RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ADGRL2O95490 1459 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 ERVK-7P63135 1459 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 ROCK2O75116 1388 aaKnown RBP0.62□□□□□ -2.31
LINC00557-201ENST00000563184 SPTBN5Q9NRC6 3674 aaKnown RBP0.62□□□□□ -2.31
LINC00557-201ENST00000563184 RANBP2P49792 3224 aaKnown RBP0.62□□□□□ -2.31
LINC00557-201ENST00000563184 RBAKDNA6NC62 111 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 PITX3O75364 302 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 IGKCP01834 107 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 SSBP1Q04837 148 aaKnown RBP0.62□□□□□ -2.31
LINC00557-201ENST00000563184 ZNF56Q15929 161 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 SPINK13Q1W4C9 94 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 SLC48A1Q6P1K1 146 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 Q86TA4 180 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 C8orf59Q8N0T1 100 aaPredicted RBP0.62□□□□□ -2.31
LINC00557-201ENST00000563184 TSKUQ8WUA8 353 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 TCEAL7Q9BRU2 100 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 SEC11CQ9BY50 192 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 PRO3102Q9H379 93 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 SCN3BQ9NY72 215 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 LAMC1P11047 1609 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 BIVM-ERCC5R4GMW8 1640 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 USP9XQ93008 2570 aaPredicted RBP0.62□□□□□ -2.31
LINC00557-201ENST00000563184 EFCAB6Q5THR3 1501 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 EHBP1L1Q8N3D4 1523 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 ZNF292O60281 2723 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 CASKIN1Q8WXD9 1431 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 USP54Q70EL1 1684 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 NCOR1O75376 2440 aa0.62□□□□□ -2.31
LINC00557-201ENST00000563184 MBD5Q9P267 1494 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 KNTC1P50748 2209 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 ASH1LQ9NR48 2969 aaKnown RBP0.61□□□□□ -2.31
LINC00557-201ENST00000563184 CCNB3Q8WWL7 1395 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 BPTFQ12830 3046 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 FASNP49327 2511 aaKnown RBP0.61□□□□□ -2.31
LINC00557-201ENST00000563184 ARHGAP5Q13017 1502 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 LMTK2Q8IWU2 1503 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 TULP4Q9NRJ4 1543 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 SETXQ7Z333 2677 aaKnown RBP0.61□□□□□ -2.31
LINC00557-201ENST00000563184 TCRBV3S1A0A5B6 114 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 F6UZH7 168 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 PRH1P02810 166 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 GNG4P50150 75 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 CCL8P80075 99 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 KLKP1Q107X0 134 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 IQCJQ1A5X6 159 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 FAM74A4Q5TZK3 123 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 Q6AWC8 147 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 ZNF818PQ6ZRF7 136 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 IFI27L1Q96BM0 104 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 CCL19Q99731 98 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 CROCC2H7BZ55 1655 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 KDM5AP29375 1690 aaKnown RBP0.61□□□□□ -2.31
LINC00557-201ENST00000563184 IQGAP1P46940 1657 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 EEA1Q15075 1411 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 CEP162Q5TB80 1403 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 PHLPP1O60346 1717 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 MUC3AQ02505 3323 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 PXDNQ92626 1479 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 NRXN1Q9ULB1 1477 aa0.61□□□□□ -2.31
LINC00557-201ENST00000563184 VCANP13611 3396 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 TMEM131LA2VDJ0 1609 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 ABCA6Q8N139 1617 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 KIDINS220Q9ULH0 1771 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 WDR87Q6ZQQ6 2873 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 ACACBO00763 2458 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 HELZP42694 1942 aaKnown RBP0.6□□□□□ -2.31
LINC00557-201ENST00000563184 NAV2Q8IVL1 2488 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 COL6A3P12111 3177 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 TRPM2O94759 1503 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 ZC3H13Q5T200 1668 aaKnown RBP0.6□□□□□ -2.31
LINC00557-201ENST00000563184 CNOT1A5YKK6 2376 aaKnown RBP0.6□□□□□ -2.31
LINC00557-201ENST00000563184 TPRP12270 2363 aaKnown RBP0.6□□□□□ -2.31
LINC00557-201ENST00000563184 CENPFP49454 3210 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 VIRMAQ69YN4 1812 aaKnown RBP0.6□□□□□ -2.31
LINC00557-201ENST00000563184 TRAV12-3A0A0B4J271 114 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 LOC101927531A0A1B0GV80 90 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 C20orf202A1L168 122 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 LINC00587B1AMM8 73 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 TPPP2P59282 170 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 UBE2G1P62253 170 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 FXYD3Q14802 87 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 CYP2G1PQ6ZSU1 146 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 C5orf56Q8N8D9 126 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 MYOM3Q5VTT5 1437 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 ANKARQ7Z5J8 1434 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 SPTA1P02549 2419 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 ADGRB1O14514 1584 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 MAST1Q9Y2H9 1570 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 PTPRZ1P23471 2315 aaPredicted RBP0.6□□□□□ -2.31
LINC00557-201ENST00000563184 ITPR1Q14643 2758 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 ATP7BP35670 1465 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 CCDC141Q6ZP82 1450 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 PREX2Q70Z35 1606 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 CICQ96RK0 1608 aaPredicted RBP0.6□□□□□ -2.31
LINC00557-201ENST00000563184 PTPN23Q9H3S7 1636 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 MYH1P12882 1939 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 GCN1Q92616 2671 aaKnown RBP0.6□□□□□ -2.31
LINC00557-201ENST00000563184 REV3LO60673 3130 aa0.6□□□□□ -2.31
LINC00557-201ENST00000563184 FAM208BQ5VWN6 2430 aa0.59□□□□□ -2.31
LINC00557-201ENST00000563184 KTN1Q86UP2 1357 aaKnown RBP0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms