RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 CITED1Q99966 193 aa10.47□□□□□ -0.73
SPG7-203ENST00000561702 PF4P02776 101 aa10.46□□□□□ -0.73
SPG7-203ENST00000561702 NAA38Q9BRA0 125 aaKnown RBP10.46□□□□□ -0.73
SPG7-203ENST00000561702 IGLL5B9A064 214 aa10.46□□□□□ -0.74
SPG7-203ENST00000561702 RBMY1A1P0DJD3 496 aaKnown RBP10.46□□□□□ -0.74
SPG7-203ENST00000561702 RBMY1CP0DJD4 496 aa10.46□□□□□ -0.74
SPG7-203ENST00000561702 RBMY1FQ15415 496 aaKnown RBP10.46□□□□□ -0.74
SPG7-203ENST00000561702 SPXQ9BT56 116 aa10.46□□□□□ -0.74
SPG7-203ENST00000561702 PYGO1Q9Y3Y4 419 aa10.46□□□□□ -0.74
SPG7-203ENST00000561702 K7ERJ3 54 aa10.45□□□□□ -0.74
SPG7-203ENST00000561702 RHODO00212 210 aa10.45□□□□□ -0.74
SPG7-203ENST00000561702 IGLV1-51P01701 117 aa10.45□□□□□ -0.74
SPG7-203ENST00000561702 ZNF479Q96JC4 524 aa10.45□□□□□ -0.74
SPG7-203ENST00000561702 ODF3L2Q3SX64 289 aa10.45□□□□□ -0.74
SPG7-203ENST00000561702 TMEM170BQ5T4T1 132 aa10.45□□□□□ -0.74
SPG7-203ENST00000561702 SPANXB1Q9NS25 103 aaPredicted RBP10.45□□□□□ -0.74
SPG7-203ENST00000561702 INSP01308 110 aa10.44□□□□□ -0.74
SPG7-203ENST00000561702 P0DMU3 169 aa10.44□□□□□ -0.74
SPG7-203ENST00000561702 FAM231AP0DMU4 169 aa10.44□□□□□ -0.74
SPG7-203ENST00000561702 FAM231CP0DMU5 169 aa10.44□□□□□ -0.74
SPG7-203ENST00000561702 SRSF9Q13242 221 aaKnown RBP eCLIP10.44□□□□□ -0.74
SPG7-203ENST00000561702 KRTAP24-1Q3LI83 254 aa10.43□□□□□ -0.74
SPG7-203ENST00000561702 DNAJC30Q96LL9 226 aa10.43□□□□□ -0.74
SPG7-203ENST00000561702 TNFRSF18Q9Y5U5 241 aa10.43□□□□□ -0.74
SPG7-203ENST00000561702 JMJD1CQ15652 2540 aa10.43□□□□□ -0.74
SPG7-203ENST00000561702 RBMY1BA6NDE4 496 aaKnown RBP10.43□□□□□ -0.74
SPG7-203ENST00000561702 RBMY1EA6NEQ0 496 aaKnown RBP10.43□□□□□ -0.74
SPG7-203ENST00000561702 RBMY1DP0C7P1 496 aaKnown RBP10.43□□□□□ -0.74
SPG7-203ENST00000561702 RRN3P1Q2M238 152 aa10.43□□□□□ -0.74
SPG7-203ENST00000561702 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
SPG7-203ENST00000561702 SPATA3Q8NHX4 192 aa10.43□□□□□ -0.74
SPG7-203ENST00000561702 VCX2Q9H322 139 aa10.43□□□□□ -0.74
SPG7-203ENST00000561702 HTN1P15515 57 aa10.42□□□□□ -0.74
SPG7-203ENST00000561702 A0A0J9YY99 117 aa10.41□□□□□ -0.74
SPG7-203ENST00000561702 F8W1H4 67 aa10.41□□□□□ -0.74
SPG7-203ENST00000561702 LGALS3P17931 250 aaKnown RBP10.41□□□□□ -0.74
SPG7-203ENST00000561702 RNF151Q2KHN1 245 aa10.41□□□□□ -0.74
SPG7-203ENST00000561702 LINC01587Q99440 93 aa10.41□□□□□ -0.74
SPG7-203ENST00000561702 J3QQQ9 107 aa10.41□□□□□ -0.74
SPG7-203ENST00000561702 LEPROTO15243 131 aa10.41□□□□□ -0.74
SPG7-203ENST00000561702 EMP1P54849 157 aa10.41□□□□□ -0.74
SPG7-203ENST00000561702 BEAN1Q3B7T3 259 aa10.41□□□□□ -0.74
SPG7-203ENST00000561702 VPS25Q9BRG1 176 aa10.41□□□□□ -0.74
SPG7-203ENST00000561702 IGLV4-3A0A075B6K6 122 aa10.4□□□□□ -0.74
SPG7-203ENST00000561702 TMEM223A0PJW6 202 aa10.4□□□□□ -0.74
SPG7-203ENST00000561702 UBE2D1P51668 147 aa10.4□□□□□ -0.74
SPG7-203ENST00000561702 CMC4P56277 68 aaPredicted RBP10.4□□□□□ -0.74
SPG7-203ENST00000561702 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
SPG7-203ENST00000561702 PLEKHB2Q96CS7 222 aa10.4□□□□□ -0.74
SPG7-203ENST00000561702 TEP1Q99973 2627 aaKnown RBP10.4□□□□□ -0.74
SPG7-203ENST00000561702 CFAP126Q5VTH2 177 aa10.4□□□□□ -0.75
SPG7-203ENST00000561702 PRIMA1Q86XR5 153 aa10.4□□□□□ -0.75
SPG7-203ENST00000561702 C11orf72Q8NBR9 251 aa10.4□□□□□ -0.75
SPG7-203ENST00000561702 IGHV3-53P01767 116 aa10.39□□□□□ -0.75
SPG7-203ENST00000561702 LYRM7Q5U5X0 104 aa10.39□□□□□ -0.75
SPG7-203ENST00000561702 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
SPG7-203ENST00000561702 AMELXQ99217 191 aa10.39□□□□□ -0.75
SPG7-203ENST00000561702 SPANXA1Q9NS26 97 aa10.39□□□□□ -0.75
SPG7-203ENST00000561702 G3V4G9 280 aa10.38□□□□□ -0.75
SPG7-203ENST00000561702 STHQ8IWL8 128 aa10.38□□□□□ -0.75
SPG7-203ENST00000561702 NIPBLQ6KC79 2804 aaeCLIP10.37□□□□□ -0.75
SPG7-203ENST00000561702 RS1O15537 224 aa10.37□□□□□ -0.75
SPG7-203ENST00000561702 ZNF22P17026 224 aaPredicted RBP10.37□□□□□ -0.75
SPG7-203ENST00000561702 C19orf73Q9NVV2 129 aa10.37□□□□□ -0.75
SPG7-203ENST00000561702 IGHV3-73A0A0B4J1V6 119 aa10.36□□□□□ -0.75
SPG7-203ENST00000561702 PCP4P48539 62 aa10.36□□□□□ -0.75
SPG7-203ENST00000561702 MRPS36P82909 103 aaKnown RBP10.36□□□□□ -0.75
SPG7-203ENST00000561702 OPRPNQ99935 248 aaPredicted RBP10.36□□□□□ -0.75
SPG7-203ENST00000561702 MRPL16Q9NX20 251 aaKnown RBP10.36□□□□□ -0.75
SPG7-203ENST00000561702 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
SPG7-203ENST00000561702 FAM110AQ9BQ89 295 aa10.36□□□□□ -0.75
SPG7-203ENST00000561702 WFDC10AQ9H1F0 79 aa10.36□□□□□ -0.75
SPG7-203ENST00000561702 PGPEP1Q9NXJ5 209 aa10.36□□□□□ -0.75
SPG7-203ENST00000561702 ATRQ13535 2644 aa10.35□□□□□ -0.75
SPG7-203ENST00000561702 IGHV3-30P01768 117 aa10.35□□□□□ -0.75
SPG7-203ENST00000561702 IGHV3-30-5P0DP03 117 aa10.35□□□□□ -0.75
SPG7-203ENST00000561702 C9orf66Q5T8R8 295 aa10.35□□□□□ -0.75
SPG7-203ENST00000561702 TENM1Q9UKZ4 2725 aa10.35□□□□□ -0.75
SPG7-203ENST00000561702 NACAE9PAV3 2078 aa10.35□□□□□ -0.75
SPG7-203ENST00000561702 INSL3P51460 131 aa10.34□□□□□ -0.75
SPG7-203ENST00000561702 A0A0J9YXV3 536 aa10.34□□□□□ -0.75
SPG7-203ENST00000561702 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
SPG7-203ENST00000561702 COTL1Q14019 142 aa10.34□□□□□ -0.75
SPG7-203ENST00000561702 TINCRA0A1B0GVN0 87 aa10.33□□□□□ -0.76
SPG7-203ENST00000561702 J3QR89 54 aa10.33□□□□□ -0.76
SPG7-203ENST00000561702 GAGE13Q4V321 117 aa10.33□□□□□ -0.76
SPG7-203ENST00000561702 CHCHD7Q9BUK0 85 aa10.33□□□□□ -0.76
SPG7-203ENST00000561702 UBE2D4Q9Y2X8 147 aa10.33□□□□□ -0.76
SPG7-203ENST00000561702 H3BMG7 143 aa10.33□□□□□ -0.76
SPG7-203ENST00000561702 IL17DQ8TAD2 202 aa10.33□□□□□ -0.76
SPG7-203ENST00000561702 TIMM21Q9BVV7 248 aa10.33□□□□□ -0.76
SPG7-203ENST00000561702 RPL24P83731 157 aaKnown RBP10.32□□□□□ -0.76
SPG7-203ENST00000561702 Q6ZSN1 163 aa10.32□□□□□ -0.76
SPG7-203ENST00000561702 WFDC9Q8NEX5 89 aa10.32□□□□□ -0.76
SPG7-203ENST00000561702 XCL2Q9UBD3 114 aa10.32□□□□□ -0.76
SPG7-203ENST00000561702 TRBV20-1A0A075B6N2 111 aa10.31□□□□□ -0.76
SPG7-203ENST00000561702 TRBV10-1A0A0K0K1A3 114 aa10.31□□□□□ -0.76
SPG7-203ENST00000561702 APOMO95445 188 aa10.31□□□□□ -0.76
SPG7-203ENST00000561702 TSPAN13O95857 204 aa10.31□□□□□ -0.76
SPG7-203ENST00000561702 PRM2P04554 102 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms