RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 IGLV2-18A0A075B6J9 118 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 IGKV3D-20A0A0C4DH25 116 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 MUC21A0A0G2JKD1 596 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 MUC21A0A140T8X8 626 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 LYRM9A8MSI8 78 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 DEFB4AO15263 64 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 NPYP01303 97 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 SPART-AS1P0CW21 52 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 ASIPP42127 132 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 PCP4P48539 62 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 ODF1Q14990 250 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 OCIAD2Q56VL3 154 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 MUC21Q5SSG8 566 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 LYRM7Q5U5X0 104 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 AMMECR1LQ6DCA0 310 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 LINC00173Q6ZV60 143 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 C2orf91Q6ZV80 131 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 ZNF575Q86XF7 245 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 ZFAND2AQ8N6M9 145 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 Q8TAT8 98 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 TMEM141Q96I45 108 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 VCX2Q9H322 139 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 CST9LQ9H4G1 147 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 DNAH17Q9UFH2 4485 aa3.76□□□□□ -1.81
SHMT1-211ENST00000618902 TMSB15BA0A087X1C1 80 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 TRAV10A0A0B4J240 114 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 IGHV4-28A0A0C4DH34 117 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 KLLNB2CW77 178 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 F8VRH5 84 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 J3KRW8 73 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 K7EP34 96 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 VCYO14598 125 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 INSP01308 110 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 AZU1P20160 251 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 S100A4P26447 101 aaKnown RBP3.75□□□□□ -1.81
SHMT1-211ENST00000618902 ZNF80P51504 273 aaPredicted RBP3.75□□□□□ -1.81
SHMT1-211ENST00000618902 CRYBA4P53673 196 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 SUMO2P61956 95 aaKnown RBP3.75□□□□□ -1.81
SHMT1-211ENST00000618902 RBX1P62877 108 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 RRN3P1Q2M238 152 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 PIK3CD-AS1Q5SR53 167 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 UFSP1Q6NVU6 142 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 CFAP161Q6P656 301 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 PHLDA1Q8WV24 401 aaPredicted RBP3.75□□□□□ -1.81
SHMT1-211ENST00000618902 TOMM6Q96B49 74 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 CELA1Q9UNI1 258 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 PHLDA3Q9Y5J5 127 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
SHMT1-211ENST00000618902 DNAH11Q96DT5 4516 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 IGHV3OR16-12A0A075B7B8 117 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 TRAV12-3A0A0B4J271 114 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 A0A1W2PPM0 123 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 PLAC8L1A1L4L8 177 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 CBY3A6NI87 242 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 H0Y8G0 127 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 NXPH4O95158 308 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 HERVK_113P61574 105 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 COTL1Q14019 142 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 CEND1Q8N111 149 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 NRACQ8N912 160 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 LINC00467Q9BRT7 94 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 SMIM2Q9BVW6 85 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 C11orf21Q9P2W6 132 aa3.74□□□□□ -1.81
SHMT1-211ENST00000618902 MUC4Q99102 2169 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 TRBV25-1A0A075B6N4 114 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 TRBV6-5A0A0K0K1A5 114 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 A0A1B0GWB2 263 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 E9PLD3 99 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 NCR2O95944 276 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 P0DMU3 169 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 FAM231AP0DMU4 169 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 FAM231CP0DMU5 169 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 SCGB1A1P11684 91 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 RNASE4P34096 147 aaKnown RBP3.73□□□□□ -1.81
SHMT1-211ENST00000618902 NMUP48645 174 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 NANOS2P60321 138 aaKnown RBP3.73□□□□□ -1.81
SHMT1-211ENST00000618902 ZC2HC1BQ5TFG8 222 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 FAM159AQ6UWV7 190 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 NEGR1Q7Z3B1 354 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 C15orf53Q8NAA6 179 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 SYT8Q8NBV8 401 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 NEXN-AS1Q8NBZ9 246 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 TMEM263Q8WUH6 116 aaKnown RBP3.73□□□□□ -1.81
SHMT1-211ENST00000618902 LINC00476Q8WZB0 136 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 PTH2Q96A98 100 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 C16orf74Q96GX8 76 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 C18orf15Q96N68 181 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 SCGB3A1Q96QR1 104 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 TIMM17AQ99595 171 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 KIR2DL4Q99706 377 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 VPS25Q9BRG1 176 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 CYSLTR1Q9Y271 337 aa3.73□□□□□ -1.81
SHMT1-211ENST00000618902 CHTOPQ9Y3Y2 248 aaKnown RBP3.73□□□□□ -1.81
SHMT1-211ENST00000618902 TIMM8BQ9Y5J9 83 aaPredicted RBP3.73□□□□□ -1.81
SHMT1-211ENST00000618902 EPPK1P58107 5090 aaKnown RBP3.73□□□□□ -1.81
SHMT1-211ENST00000618902 TRBV20-1A0A075B6N2 111 aa3.72□□□□□ -1.81
SHMT1-211ENST00000618902 TRAV8-6A0A0B4J262 113 aa3.72□□□□□ -1.81
SHMT1-211ENST00000618902 MYMXA0A1B0GTQ4 84 aa3.72□□□□□ -1.81
SHMT1-211ENST00000618902 H3BNG1 76 aa3.72□□□□□ -1.81
SHMT1-211ENST00000618902 H3BUT2 72 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms