RNA–Protein interactions for RNA: ENSMUST00000187560.1

Gm28240-201, mousemouse

BASIC

Gene Gm28240, Length 2,053 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28240-201ENSMUST00000187560 VaspP70460 375 aaKnown RBP12.97□□□□□ -0.33
Gm28240-201ENSMUST00000187560 ChgaP26339 463 aaKnown RBP12.93□□□□□ -0.34
Gm28240-201ENSMUST00000187560 Cnksr2Q80YA9 1032 aa12.93□□□□□ -0.34
Gm28240-201ENSMUST00000187560 Sra1Q80VJ2 232 aa12.91□□□□□ -0.34
Gm28240-201ENSMUST00000187560 UbtfP25976 765 aaKnown RBP12.9□□□□□ -0.34
Gm28240-201ENSMUST00000187560 Stk3Q9JI10 497 aa12.9□□□□□ -0.34
Gm28240-201ENSMUST00000187560 Stk25Q9Z2W1 426 aa12.89□□□□□ -0.35
Gm28240-201ENSMUST00000187560 Ttbk1Q6PCN3 1308 aa12.87□□□□□ -0.35
Gm28240-201ENSMUST00000187560 Gm13697A2AK42 830 aa12.84□□□□□ -0.35
Gm28240-201ENSMUST00000187560 Hnrnpul2Q00PI9 745 aaKnown RBP12.81□□□□□ -0.36
Gm28240-201ENSMUST00000187560 Chrm1P12657 460 aa12.79□□□□□ -0.36
Gm28240-201ENSMUST00000187560 Kdm2aP59997 1161 aa12.78□□□□□ -0.36
Gm28240-201ENSMUST00000187560 Ric3Q8BPM6 367 aa12.78□□□□□ -0.36
Gm28240-201ENSMUST00000187560 Slc7a3P70423 618 aa12.77□□□□□ -0.37
Gm28240-201ENSMUST00000187560 Zbtb7bQ64321 544 aa12.76□□□□□ -0.37
Gm28240-201ENSMUST00000187560 Arhgef1Q61210 920 aaKnown RBP12.76□□□□□ -0.37
Gm28240-201ENSMUST00000187560 Stk24Q99KH8 431 aa12.76□□□□□ -0.37
Gm28240-201ENSMUST00000187560 Zc3h15Q3TIV5 426 aaKnown RBP12.71□□□□□ -0.38
Gm28240-201ENSMUST00000187560 Ggt6Q6PDE7 497 aa12.69□□□□□ -0.38
Gm28240-201ENSMUST00000187560 Pdap1Q3UHX2 181 aaKnown RBP12.68□□□□□ -0.38
Gm28240-201ENSMUST00000187560 Npm1Q61937 292 aaKnown RBP12.68□□□□□ -0.38
Gm28240-201ENSMUST00000187560 Atad2Q8CDM1 1040 aa12.68□□□□□ -0.38
Gm28240-201ENSMUST00000187560 Os9Q8K2C7 672 aa12.66□□□□□ -0.38
Gm28240-201ENSMUST00000187560 Scaf1Q5U4C3 1256 aaKnown RBP12.65□□□□□ -0.38
Gm28240-201ENSMUST00000187560 Ak7Q9D2H2 614 aa12.65□□□□□ -0.39
Gm28240-201ENSMUST00000187560 Sgip1Q8VD37 806 aa12.64□□□□□ -0.39
Gm28240-201ENSMUST00000187560 Mier1Q5UAK0 511 aa12.63□□□□□ -0.39
Gm28240-201ENSMUST00000187560 Cadps2Q8BYR5 1297 aa12.61□□□□□ -0.39
Gm28240-201ENSMUST00000187560 Slc24a3Q99PD7 645 aa12.61□□□□□ -0.39
Gm28240-201ENSMUST00000187560 PygbQ8CI94 843 aaKnown RBP12.58□□□□□ -0.4
Gm28240-201ENSMUST00000187560 Dhx30Q99PU8 1217 aaKnown RBP12.57□□□□□ -0.4
Gm28240-201ENSMUST00000187560 Znf704Q9ERQ3 566 aa12.53□□□□□ -0.4
Gm28240-201ENSMUST00000187560 Apba2P98084 750 aa12.52□□□□□ -0.4
Gm28240-201ENSMUST00000187560 Nyap1Q6PFX7 833 aa12.52□□□□□ -0.41
Gm28240-201ENSMUST00000187560 TprnA2AI08 749 aaKnown RBP12.49□□□□□ -0.41
Gm28240-201ENSMUST00000187560 Cypt1Q8CH20 168 aa12.49□□□□□ -0.41
Gm28240-201ENSMUST00000187560 Gpr37l1Q99JG2 481 aa12.46□□□□□ -0.41
Gm28240-201ENSMUST00000187560 Pitpnm1O35954 1243 aa12.44□□□□□ -0.42
Gm28240-201ENSMUST00000187560 Slc4a5E9Q3M5 1116 aa12.44□□□□□ -0.42
Gm28240-201ENSMUST00000187560 1700006A11RikB9EHI3 544 aa12.38□□□□□ -0.43
Gm28240-201ENSMUST00000187560 Fam117aQ7TNF9 451 aa12.38□□□□□ -0.43
Gm28240-201ENSMUST00000187560 Pcdhb17Q91VD8 799 aa12.38□□□□□ -0.43
Gm28240-201ENSMUST00000187560 Bcl2l13P59017 434 aa12.38□□□□□ -0.43
Gm28240-201ENSMUST00000187560 Trim35Q8C006 501 aa12.37□□□□□ -0.43
Gm28240-201ENSMUST00000187560 CrebzfQ91ZR3 358 aa12.37□□□□□ -0.43
Gm28240-201ENSMUST00000187560 Rad21Q61550 635 aaKnown RBP12.34□□□□□ -0.43
Gm28240-201ENSMUST00000187560 Erich4Q3UNU4 136 aa12.33□□□□□ -0.44
Gm28240-201ENSMUST00000187560 E2f4Q8R0K9 410 aa12.28□□□□□ -0.44
Gm28240-201ENSMUST00000187560 Brpf1B2RRD7 1212 aa12.27□□□□□ -0.45
Gm28240-201ENSMUST00000187560 Ciz1Q8VEH2 845 aa12.27□□□□□ -0.45
Gm28240-201ENSMUST00000187560 PrimpolQ6P1E7 537 aa12.25□□□□□ -0.45
Gm28240-201ENSMUST00000187560 Ccdc96Q9CR92 584 aa12.23□□□□□ -0.45
Gm28240-201ENSMUST00000187560 Speer2E9Q9U2 264 aa12.19□□□□□ -0.46
Gm28240-201ENSMUST00000187560 SnphQ80U23 495 aa12.19□□□□□ -0.46
Gm28240-201ENSMUST00000187560 Nap1l5Q9JJF0 156 aa12.19□□□□□ -0.46
Gm28240-201ENSMUST00000187560 Rtl5Q5DTT4 599 aa12.18□□□□□ -0.46
Gm28240-201ENSMUST00000187560 Ddx11Q6AXC6 880 aa12.17□□□□□ -0.46
Gm28240-201ENSMUST00000187560 Pelp1Q9DBD5 1123 aaKnown RBP12.17□□□□□ -0.46
Gm28240-201ENSMUST00000187560 Irx6Q9ER75 438 aa12.17□□□□□ -0.46
Gm28240-201ENSMUST00000187560 Slain2Q8CI08 581 aa12.14□□□□□ -0.47
Gm28240-201ENSMUST00000187560 E9Q0B3 247 aa12.12□□□□□ -0.47
Gm28240-201ENSMUST00000187560 Pde8bE9Q4S1 865 aa12.11□□□□□ -0.47
Gm28240-201ENSMUST00000187560 Ndufv2Q9D6J6 248 aa12.11□□□□□ -0.47
Gm28240-201ENSMUST00000187560 Mllt3A2AM29 569 aa12.09□□□□□ -0.47
Gm28240-201ENSMUST00000187560 Rasgrp4Q8BTM9 673 aa12.09□□□□□ -0.47
Gm28240-201ENSMUST00000187560 Irf6P97431 467 aa12.07□□□□□ -0.48
Gm28240-201ENSMUST00000187560 IncenpQ9WU62 880 aa12.07□□□□□ -0.48
Gm28240-201ENSMUST00000187560 Znf579Q80VM4 562 aa12.06□□□□□ -0.48
Gm28240-201ENSMUST00000187560 GopcQ8BH60 463 aa12.06□□□□□ -0.48
Gm28240-201ENSMUST00000187560 Tulp1Q9Z273 543 aa12.06□□□□□ -0.48
Gm28240-201ENSMUST00000187560 Cacnb1Q8R3Z5 597 aa12.04□□□□□ -0.48
Gm28240-201ENSMUST00000187560 Mink1Q9JM52 1308 aa12.02□□□□□ -0.49
Gm28240-201ENSMUST00000187560 Bclaf1Q8K019 919 aaKnown RBP12.02□□□□□ -0.49
Gm28240-201ENSMUST00000187560 Znf330Q922H9 316 aa12.02□□□□□ -0.49
Gm28240-201ENSMUST00000187560 Sptlc1O35704 473 aa12.01□□□□□ -0.49
Gm28240-201ENSMUST00000187560 Pdzrn4E9PUZ9 1014 aa12□□□□□ -0.49
Gm28240-201ENSMUST00000187560 Tox2A2A472 547 aa11.98□□□□□ -0.49
Gm28240-201ENSMUST00000187560 Tor1aip2Q8BYU6 502 aa11.98□□□□□ -0.49
Gm28240-201ENSMUST00000187560 Bcl11bQ99PV8 884 aa11.98□□□□□ -0.49
Gm28240-201ENSMUST00000187560 OsbpQ3B7Z2 805 aa11.96□□□□□ -0.49
Gm28240-201ENSMUST00000187560 Kank3Q9Z1P7 791 aa11.96□□□□□ -0.49
Gm28240-201ENSMUST00000187560 NclP09405 707 aaKnown RBP11.95□□□□□ -0.5
Gm28240-201ENSMUST00000187560 Pcdhb20Q91XZ9 799 aa11.95□□□□□ -0.5
Gm28240-201ENSMUST00000187560 Pdia6Q922R8 440 aaKnown RBP11.92□□□□□ -0.5
Gm28240-201ENSMUST00000187560 Tpcn2Q8BWC0 731 aa11.9□□□□□ -0.51
Gm28240-201ENSMUST00000187560 DiexfQ8BTT6 772 aaKnown RBP11.88□□□□□ -0.51
Gm28240-201ENSMUST00000187560 Prim1P20664 417 aa11.87□□□□□ -0.51
Gm28240-201ENSMUST00000187560 Pcmtd1P59913 357 aa11.87□□□□□ -0.51
Gm28240-201ENSMUST00000187560 Dok7Q18PE0 504 aa11.87□□□□□ -0.51
Gm28240-201ENSMUST00000187560 Neurod2Q62414 383 aa11.87□□□□□ -0.51
Gm28240-201ENSMUST00000187560 Prom2Q3UUY6 835 aa11.86□□□□□ -0.51
Gm28240-201ENSMUST00000187560 Prr7Q3V0I2 269 aa11.82□□□□□ -0.52
Gm28240-201ENSMUST00000187560 Gimap6Q8K349 305 aa11.82□□□□□ -0.52
Gm28240-201ENSMUST00000187560 Pip4p2Q9CZX7 257 aa11.8□□□□□ -0.52
Gm28240-201ENSMUST00000187560 Kcnn1Q9EQR3 537 aa11.8□□□□□ -0.52
Gm28240-201ENSMUST00000187560 Evi5P97366 809 aa11.79□□□□□ -0.52
Gm28240-201ENSMUST00000187560 ZyxQ62523 564 aa11.79□□□□□ -0.52
Gm28240-201ENSMUST00000187560 XpcP51612 930 aa11.78□□□□□ -0.52
Gm28240-201ENSMUST00000187560 Kcnv2Q8CFS6 562 aa11.78□□□□□ -0.52
Gm28240-201ENSMUST00000187560 Gm13695A2AK44 830 aa11.77□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms