RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 TWIST1Q15672 202 aa8.15□□□□□ -1.1
HLA-F-230ENST00000606273 ZNF56Q15929 161 aa8.15□□□□□ -1.1
HLA-F-230ENST00000606273 WDR73Q6P4I2 378 aa8.15□□□□□ -1.1
HLA-F-230ENST00000606273 NEGR1Q7Z3B1 354 aa8.15□□□□□ -1.1
HLA-F-230ENST00000606273 NUP35Q8NFH5 326 aa8.15□□□□□ -1.1
HLA-F-230ENST00000606273 AP1S3Q96PC3 154 aa8.15□□□□□ -1.1
HLA-F-230ENST00000606273 PRADC1Q9BSG0 188 aa8.15□□□□□ -1.1
HLA-F-230ENST00000606273 GFRA4Q9GZZ7 299 aa8.15□□□□□ -1.1
HLA-F-230ENST00000606273 FAM30AQ9NZY2 134 aa8.15□□□□□ -1.1
HLA-F-230ENST00000606273 SMIM27A0A1W2PRY6 76 aa8.14□□□□□ -1.11
HLA-F-230ENST00000606273 MGPP08493 103 aa8.14□□□□□ -1.11
HLA-F-230ENST00000606273 RAB4BP61018 213 aa8.14□□□□□ -1.11
HLA-F-230ENST00000606273 FAM231BA6NCW3 169 aa8.13□□□□□ -1.11
HLA-F-230ENST00000606273 F5H697 171 aa8.13□□□□□ -1.11
HLA-F-230ENST00000606273 F8W036 122 aa8.13□□□□□ -1.11
HLA-F-230ENST00000606273 SUMO4Q6EEV6 95 aa8.13□□□□□ -1.11
HLA-F-230ENST00000606273 NFE4Q86UQ8 179 aa8.13□□□□□ -1.11
HLA-F-230ENST00000606273 NEXN-AS1Q8NBZ9 246 aa8.13□□□□□ -1.11
HLA-F-230ENST00000606273 M0QY20 66 aa8.12□□□□□ -1.11
HLA-F-230ENST00000606273 SIVA1O15304 175 aa8.12□□□□□ -1.11
HLA-F-230ENST00000606273 TRGC1P0CF51 173 aa8.12□□□□□ -1.11
HLA-F-230ENST00000606273 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
HLA-F-230ENST00000606273 PNRC1Q12796 327 aaPredicted RBP8.12□□□□□ -1.11
HLA-F-230ENST00000606273 WFDC10BQ8IUB3 73 aa8.12□□□□□ -1.11
HLA-F-230ENST00000606273 ATP6V0E2Q8NHE4 81 aa8.12□□□□□ -1.11
HLA-F-230ENST00000606273 DPH3P1Q9H4G8 78 aa8.12□□□□□ -1.11
HLA-F-230ENST00000606273 NAT8BQ9UHF3 227 aa8.12□□□□□ -1.11
HLA-F-230ENST00000606273 LRP2P98164 4655 aa8.11□□□□□ -1.11
HLA-F-230ENST00000606273 TRAV26-2A0A0B4J265 109 aa8.11□□□□□ -1.11
HLA-F-230ENST00000606273 A0A1B0GUT8 65 aa8.11□□□□□ -1.11
HLA-F-230ENST00000606273 GAS8-AS1O95177 125 aa8.11□□□□□ -1.11
HLA-F-230ENST00000606273 C10orf91Q5T1B1 145 aa8.11□□□□□ -1.11
HLA-F-230ENST00000606273 SEC11CQ9BY50 192 aa8.11□□□□□ -1.11
HLA-F-230ENST00000606273 IGLV5-52A0A0A0MRZ9 124 aa8.1□□□□□ -1.11
HLA-F-230ENST00000606273 TRBV10-1A0A0K0K1A3 114 aa8.1□□□□□ -1.11
HLA-F-230ENST00000606273 UBE2D3P61077 147 aa8.1□□□□□ -1.11
HLA-F-230ENST00000606273 UBE2D2P62837 147 aa8.1□□□□□ -1.11
HLA-F-230ENST00000606273 GATD1Q8NB37 220 aa8.1□□□□□ -1.11
HLA-F-230ENST00000606273 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
HLA-F-230ENST00000606273 TRBV7-3A0A075B6L6 115 aa8.09□□□□□ -1.11
HLA-F-230ENST00000606273 IGHV3-38A0A0C4DH36 116 aa8.09□□□□□ -1.11
HLA-F-230ENST00000606273 GTSF1LQ9H1H1 148 aa8.09□□□□□ -1.11
HLA-F-230ENST00000606273 CARHSP1Q9Y2V2 147 aaKnown RBP8.09□□□□□ -1.11
HLA-F-230ENST00000606273 PPP1R2P9O14990 202 aa8.08□□□□□ -1.12
HLA-F-230ENST00000606273 MT-ND4LP03901 98 aa8.08□□□□□ -1.12
HLA-F-230ENST00000606273 TIRAPP58753 221 aa8.08□□□□□ -1.12
HLA-F-230ENST00000606273 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
HLA-F-230ENST00000606273 RPL36AP83881 106 aaKnown RBP8.08□□□□□ -1.12
HLA-F-230ENST00000606273 MRPL54Q6P161 138 aaKnown RBP8.08□□□□□ -1.12
HLA-F-230ENST00000606273 SH2D6Q7Z4S9 175 aa8.08□□□□□ -1.12
HLA-F-230ENST00000606273 AMN1Q8IY45 258 aa8.08□□□□□ -1.12
HLA-F-230ENST00000606273 RPL36ALQ969Q0 106 aaKnown RBP8.08□□□□□ -1.12
HLA-F-230ENST00000606273 BORCS7Q96B45 105 aa8.08□□□□□ -1.12
HLA-F-230ENST00000606273 RPL39LQ96EH5 51 aaKnown RBP8.08□□□□□ -1.12
HLA-F-230ENST00000606273 TMEM191AQ9H0A3 160 aa8.08□□□□□ -1.12
HLA-F-230ENST00000606273 A0A1B0GXF2 115 aa8.07□□□□□ -1.12
HLA-F-230ENST00000606273 RAB4AP20338 218 aa8.07□□□□□ -1.12
HLA-F-230ENST00000606273 CAMPP49913 170 aa8.07□□□□□ -1.12
HLA-F-230ENST00000606273 RIGQ13278 110 aa8.07□□□□□ -1.12
HLA-F-230ENST00000606273 LELP1Q5T871 98 aa8.07□□□□□ -1.12
HLA-F-230ENST00000606273 RASL11AQ6T310 242 aa8.07□□□□□ -1.12
HLA-F-230ENST00000606273 NTM-AS1Q6ZSK4 140 aa8.07□□□□□ -1.12
HLA-F-230ENST00000606273 SLC7A5P1Q8MH63 180 aa8.07□□□□□ -1.12
HLA-F-230ENST00000606273 SMKR1H3BMG3 65 aa8.06□□□□□ -1.12
HLA-F-230ENST00000606273 RPS10P46783 165 aaKnown RBP8.05□□□□□ -1.12
HLA-F-230ENST00000606273 OR10J3Q5JRS4 329 aa8.05□□□□□ -1.12
HLA-F-230ENST00000606273 SMIM15Q7Z3B0 74 aa8.05□□□□□ -1.12
HLA-F-230ENST00000606273 NIT2Q9NQR4 276 aa8.05□□□□□ -1.12
HLA-F-230ENST00000606273 TRAV9-2A0A087WT02 112 aa8.04□□□□□ -1.12
HLA-F-230ENST00000606273 C7orf77A4D0Y5 90 aa8.04□□□□□ -1.12
HLA-F-230ENST00000606273 LRCOL1A6NCL2 159 aa8.04□□□□□ -1.12
HLA-F-230ENST00000606273 H7C1H1 209 aa8.04□□□□□ -1.12
HLA-F-230ENST00000606273 NCR2O95944 276 aa8.04□□□□□ -1.12
HLA-F-230ENST00000606273 MRPL51Q4U2R6 128 aaKnown RBP8.04□□□□□ -1.12
HLA-F-230ENST00000606273 FAM104BQ5XKR9 115 aa8.04□□□□□ -1.12
HLA-F-230ENST00000606273 DNAJC30Q96LL9 226 aa8.04□□□□□ -1.12
HLA-F-230ENST00000606273 TRBV6-8A0A0A6YYG3 113 aa8.03□□□□□ -1.12
HLA-F-230ENST00000606273 IGHV3-30P01768 117 aa8.03□□□□□ -1.12
HLA-F-230ENST00000606273 IGHV3-33P01772 117 aa8.03□□□□□ -1.12
HLA-F-230ENST00000606273 APOC3P02656 99 aa8.03□□□□□ -1.12
HLA-F-230ENST00000606273 IGHV3-30-3P0DP02 117 aa8.03□□□□□ -1.12
HLA-F-230ENST00000606273 IGHV3-30-5P0DP03 117 aa8.03□□□□□ -1.12
HLA-F-230ENST00000606273 HBBP68871 147 aa8.03□□□□□ -1.12
HLA-F-230ENST00000606273 Q6ZSA8 131 aa8.03□□□□□ -1.12
HLA-F-230ENST00000606273 TRAV8-6A0A0B4J262 113 aa8.02□□□□□ -1.13
HLA-F-230ENST00000606273 LINC01556Q5JQF7 62 aa8.02□□□□□ -1.13
HLA-F-230ENST00000606273 DAZ4Q86SG3 579 aaKnown RBP8.02□□□□□ -1.13
HLA-F-230ENST00000606273 NIT1Q86X76 327 aa8.02□□□□□ -1.13
HLA-F-230ENST00000606273 NRACQ8N912 160 aa8.02□□□□□ -1.13
HLA-F-230ENST00000606273 CTDSP1Q9GZU7 261 aa8.02□□□□□ -1.13
HLA-F-230ENST00000606273 DAZ3Q9NR90 486 aaKnown RBP8.02□□□□□ -1.13
HLA-F-230ENST00000606273 A0A087WWC5 75 aa8.01□□□□□ -1.13
HLA-F-230ENST00000606273 A0A1B0GW15 77 aa8.01□□□□□ -1.13
HLA-F-230ENST00000606273 ATP5L2Q7Z4Y8 100 aa8.01□□□□□ -1.13
HLA-F-230ENST00000606273 IMMP2LQ96T52 175 aa8.01□□□□□ -1.13
HLA-F-230ENST00000606273 RPS10P5Q9NQ39 176 aa8.01□□□□□ -1.13
HLA-F-230ENST00000606273 URGCP-MRPS24S4R325 110 aa8.01□□□□□ -1.13
HLA-F-230ENST00000606273 PKHD1L1Q86WI1 4243 aa8.01□□□□□ -1.13
HLA-F-230ENST00000606273 TRBV6-5A0A0K0K1A5 114 aa8□□□□□ -1.13
HLA-F-230ENST00000606273 SDHAF1A6NFY7 115 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms