RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 TWIST1Q15672 202 aa8.3□□□□□ -1.08
RNF40-208ENST00000565995 RMI2Q96E14 147 aa8.3□□□□□ -1.08
RNF40-208ENST00000565995 TNXBP22105 4242 aa8.29□□□□□ -1.08
RNF40-208ENST00000565995 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
RNF40-208ENST00000565995 RIGQ13278 110 aa8.29□□□□□ -1.08
RNF40-208ENST00000565995 PIK3CD-AS1Q5SR53 167 aa8.29□□□□□ -1.08
RNF40-208ENST00000565995 ZFP2Q6ZN57 461 aa8.29□□□□□ -1.08
RNF40-208ENST00000565995 BTF3L4Q96K17 158 aa8.29□□□□□ -1.08
RNF40-208ENST00000565995 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
RNF40-208ENST00000565995 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
RNF40-208ENST00000565995 TRAV9-1A0A075B6T8 112 aa8.28□□□□□ -1.08
RNF40-208ENST00000565995 NTF3P20783 257 aa8.28□□□□□ -1.08
RNF40-208ENST00000565995 CAMPP49913 170 aa8.28□□□□□ -1.08
RNF40-208ENST00000565995 HNRNPA3P51991 378 aaKnown RBP8.28□□□□□ -1.08
RNF40-208ENST00000565995 FOXA3P55318 350 aaPredicted RBP8.28□□□□□ -1.08
RNF40-208ENST00000565995 RAB4BP61018 213 aa8.28□□□□□ -1.08
RNF40-208ENST00000565995 LRP2P98164 4655 aa8.28□□□□□ -1.08
RNF40-208ENST00000565995 SMIM15Q7Z3B0 74 aa8.28□□□□□ -1.08
RNF40-208ENST00000565995 IGHV3-73A0A0B4J1V6 119 aa8.27□□□□□ -1.09
RNF40-208ENST00000565995 S100A8P05109 93 aa8.27□□□□□ -1.09
RNF40-208ENST00000565995 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
RNF40-208ENST00000565995 SMIM17P0DL12 118 aa8.27□□□□□ -1.09
RNF40-208ENST00000565995 RPL37AP61513 92 aaKnown RBP8.27□□□□□ -1.09
RNF40-208ENST00000565995 HBBP68871 147 aa8.27□□□□□ -1.09
RNF40-208ENST00000565995 FAM74A4Q5TZK3 123 aa8.27□□□□□ -1.09
RNF40-208ENST00000565995 DMRTA1Q5VZB9 504 aa8.27□□□□□ -1.09
RNF40-208ENST00000565995 ATP5L2Q7Z4Y8 100 aa8.27□□□□□ -1.09
RNF40-208ENST00000565995 TGIF2-C20orf24A0A0A6YYL0 155 aa8.26□□□□□ -1.09
RNF40-208ENST00000565995 A0A1B0GW15 77 aa8.26□□□□□ -1.09
RNF40-208ENST00000565995 MGPP08493 103 aa8.26□□□□□ -1.09
RNF40-208ENST00000565995 ELOBQ15370 118 aa8.26□□□□□ -1.09
RNF40-208ENST00000565995 UFSP1Q6NVU6 142 aa8.26□□□□□ -1.09
RNF40-208ENST00000565995 NIT1Q86X76 327 aa8.26□□□□□ -1.09
RNF40-208ENST00000565995 DNAJC30Q96LL9 226 aa8.26□□□□□ -1.09
RNF40-208ENST00000565995 CNFNQ9BYD5 112 aa8.26□□□□□ -1.09
RNF40-208ENST00000565995 RNF213Q63HN8 5207 aa8.26□□□□□ -1.09
RNF40-208ENST00000565995 A0A087WWL8 130 aa8.25□□□□□ -1.09
RNF40-208ENST00000565995 A8MWV9 139 aa8.25□□□□□ -1.09
RNF40-208ENST00000565995 WDR73Q6P4I2 378 aa8.25□□□□□ -1.09
RNF40-208ENST00000565995 C14orf178Q8N769 122 aaPredicted RBP8.25□□□□□ -1.09
RNF40-208ENST00000565995 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.25□□□□□ -1.09
RNF40-208ENST00000565995 CHCHD7Q9BUK0 85 aa8.25□□□□□ -1.09
RNF40-208ENST00000565995 Q9UF83 564 aa8.25□□□□□ -1.09
RNF40-208ENST00000565995 IGKV2D-24A0A075B6R9 120 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 GAGE12JA6NER3 117 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 F5H697 171 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 GAGE1Q13065 139 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 GAGE4Q13068 117 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 GAGE5Q13069 117 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 ZNF56Q15929 161 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 GAGE13Q4V321 117 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 C14orf177Q52M58 125 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 Q6ZRU5 148 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 DPH3P1Q9H4G8 78 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 JPT2Q9H910 190 aa8.24□□□□□ -1.09
RNF40-208ENST00000565995 TRBV24-1A0A075B6N3 115 aa8.23□□□□□ -1.09
RNF40-208ENST00000565995 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
RNF40-208ENST00000565995 RHODO00212 210 aa8.23□□□□□ -1.09
RNF40-208ENST00000565995 Q0VG73 95 aa8.23□□□□□ -1.09
RNF40-208ENST00000565995 RASL11AQ6T310 242 aa8.23□□□□□ -1.09
RNF40-208ENST00000565995 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
RNF40-208ENST00000565995 KLK12Q9UKR0 248 aa8.23□□□□□ -1.09
RNF40-208ENST00000565995 COX19Q49B96 90 aa8.22□□□□□ -1.09
RNF40-208ENST00000565995 TMEM191AQ9H0A3 160 aa8.22□□□□□ -1.09
RNF40-208ENST00000565995 HLA-DQA1P01909 254 aa8.21□□□□□ -1.1
RNF40-208ENST00000565995 DGAT2L7PQ6IED9 249 aa8.21□□□□□ -1.1
RNF40-208ENST00000565995 AMN1Q8IY45 258 aa8.21□□□□□ -1.1
RNF40-208ENST00000565995 MT-ND6P03923 174 aa8.2□□□□□ -1.1
RNF40-208ENST00000565995 RPS10P46783 165 aaKnown RBP8.2□□□□□ -1.1
RNF40-208ENST00000565995 C9orf163Q8N9P6 203 aa8.2□□□□□ -1.1
RNF40-208ENST00000565995 UBE2WQ96B02 151 aa8.2□□□□□ -1.1
RNF40-208ENST00000565995 YPEL4Q96NS1 127 aa8.2□□□□□ -1.1
RNF40-208ENST00000565995 APCSP02743 223 aa8.19□□□□□ -1.1
RNF40-208ENST00000565995 RAB5AP20339 215 aa8.19□□□□□ -1.1
RNF40-208ENST00000565995 ENHOQ6UWT2 76 aa8.19□□□□□ -1.1
RNF40-208ENST00000565995 TMEM136Q6ZRR5 245 aa8.19□□□□□ -1.1
RNF40-208ENST00000565995 GNB1LQ9BYB4 327 aa8.19□□□□□ -1.1
RNF40-208ENST00000565995 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
RNF40-208ENST00000565995 TRAPPC1Q9Y5R8 145 aa8.19□□□□□ -1.1
RNF40-208ENST00000565995 A0A087WX48 190 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 TRAV26-2A0A0B4J265 109 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 COLCA2A8K830 154 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 H7C1H1 209 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 NCR2O95944 276 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 FABP9Q0Z7S8 132 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 CIRBPQ14011 172 aaKnown RBP8.18□□□□□ -1.1
RNF40-208ENST00000565995 FAM104BQ5XKR9 115 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 SUMO4Q6EEV6 95 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 GATD1Q8NB37 220 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 KIF25-AS1Q9Y6Z4 181 aa8.18□□□□□ -1.1
RNF40-208ENST00000565995 PRSS1P07477 247 aa8.17□□□□□ -1.1
RNF40-208ENST00000565995 RAB4AP20338 218 aa8.17□□□□□ -1.1
RNF40-208ENST00000565995 CKS2P33552 79 aa8.17□□□□□ -1.1
RNF40-208ENST00000565995 MRPL51Q4U2R6 128 aaKnown RBP8.17□□□□□ -1.1
RNF40-208ENST00000565995 SDIM1Q6ZPB5 146 aa8.17□□□□□ -1.1
RNF40-208ENST00000565995 MRAP2Q96G30 205 aa8.17□□□□□ -1.1
RNF40-208ENST00000565995 C1orf43Q9BWL3 253 aa8.17□□□□□ -1.1
RNF40-208ENST00000565995 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.17□□□□□ -1.1
RNF40-208ENST00000565995 TRBV10-1A0A0K0K1A3 114 aa8.16□□□□□ -1.1
RNF40-208ENST00000565995 D6R8Y8 96 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms