RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 CLEC2BQ92478 149 aa13.17□□□□□ -0.3
SPC24-206ENST00000592540 TRGV11A0A075B6L2 103 aa13.17□□□□□ -0.3
SPC24-206ENST00000592540 IGHV4-61A0A0C4DH41 118 aa13.17□□□□□ -0.3
SPC24-206ENST00000592540 A8MZ25 164 aa13.17□□□□□ -0.3
SPC24-206ENST00000592540 EDA2RQ9HAV5 297 aa13.17□□□□□ -0.3
SPC24-206ENST00000592540 PROK1P58294 105 aa13.16□□□□□ -0.3
SPC24-206ENST00000592540 TMEM95Q3KNT9 176 aa13.16□□□□□ -0.3
SPC24-206ENST00000592540 TINCRA0A1B0GVN0 87 aa13.16□□□□□ -0.3
SPC24-206ENST00000592540 LST1O00453 97 aa13.16□□□□□ -0.3
SPC24-206ENST00000592540 TMEM61Q8N0U2 210 aa13.16□□□□□ -0.3
SPC24-206ENST00000592540 NACAE9PAV3 2078 aa13.15□□□□□ -0.3
SPC24-206ENST00000592540 MRPL23Q16540 153 aaKnown RBP13.14□□□□□ -0.31
SPC24-206ENST00000592540 PSMB8P28062 276 aa13.14□□□□□ -0.31
SPC24-206ENST00000592540 TNFRSF18Q9Y5U5 241 aa13.14□□□□□ -0.31
SPC24-206ENST00000592540 DEFB121Q5J5C9 76 aa13.13□□□□□ -0.31
SPC24-206ENST00000592540 YAE1D1Q9NRH1 226 aa13.13□□□□□ -0.31
SPC24-206ENST00000592540 DUX3Q96PT4 197 aa13.13□□□□□ -0.31
SPC24-206ENST00000592540 IGF2RP11717 2491 aa13.13□□□□□ -0.31
SPC24-206ENST00000592540 FAM240AA0A1B0GVK7 77 aa13.12□□□□□ -0.31
SPC24-206ENST00000592540 RBMY1A1P0DJD3 496 aaKnown RBP13.12□□□□□ -0.31
SPC24-206ENST00000592540 RBMY1CP0DJD4 496 aa13.12□□□□□ -0.31
SPC24-206ENST00000592540 RBMY1FQ15415 496 aaKnown RBP13.12□□□□□ -0.31
SPC24-206ENST00000592540 RNF152Q8N8N0 203 aa13.12□□□□□ -0.31
SPC24-206ENST00000592540 UBE2D4Q9Y2X8 147 aa13.12□□□□□ -0.31
SPC24-206ENST00000592540 COL12A1Q99715 3063 aa13.12□□□□□ -0.31
SPC24-206ENST00000592540 PIMREGQ9BSJ6 248 aa13.12□□□□□ -0.31
SPC24-206ENST00000592540 CHCHD7Q9BUK0 85 aa13.12□□□□□ -0.31
SPC24-206ENST00000592540 Q9UF83 564 aa13.12□□□□□ -0.31
SPC24-206ENST00000592540 HTN1P15515 57 aa13.11□□□□□ -0.31
SPC24-206ENST00000592540 C10orf99Q6UWK7 81 aa13.11□□□□□ -0.31
SPC24-206ENST00000592540 SPANXA1Q9NS26 97 aa13.11□□□□□ -0.31
SPC24-206ENST00000592540 TIMM17BO60830 172 aa13.11□□□□□ -0.31
SPC24-206ENST00000592540 C19orf84I3L1E1 186 aa13.1□□□□□ -0.31
SPC24-206ENST00000592540 DAND5Q8N907 189 aa13.1□□□□□ -0.31
SPC24-206ENST00000592540 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.09□□□□□ -0.31
SPC24-206ENST00000592540 IGKV2-29A2NJV5 120 aaPredicted RBP13.09□□□□□ -0.31
SPC24-206ENST00000592540 KNCNA6PVL3 124 aa13.09□□□□□ -0.31
SPC24-206ENST00000592540 UCNP55089 124 aa13.09□□□□□ -0.31
SPC24-206ENST00000592540 SYNJ2BPP57105 145 aa13.08□□□□□ -0.31
SPC24-206ENST00000592540 Q6ZSN1 163 aa13.08□□□□□ -0.31
SPC24-206ENST00000592540 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.08□□□□□ -0.329e-10■■■■□ 20.6
SPC24-206ENST00000592540 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
SPC24-206ENST00000592540 CITED2Q99967 270 aaPredicted RBP13.07□□□□□ -0.32
SPC24-206ENST00000592540 LINC00467Q9BRT7 94 aa13.07□□□□□ -0.32
SPC24-206ENST00000592540 CDKN2A-AS1Q9UH64 79 aa13.07□□□□□ -0.32
SPC24-206ENST00000592540 NDUFA1O15239 70 aa13.06□□□□□ -0.32
SPC24-206ENST00000592540 CRYBG3Q68DQ2 2970 aa13.06□□□□□ -0.32
SPC24-206ENST00000592540 PRM2P04554 102 aa13.06□□□□□ -0.32
SPC24-206ENST00000592540 DUX5Q96PT3 197 aa13.06□□□□□ -0.32
SPC24-206ENST00000592540 TRBV7-7A0A0K0K1E9 115 aa13.05□□□□□ -0.32
SPC24-206ENST00000592540 TMEM101Q96IK0 257 aa13.05□□□□□ -0.32
SPC24-206ENST00000592540 AVPP01185 164 aa13.04□□□□□ -0.32
SPC24-206ENST00000592540 MSMBP08118 114 aa13.04□□□□□ -0.32
SPC24-206ENST00000592540 IGLV5-45A0A087WSX0 123 aa13.03□□□□□ -0.32
SPC24-206ENST00000592540 IGHV3-38A0A0C4DH36 116 aa13.03□□□□□ -0.32
SPC24-206ENST00000592540 TIRAPP58753 221 aa13.03□□□□□ -0.32
SPC24-206ENST00000592540 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.03□□□□□ -0.32
SPC24-206ENST00000592540 TMEM89A2RUT3 159 aa13.02□□□□□ -0.32
SPC24-206ENST00000592540 CIRBPQ14011 172 aaKnown RBP13.02□□□□□ -0.32
SPC24-206ENST00000592540 MEIG1Q5JSS6 88 aa13.02□□□□□ -0.32
SPC24-206ENST00000592540 LINC00308Q8TCZ7 52 aa13.02□□□□□ -0.32
SPC24-206ENST00000592540 CHCHD5Q9BSY4 110 aa13.02□□□□□ -0.32
SPC24-206ENST00000592540 CSPG4Q6UVK1 2322 aa13.02□□□□□ -0.32
SPC24-206ENST00000592540 IGHV4-30-2A0A087WSY4 118 aa13.02□□□□□ -0.33
SPC24-206ENST00000592540 IGHV4-59P01825 116 aa13.02□□□□□ -0.33
SPC24-206ENST00000592540 PIK3CD-AS1Q5SR53 167 aa13.01□□□□□ -0.33
SPC24-206ENST00000592540 MAP1AP78559 2803 aaPredicted RBP13.01□□□□□ -0.33
SPC24-206ENST00000592540 ZNF415Q09FC8 603 aa13.01□□□□□ -0.33
SPC24-206ENST00000592540 COX6A2Q02221 97 aa13□□□□□ -0.33
SPC24-206ENST00000592540 RBMY1BA6NDE4 496 aaKnown RBP13□□□□□ -0.33
SPC24-206ENST00000592540 RBMY1EA6NEQ0 496 aaKnown RBP13□□□□□ -0.33
SPC24-206ENST00000592540 COX7A2LO14548 114 aa13□□□□□ -0.33
SPC24-206ENST00000592540 RBMY1DP0C7P1 496 aaKnown RBP13□□□□□ -0.33
SPC24-206ENST00000592540 HOXD3P31249 432 aaPredicted RBP13□□□□□ -0.33
SPC24-206ENST00000592540 DEFB131AP59861 70 aa13□□□□□ -0.33
SPC24-206ENST00000592540 SMIM20Q8N5G0 67 aa13□□□□□ -0.33
SPC24-206ENST00000592540 DNAJC30Q96LL9 226 aa13□□□□□ -0.33
SPC24-206ENST00000592540 CCL19Q99731 98 aa13□□□□□ -0.33
SPC24-206ENST00000592540 Q9H8V8 135 aa13□□□□□ -0.33
SPC24-206ENST00000592540 IGHV3-53P01767 116 aa12.99□□□□□ -0.33
SPC24-206ENST00000592540 ACYP1P07311 99 aa12.99□□□□□ -0.33
SPC24-206ENST00000592540 A8MTW9 85 aa12.99□□□□□ -0.33
SPC24-206ENST00000592540 FAM110AQ9BQ89 295 aa12.99□□□□□ -0.33
SPC24-206ENST00000592540 IGLV5-39A0A0G2JS06 123 aa12.98□□□□□ -0.33
SPC24-206ENST00000592540 DEFB112Q30KQ8 113 aa12.97□□□□□ -0.33
SPC24-206ENST00000592540 DGAT2L7PQ6IED9 249 aa12.97□□□□□ -0.33
SPC24-206ENST00000592540 ZNF625Q96I27 306 aaPredicted RBP12.97□□□□□ -0.33
SPC24-206ENST00000592540 IGHV3OR16-12A0A075B7B8 117 aa12.97□□□□□ -0.33
SPC24-206ENST00000592540 A0A0U1RRA0 63 aa12.97□□□□□ -0.33
SPC24-206ENST00000592540 ATP5J2P56134 94 aa12.96□□□□□ -0.33
SPC24-206ENST00000592540 LY6DQ14210 128 aa12.96□□□□□ -0.33
SPC24-206ENST00000592540 SHISA2Q6UWI4 295 aa12.96□□□□□ -0.33
SPC24-206ENST00000592540 HERVK_113P63121 156 aa12.96□□□□□ -0.34
SPC24-206ENST00000592540 SOSTDC1Q6X4U4 206 aa12.96□□□□□ -0.34
SPC24-206ENST00000592540 Q8N2B8 174 aa12.96□□□□□ -0.34
SPC24-206ENST00000592540 IMUPQ9GZP8 106 aa12.96□□□□□ -0.34
SPC24-206ENST00000592540 LINC00242Q5T6M2 205 aa12.95□□□□□ -0.34
SPC24-206ENST00000592540 PRORYQ9H606 182 aa12.95□□□□□ -0.34
SPC24-206ENST00000592540 C11orf72Q8NBR9 251 aa12.95□□□□□ -0.34
SPC24-206ENST00000592540 CREBBPQ92793 2442 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms