 CFDP1Q9UEE9 299 aaPredicted RBP23.01■■□□□ 1.27
CDK13-201ENST00000181839 TAF7LQ5H9L4 462 aa23■■□□□ 1.27
CDK13-201ENST00000181839 CDCA8Q53HL2 280 aa23■■□□□ 1.27
CDK13-201ENST00000181839 GORABQ5T7V8 394 aa22.96■■□□□ 1.27
CDK13-201ENST00000181839 HSP90B1P14625 803 aaKnown RBP22.96■■□□□ 1.27
CDK13-201ENST00000181839 NRDCO43847 1150 aa22.96■■□□□ 1.27
CDK13-201ENST00000181839 CNKSR2Q8WXI2 1034 aa22.95■■□□□ 1.26
CDK13-201ENST00000181839 FRAT2O75474 233 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms