RNA–Protein interactions for RNA: ENSMUST00000020753.3

Clhc1-201, Transcript of Clathrin heavy chain linker domain-containing protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clhc1, Length 2,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1-201ENSMUST00000020753 Stk25Q9Z2W1 426 aa8.26□□□□□ -1.09
Clhc1-201ENSMUST00000020753 P3h3Q8CG70 732 aa8.24□□□□□ -1.09
Clhc1-201ENSMUST00000020753 ArxO35085 564 aa8.23□□□□□ -1.09
Clhc1-201ENSMUST00000020753 ChgaP26339 463 aaKnown RBP8.23□□□□□ -1.09
Clhc1-201ENSMUST00000020753 Zbtb7bQ64321 544 aa8.22□□□□□ -1.09
Clhc1-201ENSMUST00000020753 Gm13697A2AK42 830 aa8.21□□□□□ -1.09
Clhc1-201ENSMUST00000020753 VaspP70460 375 aaKnown RBP8.21□□□□□ -1.1
Clhc1-201ENSMUST00000020753 Rsph6aQ8CDR2 708 aa8.21□□□□□ -1.1
Clhc1-201ENSMUST00000020753 Atad2Q8CDM1 1040 aa8.2□□□□□ -1.1
Clhc1-201ENSMUST00000020753 PygbQ8CI94 843 aaKnown RBP8.19□□□□□ -1.1
Clhc1-201ENSMUST00000020753 Pitpnm1O35954 1243 aa8.19□□□□□ -1.1
Clhc1-201ENSMUST00000020753 Dnajc5P60904 198 aa8.19□□□□□ -1.1
Clhc1-201ENSMUST00000020753 Stk24Q99KH8 431 aa8.19□□□□□ -1.1
Clhc1-201ENSMUST00000020753 Trim35Q8C006 501 aa8.17□□□□□ -1.1
Clhc1-201ENSMUST00000020753 Slc7a3P70423 618 aa8.16□□□□□ -1.1
Clhc1-201ENSMUST00000020753 Cadps2Q8BYR5 1297 aa8.13□□□□□ -1.11
Clhc1-201ENSMUST00000020753 UbtfP25976 765 aaKnown RBP8.11□□□□□ -1.11
Clhc1-201ENSMUST00000020753 Slc24a3Q99PD7 645 aa8.11□□□□□ -1.11
Clhc1-201ENSMUST00000020753 Kcnn1Q9EQR3 537 aa8.11□□□□□ -1.11
Clhc1-201ENSMUST00000020753 Pdap1Q3UHX2 181 aaKnown RBP8.1□□□□□ -1.11
Clhc1-201ENSMUST00000020753 Mier1Q5UAK0 511 aa8.1□□□□□ -1.11
Clhc1-201ENSMUST00000020753 Ric3Q8BPM6 367 aa8.1□□□□□ -1.11
Clhc1-201ENSMUST00000020753 Prr29B1ARI9 187 aa8.09□□□□□ -1.11
Clhc1-201ENSMUST00000020753 Nyap1Q6PFX7 833 aa8.09□□□□□ -1.11
Clhc1-201ENSMUST00000020753 Arhgef1Q61210 920 aaKnown RBP8.09□□□□□ -1.12
Clhc1-201ENSMUST00000020753 CrebzfQ91ZR3 358 aa8.09□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Kdm2aP59997 1161 aa8.07□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Npm1Q61937 292 aaKnown RBP8.07□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Hnrnpul2Q00PI9 745 aaKnown RBP8.06□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Ak7Q9D2H2 614 aa8.06□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Znf703P0CL69 594 aa8.06□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Chrm1P12657 460 aa8.05□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Pcdhb17Q91VD8 799 aa8.05□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Sgip1Q8VD37 806 aa8.04□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Kank3Q9Z1P7 791 aa8.03□□□□□ -1.12
Clhc1-201ENSMUST00000020753 Ildr2B5TVM2 661 aa8.02□□□□□ -1.13
Clhc1-201ENSMUST00000020753 Zc3h15Q3TIV5 426 aaKnown RBP8.02□□□□□ -1.13
Clhc1-201ENSMUST00000020753 Ripply1Q2WG77 201 aa8.01□□□□□ -1.13
Clhc1-201ENSMUST00000020753 Gpr37l1Q99JG2 481 aa8.01□□□□□ -1.13
Clhc1-201ENSMUST00000020753 Pip4p2Q9CZX7 257 aa8.01□□□□□ -1.13
Clhc1-201ENSMUST00000020753 Ggt6Q6PDE7 497 aa8□□□□□ -1.13
Clhc1-201ENSMUST00000020753 Cnksr2Q80YA9 1032 aa7.99□□□□□ -1.13
Clhc1-201ENSMUST00000020753 Ttbk1Q6PCN3 1308 aa7.97□□□□□ -1.13
Clhc1-201ENSMUST00000020753 Ndufv2Q9D6J6 248 aa7.97□□□□□ -1.13
Clhc1-201ENSMUST00000020753 1700006A11RikB9EHI3 544 aa7.95□□□□□ -1.14
Clhc1-201ENSMUST00000020753 Scaf1Q5U4C3 1256 aaKnown RBP7.94□□□□□ -1.14
Clhc1-201ENSMUST00000020753 Apba2P98084 750 aa7.93□□□□□ -1.14
Clhc1-201ENSMUST00000020753 E9Q0B3 247 aa7.91□□□□□ -1.14
Clhc1-201ENSMUST00000020753 Dhx30Q99PU8 1217 aaKnown RBP7.9□□□□□ -1.14
Clhc1-201ENSMUST00000020753 Cacnb1Q8R3Z5 597 aa7.9□□□□□ -1.15
Clhc1-201ENSMUST00000020753 Clcn6O35454 870 aa7.89□□□□□ -1.15
Clhc1-201ENSMUST00000020753 Bcl2l13P59017 434 aa7.87□□□□□ -1.15
Clhc1-201ENSMUST00000020753 Fam117aQ7TNF9 451 aa7.86□□□□□ -1.15
Clhc1-201ENSMUST00000020753 SnphQ80U23 495 aa7.86□□□□□ -1.15
Clhc1-201ENSMUST00000020753 TprnA2AI08 749 aaKnown RBP7.85□□□□□ -1.15
Clhc1-201ENSMUST00000020753 Ddx11Q6AXC6 880 aa7.84□□□□□ -1.15
Clhc1-201ENSMUST00000020753 Erich4Q3UNU4 136 aa7.84□□□□□ -1.15
Clhc1-201ENSMUST00000020753 IncenpQ9WU62 880 aa7.84□□□□□ -1.15
Clhc1-201ENSMUST00000020753 Slain2Q8CI08 581 aa7.82□□□□□ -1.16
Clhc1-201ENSMUST00000020753 Ciz1Q8VEH2 845 aa7.82□□□□□ -1.16
Clhc1-201ENSMUST00000020753 Speer2E9Q9U2 264 aa7.81□□□□□ -1.16
Clhc1-201ENSMUST00000020753 Os9Q8K2C7 672 aa7.8□□□□□ -1.16
Clhc1-201ENSMUST00000020753 Pde8bE9Q4S1 865 aa7.79□□□□□ -1.16
Clhc1-201ENSMUST00000020753 Mllt3A2AM29 569 aa7.79□□□□□ -1.16
Clhc1-201ENSMUST00000020753 Tulp1Q9Z273 543 aa7.79□□□□□ -1.16
Clhc1-201ENSMUST00000020753 Bclaf1Q8K019 919 aaKnown RBP7.78□□□□□ -1.16
Clhc1-201ENSMUST00000020753 Dok7Q18PE0 504 aa7.78□□□□□ -1.16
Clhc1-201ENSMUST00000020753 Cypt1Q8CH20 168 aa7.78□□□□□ -1.16
Clhc1-201ENSMUST00000020753 E2f4Q8R0K9 410 aa7.77□□□□□ -1.17
Clhc1-201ENSMUST00000020753 Nap1l5Q9JJF0 156 aa7.76□□□□□ -1.17
Clhc1-201ENSMUST00000020753 Prim1P20664 417 aa7.76□□□□□ -1.17
Clhc1-201ENSMUST00000020753 Znf516Q7TSH3 1157 aa7.76□□□□□ -1.17
Clhc1-201ENSMUST00000020753 Pcdhb20Q91XZ9 799 aa7.76□□□□□ -1.17
Clhc1-201ENSMUST00000020753 Rtl5Q5DTT4 599 aa7.74□□□□□ -1.17
Clhc1-201ENSMUST00000020753 Pdzrn4E9PUZ9 1014 aa7.73□□□□□ -1.17
Clhc1-201ENSMUST00000020753 Znf579Q80VM4 562 aa7.73□□□□□ -1.17
Clhc1-201ENSMUST00000020753 Rad21Q61550 635 aaKnown RBP7.71□□□□□ -1.18
Clhc1-201ENSMUST00000020753 PrimpolQ6P1E7 537 aa7.69□□□□□ -1.18
Clhc1-201ENSMUST00000020753 Tox2A2A472 547 aa7.68□□□□□ -1.18
Clhc1-201ENSMUST00000020753 Brpf1B2RRD7 1212 aa7.66□□□□□ -1.18
Clhc1-201ENSMUST00000020753 Kank4Q6P9J5 1016 aa7.66□□□□□ -1.18
Clhc1-201ENSMUST00000020753 Bcl11bQ99PV8 884 aa7.66□□□□□ -1.18
Clhc1-201ENSMUST00000020753 Irf6P97431 467 aa7.65□□□□□ -1.18
Clhc1-201ENSMUST00000020753 OsbpQ3B7Z2 805 aa7.64□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Sptlc1O35704 473 aa7.64□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Tpcn2Q8BWC0 731 aa7.62□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Ccdc96Q9CR92 584 aa7.62□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Gm45233A0A0N4SVE0 221 aa7.62□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Fkbp4P30416 458 aa7.62□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Zranb1Q7M760 708 aa7.62□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Prr7Q3V0I2 269 aa7.61□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Tor1aip2Q8BYU6 502 aa7.6□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Lrrc14bQ3UJB3 510 aa7.59□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Rasgrp4Q8BTM9 673 aa7.59□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Mink1Q9JM52 1308 aa7.59□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Znf330Q922H9 316 aa7.59□□□□□ -1.19
Clhc1-201ENSMUST00000020753 Slc12a5Q91V14 1138 aa7.58□□□□□ -1.2
Clhc1-201ENSMUST00000020753 Irx6Q9ER75 438 aa7.58□□□□□ -1.2
Clhc1-201ENSMUST00000020753 Evi5P97366 809 aa7.57□□□□□ -1.2
Clhc1-201ENSMUST00000020753 Pdia6Q922R8 440 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms