RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 SIRPDQ9H106 197 aa16.8■□□□□ 0.28
SIN3B-209ENST00000596802 PEMTQ9UBM1 199 aa16.8■□□□□ 0.28
SIN3B-209ENST00000596802 PTPRZ1P23471 2315 aaPredicted RBP16.79■□□□□ 0.28
SIN3B-209ENST00000596802 GAGE2AQ6NT46 116 aa16.79■□□□□ 0.28
SIN3B-209ENST00000596802 C5orf56Q8N8D9 126 aa16.79■□□□□ 0.28
SIN3B-209ENST00000596802 TMEM219Q86XT9 240 aa16.78■□□□□ 0.28
SIN3B-209ENST00000596802 TINCRA0A1B0GVN0 87 aa16.77■□□□□ 0.28
SIN3B-209ENST00000596802 C19orf54Q5BKX5 351 aa16.77■□□□□ 0.28
SIN3B-209ENST00000596802 EDA2RQ9HAV5 297 aa16.77■□□□□ 0.28
SIN3B-209ENST00000596802 SAA4P35542 130 aa16.77■□□□□ 0.27
SIN3B-209ENST00000596802 HIST1H4AP62805 103 aaKnown RBP16.77■□□□□ 0.27
SIN3B-209ENST00000596802 RPS28P62857 69 aaKnown RBP16.77■□□□□ 0.27
SIN3B-209ENST00000596802 C22orf24Q9Y442 160 aa16.77■□□□□ 0.27
SIN3B-209ENST00000596802 BEAN1Q3B7T3 259 aa16.76■□□□□ 0.27
SIN3B-209ENST00000596802 RHPN1-AS1Q9BWJ2 59 aa16.76■□□□□ 0.27
SIN3B-209ENST00000596802 ANKHD1Q8IWZ3 2542 aaKnown RBP16.76■□□□□ 0.27
SIN3B-209ENST00000596802 ASH1LQ9NR48 2969 aaKnown RBP16.75■□□□□ 0.27
SIN3B-209ENST00000596802 TIRAPP58753 221 aa16.74■□□□□ 0.27
SIN3B-209ENST00000596802 CYSTM1Q9H1C7 97 aa16.74■□□□□ 0.27
SIN3B-209ENST00000596802 hADV29S1A0JD25 119 aa16.74■□□□□ 0.27
SIN3B-209ENST00000596802 Q8N2B8 174 aa16.73■□□□□ 0.27
SIN3B-209ENST00000596802 BAALC-AS2P0C853 105 aa16.73■□□□□ 0.27
SIN3B-209ENST00000596802 TRAV12-2A0A075B6T6 113 aa16.72■□□□□ 0.27
SIN3B-209ENST00000596802 LINC00308Q8TCZ7 52 aa16.72■□□□□ 0.27
SIN3B-209ENST00000596802 ANKRD11Q6UB99 2663 aaPredicted RBP16.72■□□□□ 0.27
SIN3B-209ENST00000596802 ATOX1O00244 68 aa16.72■□□□□ 0.27
SIN3B-209ENST00000596802 IGHG2P01859 326 aa16.72■□□□□ 0.27
SIN3B-209ENST00000596802 NDUFA1O15239 70 aa16.71■□□□□ 0.27
SIN3B-209ENST00000596802 TRACP01848 142 aa16.71■□□□□ 0.27
SIN3B-209ENST00000596802 IGHV3-11P01762 117 aa16.71■□□□□ 0.26
SIN3B-209ENST00000596802 OR13C6PQ8NH95 151 aa16.71■□□□□ 0.26
SIN3B-209ENST00000596802 GRNP28799 593 aaKnown RBP16.7■□□□□ 0.26
SIN3B-209ENST00000596802 UBTD1Q9HAC8 227 aa16.7■□□□□ 0.26
SIN3B-209ENST00000596802 IGHV3OR16-10A0A075B7F0 116 aa16.69■□□□□ 0.26
SIN3B-209ENST00000596802 EDN2P20800 178 aa16.69■□□□□ 0.26
SIN3B-209ENST00000596802 IGF2-ASQ6U949 168 aa16.69■□□□□ 0.26
SIN3B-209ENST00000596802 Q8NA96 180 aa16.69■□□□□ 0.26
SIN3B-209ENST00000596802 ACACAQ13085 2346 aa16.69■□□□□ 0.26
SIN3B-209ENST00000596802 WIPF1O43516 503 aa16.68■□□□□ 0.26
SIN3B-209ENST00000596802 CDKN2A-AS1Q9UH64 79 aa16.68■□□□□ 0.26
SIN3B-209ENST00000596802 ZFHX3Q15911 3703 aa16.68■□□□□ 0.26
SIN3B-209ENST00000596802 PIEZO1Q92508 2521 aa16.67■□□□□ 0.26
SIN3B-209ENST00000596802 IGHV1OR15-1A0A075B7D0 117 aa16.67■□□□□ 0.26
SIN3B-209ENST00000596802 IGKV3-20P01619 116 aa16.67■□□□□ 0.26
SIN3B-209ENST00000596802 CIRBPQ14011 172 aaKnown RBP16.67■□□□□ 0.26
SIN3B-209ENST00000596802 FAM222AQ5U5X8 452 aa16.67■□□□□ 0.26
SIN3B-209ENST00000596802 FAM218AQ96MZ4 157 aa16.67■□□□□ 0.26
SIN3B-209ENST00000596802 UBE2D4Q9Y2X8 147 aa16.67■□□□□ 0.26
SIN3B-209ENST00000596802 INAFM2P0DMQ5 153 aa16.66■□□□□ 0.26
SIN3B-209ENST00000596802 SOSTDC1Q6X4U4 206 aa16.66■□□□□ 0.26
SIN3B-209ENST00000596802 PROK1P58294 105 aa16.65■□□□□ 0.26
SIN3B-209ENST00000596802 HRNRQ86YZ3 2850 aaPredicted RBP16.65■□□□□ 0.26
SIN3B-209ENST00000596802 IGHV3-73A0A0B4J1V6 119 aa16.65■□□□□ 0.26
SIN3B-209ENST00000596802 A0A0U1RRA0 63 aa16.65■□□□□ 0.26
SIN3B-209ENST00000596802 KIR2DL5BQ8NHK3 375 aa16.65■□□□□ 0.26
SIN3B-209ENST00000596802 CHCHD7Q9BUK0 85 aa16.65■□□□□ 0.26
SIN3B-209ENST00000596802 MOB4Q9Y3A3 225 aa16.65■□□□□ 0.26
SIN3B-209ENST00000596802 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.64■□□□□ 0.25
SIN3B-209ENST00000596802 NACAE9PAV3 2078 aa16.64■□□□□ 0.25
SIN3B-209ENST00000596802 RPL18AQ02543 176 aaKnown RBP16.64■□□□□ 0.25
SIN3B-209ENST00000596802 Q9H8V8 135 aa16.63■□□□□ 0.25
SIN3B-209ENST00000596802 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.63■□□□□ 0.25
SIN3B-209ENST00000596802 IGKV2-29A2NJV5 120 aaPredicted RBP16.63■□□□□ 0.25
SIN3B-209ENST00000596802 C11orf71Q6IPW1 123 aa16.63■□□□□ 0.25
SIN3B-209ENST00000596802 DPH3Q96FX2 82 aa16.63■□□□□ 0.25
SIN3B-209ENST00000596802 ZNF625Q96I27 306 aaPredicted RBP16.63■□□□□ 0.25
SIN3B-209ENST00000596802 Q9UF83 564 aa16.62■□□□□ 0.25
SIN3B-209ENST00000596802 SPTBN1Q01082 2364 aaKnown RBP16.62■□□□□ 0.25
SIN3B-209ENST00000596802 TRAV25A0A0B4J276 109 aa16.62■□□□□ 0.25
SIN3B-209ENST00000596802 TRAV13-1A0A0B4J241 112 aa16.61■□□□□ 0.25
SIN3B-209ENST00000596802 TMEM258P61165 79 aa16.61■□□□□ 0.25
SIN3B-209ENST00000596802 SPINK13Q1W4C9 94 aa16.61■□□□□ 0.25
SIN3B-209ENST00000596802 IGLV5-45A0A087WSX0 123 aa16.61■□□□□ 0.25
SIN3B-209ENST00000596802 USMG5Q96IX5 58 aa16.6■□□□□ 0.25
SIN3B-209ENST00000596802 OXTP01178 125 aa16.6■□□□□ 0.25
SIN3B-209ENST00000596802 LINC00467Q9BRT7 94 aa16.59■□□□□ 0.25
SIN3B-209ENST00000596802 UPK3BQ9BT76 320 aa16.59■□□□□ 0.25
SIN3B-209ENST00000596802 Q9HAA7 133 aa16.59■□□□□ 0.25
SIN3B-209ENST00000596802 RS1O15537 224 aa16.59■□□□□ 0.25
SIN3B-209ENST00000596802 KLRB1Q12918 225 aa16.59■□□□□ 0.25
SIN3B-209ENST00000596802 AKAP13Q12802 2813 aa16.59■□□□□ 0.25
SIN3B-209ENST00000596802 MALP21145 153 aa16.58■□□□□ 0.25
SIN3B-209ENST00000596802 IGLV5-39A0A0G2JS06 123 aa16.57■□□□□ 0.24
SIN3B-209ENST00000596802 COX6A2Q02221 97 aa16.57■□□□□ 0.24
SIN3B-209ENST00000596802 SERP2Q8N6R1 65 aa16.57■□□□□ 0.24
SIN3B-209ENST00000596802 PF4V1P10720 104 aa16.56■□□□□ 0.24
SIN3B-209ENST00000596802 PRIMA1Q86XR5 153 aa16.56■□□□□ 0.24
SIN3B-209ENST00000596802 SPTBN4Q9H254 2564 aa16.56■□□□□ 0.24
SIN3B-209ENST00000596802 DSCR8Q96T75 97 aa16.55■□□□□ 0.24
SIN3B-209ENST00000596802 IGKV3D-7A0A0C4DH55 119 aa16.55■□□□□ 0.24
SIN3B-209ENST00000596802 COPS9Q8WXC6 57 aa16.55■□□□□ 0.24
SIN3B-209ENST00000596802 DOPEY2Q9Y3R5 2298 aa16.54■□□□□ 0.24
SIN3B-209ENST00000596802 DNAL4O96015 105 aa16.53■□□□□ 0.24
SIN3B-209ENST00000596802 HOXD3P31249 432 aaPredicted RBP16.53■□□□□ 0.24
SIN3B-209ENST00000596802 H3BUA1 57 aa16.53■□□□□ 0.24
SIN3B-209ENST00000596802 C9orf129Q5T035 196 aaKnown RBP16.53■□□□□ 0.24
SIN3B-209ENST00000596802 Q6ZSN1 163 aa16.53■□□□□ 0.24
SIN3B-209ENST00000596802 A0A087WVE0 104 aa16.52■□□□□ 0.24
SIN3B-209ENST00000596802 KNCNA6PVL3 124 aa16.52■□□□□ 0.24
SIN3B-209ENST00000596802 Q6JHZ5 121 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms