RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 IGHV1-58A0A0C4DH39 117 aa11.53□□□□□ -0.56
COMMD4-215ENST00000566843 A6NDX4 124 aa11.53□□□□□ -0.56
COMMD4-215ENST00000566843 ADAMTSL4-AS1Q5T5F5 129 aa11.53□□□□□ -0.56
COMMD4-215ENST00000566843 MIAQ16674 131 aa11.53□□□□□ -0.56
COMMD4-215ENST00000566843 SPANXA1Q9NS26 97 aa11.53□□□□□ -0.56
COMMD4-215ENST00000566843 FAM240AA0A1B0GVK7 77 aa11.52□□□□□ -0.56
COMMD4-215ENST00000566843 ADARB2-AS1A8MUL3 147 aa11.52□□□□□ -0.56
COMMD4-215ENST00000566843 UBTD1Q9HAC8 227 aa11.52□□□□□ -0.56
COMMD4-215ENST00000566843 COX6CP09669 75 aa11.52□□□□□ -0.57
COMMD4-215ENST00000566843 CD28P10747 220 aa11.52□□□□□ -0.57
COMMD4-215ENST00000566843 CFHR3Q02985 330 aa11.52□□□□□ -0.57
COMMD4-215ENST00000566843 BRD3OSQ6XYD6 125 aa11.52□□□□□ -0.57
COMMD4-215ENST00000566843 RNF152Q8N8N0 203 aa11.52□□□□□ -0.57
COMMD4-215ENST00000566843 TRAV12-2A0A075B6T6 113 aa11.51□□□□□ -0.57
COMMD4-215ENST00000566843 LST1O00453 97 aa11.51□□□□□ -0.57
COMMD4-215ENST00000566843 NDUFA12Q9UI09 145 aa11.51□□□□□ -0.57
COMMD4-215ENST00000566843 TRAV8-3A0A0A6YYJ7 113 aa11.51□□□□□ -0.57
COMMD4-215ENST00000566843 PRSS2P07478 247 aa11.51□□□□□ -0.57
COMMD4-215ENST00000566843 LY6EQ16553 131 aa11.51□□□□□ -0.57
COMMD4-215ENST00000566843 CHD6Q8TD26 2715 aa11.5□□□□□ -0.57
COMMD4-215ENST00000566843 KMT2BQ9UMN6 2715 aaPredicted RBP11.5□□□□□ -0.57
COMMD4-215ENST00000566843 VSIG2Q96IQ7 327 aa11.5□□□□□ -0.57
COMMD4-215ENST00000566843 DOPEY1Q5JWR5 2465 aa11.5□□□□□ -0.57
COMMD4-215ENST00000566843 TINCRA0A1B0GVN0 87 aa11.49□□□□□ -0.57
COMMD4-215ENST00000566843 TIMM17BO60830 172 aa11.49□□□□□ -0.57
COMMD4-215ENST00000566843 TMEM61Q8N0U2 210 aa11.49□□□□□ -0.57
COMMD4-215ENST00000566843 YAE1D1Q9NRH1 226 aa11.49□□□□□ -0.57
COMMD4-215ENST00000566843 PRRC2AP48634 2157 aaKnown RBP11.49□□□□□ -0.57
COMMD4-215ENST00000566843 BLCAPP62952 87 aa11.49□□□□□ -0.57
COMMD4-215ENST00000566843 TRGV11A0A075B6L2 103 aa11.48□□□□□ -0.57
COMMD4-215ENST00000566843 K7EQG2 157 aa11.48□□□□□ -0.57
COMMD4-215ENST00000566843 H3BUX3 64 aa11.48□□□□□ -0.57
COMMD4-215ENST00000566843 CLEC2BQ92478 149 aa11.48□□□□□ -0.57
COMMD4-215ENST00000566843 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
COMMD4-215ENST00000566843 SNRPD3P62318 126 aaKnown RBP11.47□□□□□ -0.57
COMMD4-215ENST00000566843 SPINK13Q1W4C9 94 aa11.47□□□□□ -0.57
COMMD4-215ENST00000566843 FAM208BQ5VWN6 2430 aa11.46□□□□□ -0.57
COMMD4-215ENST00000566843 TRBV7-7A0A0K0K1E9 115 aa11.46□□□□□ -0.57
COMMD4-215ENST00000566843 IGHV4-38-2P0DP08 117 aa11.46□□□□□ -0.57
COMMD4-215ENST00000566843 Q6ZSV7 163 aa11.46□□□□□ -0.57
COMMD4-215ENST00000566843 UBR5O95071 2799 aaPredicted RBP11.46□□□□□ -0.58
COMMD4-215ENST00000566843 CEMP1Q6PRD7 247 aaPredicted RBP11.46□□□□□ -0.58
COMMD4-215ENST00000566843 UTP20O75691 2785 aaKnown RBP11.45□□□□□ -0.58
COMMD4-215ENST00000566843 ABCA2Q9BZC7 2435 aa11.44□□□□□ -0.58
COMMD4-215ENST00000566843 DUX3Q96PT4 197 aa11.44□□□□□ -0.58
COMMD4-215ENST00000566843 CHCHD7Q9BUK0 85 aa11.44□□□□□ -0.58
COMMD4-215ENST00000566843 UBE2D4Q9Y2X8 147 aa11.44□□□□□ -0.58
COMMD4-215ENST00000566843 AKAP6Q13023 2319 aa11.44□□□□□ -0.58
COMMD4-215ENST00000566843 A8MZ25 164 aa11.43□□□□□ -0.58
COMMD4-215ENST00000566843 PSMB8P28062 276 aa11.43□□□□□ -0.58
COMMD4-215ENST00000566843 RNASE13Q5GAN3 156 aaKnown RBP11.43□□□□□ -0.58
COMMD4-215ENST00000566843 LRRK2Q5S007 2527 aa11.43□□□□□ -0.58
COMMD4-215ENST00000566843 PROK1P58294 105 aa11.42□□□□□ -0.58
COMMD4-215ENST00000566843 NPC2P61916 151 aa11.42□□□□□ -0.58
COMMD4-215ENST00000566843 IGLV5-45A0A087WSX0 123 aa11.41□□□□□ -0.58
COMMD4-215ENST00000566843 NDUFA1O15239 70 aa11.41□□□□□ -0.58
COMMD4-215ENST00000566843 RBMY1A1P0DJD3 496 aaKnown RBP11.41□□□□□ -0.58
COMMD4-215ENST00000566843 RBMY1CP0DJD4 496 aa11.41□□□□□ -0.58
COMMD4-215ENST00000566843 RBMY1FQ15415 496 aaKnown RBP11.41□□□□□ -0.58
COMMD4-215ENST00000566843 CITED2Q99967 270 aaPredicted RBP11.41□□□□□ -0.58
COMMD4-215ENST00000566843 ACYP1P07311 99 aa11.4□□□□□ -0.58
COMMD4-215ENST00000566843 TIRAPP58753 221 aa11.4□□□□□ -0.58
COMMD4-215ENST00000566843 PIK3CD-AS1Q5SR53 167 aa11.4□□□□□ -0.58
COMMD4-215ENST00000566843 IGHV3-73A0A0B4J1V6 119 aa11.4□□□□□ -0.58
COMMD4-215ENST00000566843 IGHV4-61A0A0C4DH41 118 aa11.4□□□□□ -0.58
COMMD4-215ENST00000566843 MEIG1Q5JSS6 88 aa11.39□□□□□ -0.59
COMMD4-215ENST00000566843 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
COMMD4-215ENST00000566843 CRYBG3Q68DQ2 2970 aa11.39□□□□□ -0.59
COMMD4-215ENST00000566843 TMEM89A2RUT3 159 aa11.39□□□□□ -0.59
COMMD4-215ENST00000566843 PLA2G2AP14555 144 aa11.38□□□□□ -0.59
COMMD4-215ENST00000566843 TMEM101Q96IK0 257 aa11.38□□□□□ -0.59
COMMD4-215ENST00000566843 Q6ZSN1 163 aa11.38□□□□□ -0.59
COMMD4-215ENST00000566843 LINC00467Q9BRT7 94 aa11.38□□□□□ -0.59
COMMD4-215ENST00000566843 Q9UF83 564 aa11.38□□□□□ -0.59
COMMD4-215ENST00000566843 VPREB3Q9UKI3 123 aa11.38□□□□□ -0.59
COMMD4-215ENST00000566843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-215ENST00000566843 IGKV2-29A2NJV5 120 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-215ENST00000566843 A8MTW9 85 aa11.37□□□□□ -0.59
COMMD4-215ENST00000566843 PIMREGQ9BSJ6 248 aa11.37□□□□□ -0.59
COMMD4-215ENST00000566843 CHCHD5Q9BSY4 110 aa11.37□□□□□ -0.59
COMMD4-215ENST00000566843 CDKN2A-AS1Q9UH64 79 aa11.37□□□□□ -0.59
COMMD4-215ENST00000566843 COX7A2LO14548 114 aa11.37□□□□□ -0.59
COMMD4-215ENST00000566843 LINC00308Q8TCZ7 52 aa11.37□□□□□ -0.59
COMMD4-215ENST00000566843 DNAJC30Q96LL9 226 aa11.37□□□□□ -0.59
COMMD4-215ENST00000566843 SVEP1Q4LDE5 3571 aa11.36□□□□□ -0.59
COMMD4-215ENST00000566843 DOPEY2Q9Y3R5 2298 aa11.36□□□□□ -0.59
COMMD4-215ENST00000566843 NACAE9PAV3 2078 aa11.36□□□□□ -0.59
COMMD4-215ENST00000566843 CIRBPQ14011 172 aaKnown RBP11.36□□□□□ -0.59
COMMD4-215ENST00000566843 DAND5Q8N907 189 aa11.36□□□□□ -0.59
COMMD4-215ENST00000566843 LINC01587Q99440 93 aa11.36□□□□□ -0.59
COMMD4-215ENST00000566843 IGLV5-39A0A0G2JS06 123 aa11.35□□□□□ -0.59
COMMD4-215ENST00000566843 NRGNQ92686 78 aa11.35□□□□□ -0.59
COMMD4-215ENST00000566843 C5orf47Q569G3 176 aa11.35□□□□□ -0.59
COMMD4-215ENST00000566843 C10orf105Q8TEF2 133 aa11.35□□□□□ -0.59
COMMD4-215ENST00000566843 TMEM126AQ9H061 195 aa11.35□□□□□ -0.59
COMMD4-215ENST00000566843 CSMD2Q7Z408 3487 aa11.35□□□□□ -0.59
COMMD4-215ENST00000566843 KNCNA6PVL3 124 aa11.34□□□□□ -0.59
COMMD4-215ENST00000566843 J3QKU1 62 aa11.34□□□□□ -0.59
COMMD4-215ENST00000566843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-215ENST00000566843 C10orf99Q6UWK7 81 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms