RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 IGHV3-33P01772 117 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 RNASE3P12724 160 aaKnown RBP1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 CBLN1P23435 193 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 C5orf38Q86SI9 138 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 COA5Q86WW8 74 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 SBSPONQ8IVN8 264 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 C10orf82Q8WW14 230 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 IFI27L1Q96BM0 104 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 VAMP8Q9BV40 100 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 DPY30Q9C005 99 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 PRO1933Q9H354 126 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 MRPL35Q9NZE8 188 aaKnown RBP1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 MRPL36Q9P0J6 103 aaKnown RBP1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 KLK9Q9UKQ9 250 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 MYO18AQ92614 2054 aaKnown RBP1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 TULP4Q9NRJ4 1543 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 ALPK2Q86TB3 2170 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 ERVK-7P63135 1459 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 PRXQ9BXM0 1461 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 NRAPQ86VF7 1730 aa1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 XRN1Q8IZH2 1706 aaKnown RBP1.18□□□□□ -2.22
SCAMP1-205ENST00000614488 EXPH5Q8NEV8 1989 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 DOCK2Q92608 1830 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 PCNTO95613 3336 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 CPSF1Q10570 1443 aaKnown RBP1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 ARHGAP5Q13017 1502 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 EHBP1L1Q8N3D4 1523 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 UBE2L5PA0A1B0GUS4 154 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 TRBV6-4A0A1B0GX49 114 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 TNRC18O15417 2968 aaPredicted RBP1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 UBE2L3P68036 154 aaKnown RBP1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 DCDP81605 110 aaKnown RBP1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 SPRNQ5BIV9 151 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 Q6ZRN7 208 aaPredicted RBP1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 DEFB132Q7Z7B7 95 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 WFDC10AQ9H1F0 79 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 LINC00474Q9P2X8 69 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 AP4S1Q9Y587 144 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 V9GYS6 101 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 RTTNQ86VV8 2226 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 PEAK1Q9H792 1746 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 FYCO1Q9BQS8 1478 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 PSME4Q14997 1843 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 WNK3Q9BYP7 1800 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 ARFGEF1Q9Y6D6 1849 aa1.17□□□□□ -2.22
SCAMP1-205ENST00000614488 PLCH1Q4KWH8 1693 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 TNRC6CQ9HCJ0 1690 aaKnown RBP1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 HFM1A2PYH4 1435 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 RRBP1Q9P2E9 1410 aaKnown RBP1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 TANC1Q9C0D5 1861 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 PDE4DIPQ5VU43 2346 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 TRPM2O94759 1503 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 LMTK2Q8IWU2 1503 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 PIK3C2BO00750 1634 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 PAPPAQ13219 1627 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 IGKV3-7A0A075B6H7 116 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 TRAV23DV6A0A075B6W5 121 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 TRAV12-3A0A0B4J271 114 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 PIGBOS1A0A0B4J2F0 54 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 NUPR2A6NF83 97 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 HCG22E2RYF7 251 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 GNGT2O14610 69 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 NUPR1O60356 82 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 IGLV3-1P01715 115 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 ODF3Q96PU9 254 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 ATG5Q9H1Y0 275 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 FAIMQ9NVQ4 179 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 SCP2D1Q9UJQ7 156 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 LINC00312Q9Y6C7 94 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 PARP14Q460N5 1801 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 TNRC6BQ9UPQ9 1833 aaKnown RBP1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 ADGRL2O95490 1459 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 ARHGEF5Q12774 1597 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 KIF1AQ12756 1690 aa1.16□□□□□ -2.22
SCAMP1-205ENST00000614488 DAPK1P53355 1430 aa1.15□□□□□ -2.22
SCAMP1-205ENST00000614488 TROQ12816 1431 aaPredicted RBP1.15□□□□□ -2.22
SCAMP1-205ENST00000614488 IQGAP3Q86VI3 1631 aa1.15□□□□□ -2.22
SCAMP1-205ENST00000614488 NRXN3Q9Y4C0 1643 aa1.15□□□□□ -2.22
SCAMP1-205ENST00000614488 KNDC1Q76NI1 1749 aa1.15□□□□□ -2.22
SCAMP1-205ENST00000614488 PARP4Q9UKK3 1724 aaKnown RBP1.15□□□□□ -2.22
SCAMP1-205ENST00000614488 TRAV13-2A0A0B4J235 113 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 A0A0J9YY99 117 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 TRBV10-1A0A0K0K1A3 114 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 TRBV10-3A0A0K0K1G6 114 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 hADV29S1A0JD25 119 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 JMJD7-PLA2G4BH0Y9G9 81 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 CCKP06307 115 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 LINC00032P0C843 101 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 ATP5EP56381 51 aaPredicted RBP1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 LINC00299Q6ZSB3 139 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 COMMD6Q7Z4G1 85 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 TSLPQ969D9 159 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 DMAC1Q96GE9 116 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 C22orf24Q9Y442 160 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 PXDNQ92626 1479 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 CDC42BPGQ6DT37 1551 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 COL14A1Q05707 1796 aaKnown RBP1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 LRRIQ1Q96JM4 1722 aa1.15□□□□□ -2.23
SCAMP1-205ENST00000614488 CRYBG1Q9Y4K1 1723 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms