RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 FA2HQ7L5A8 372 aa7.24□□□□□ -1.25
SHMT2-215ENST00000554656 NRACQ8N912 160 aa7.24□□□□□ -1.25
SHMT2-215ENST00000554656 PRSS3P2Q8NHM4 247 aa7.24□□□□□ -1.25
SHMT2-215ENST00000554656 C18orf15Q96N68 181 aa7.24□□□□□ -1.25
SHMT2-215ENST00000554656 TRGV1A0A0A0MS02 117 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 TRBV6-5A0A0K0K1A5 114 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 SMKR1H3BMG3 65 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 H7C1H1 209 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 RS1O15537 224 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 NUPR1O60356 82 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 NCR2O95944 276 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 MGPP08493 103 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 FABP4P15090 132 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 FUSP35637 526 aaKnown RBP eCLIP7.23□□□□□ -1.25
SHMT2-215ENST00000554656 AKR1D1P51857 326 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 SAMD10Q9BYL1 202 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 AP5S1Q9NUS5 200 aa7.23□□□□□ -1.25
SHMT2-215ENST00000554656 TRGV2A0A075B6R0 118 aa7.22□□□□□ -1.25
SHMT2-215ENST00000554656 AMTP48728 403 aa7.22□□□□□ -1.25
SHMT2-215ENST00000554656 PDZD11Q5EBL8 140 aa7.22□□□□□ -1.25
SHMT2-215ENST00000554656 UFSP1Q6NVU6 142 aa7.22□□□□□ -1.25
SHMT2-215ENST00000554656 RNASEKQ6P5S7 137 aaKnown RBP7.22□□□□□ -1.25
SHMT2-215ENST00000554656 Q8N8P6 123 aa7.22□□□□□ -1.25
SHMT2-215ENST00000554656 JPT2Q9H910 190 aa7.22□□□□□ -1.25
SHMT2-215ENST00000554656 A0A087WWL8 130 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 TRAV4A0A0B4J268 109 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 IGHV3-53P01767 116 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 SMIM6P0DI80 62 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 IFI27P40305 119 aaPredicted RBP7.21□□□□□ -1.26
SHMT2-215ENST00000554656 SUMO2P61956 95 aaKnown RBP7.21□□□□□ -1.26
SHMT2-215ENST00000554656 ZNF56Q15929 161 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 CFAP126Q5VTH2 177 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 SUMO4Q6EEV6 95 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 OR10D4PQ8NGN7 298 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 SMIM2Q9BVW6 85 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 MRPL16Q9NX20 251 aaKnown RBP7.21□□□□□ -1.26
SHMT2-215ENST00000554656 TNFRSF18Q9Y5U5 241 aa7.21□□□□□ -1.26
SHMT2-215ENST00000554656 TRAV26-2A0A0B4J265 109 aa7.2□□□□□ -1.26
SHMT2-215ENST00000554656 F5H697 171 aa7.2□□□□□ -1.26
SHMT2-215ENST00000554656 M0QY20 66 aa7.2□□□□□ -1.26
SHMT2-215ENST00000554656 TCAPO15273 167 aa7.2□□□□□ -1.26
SHMT2-215ENST00000554656 SIVA1O15304 175 aa7.2□□□□□ -1.26
SHMT2-215ENST00000554656 FAM74A4Q5TZK3 123 aa7.2□□□□□ -1.26
SHMT2-215ENST00000554656 ST20Q9HBF5 79 aa7.2□□□□□ -1.26
SHMT2-215ENST00000554656 NIT2Q9NQR4 276 aa7.2□□□□□ -1.26
SHMT2-215ENST00000554656 IGHV1-24A0A0C4DH33 117 aa7.19□□□□□ -1.26
SHMT2-215ENST00000554656 LOC389332A0A1B0GUA5 103 aa7.19□□□□□ -1.26
SHMT2-215ENST00000554656 LINC01549A6NIU2 74 aa7.19□□□□□ -1.26
SHMT2-215ENST00000554656 PAX4O43316 350 aa7.19□□□□□ -1.26
SHMT2-215ENST00000554656 GAS8-AS1O95177 125 aa7.19□□□□□ -1.26
SHMT2-215ENST00000554656 GATA1P15976 413 aaPredicted RBP7.19□□□□□ -1.26
SHMT2-215ENST00000554656 POLR2KP53803 58 aaKnown RBP7.19□□□□□ -1.26
SHMT2-215ENST00000554656 OR4C5Q8NGB2 326 aa7.19□□□□□ -1.26
SHMT2-215ENST00000554656 DNAJC30Q96LL9 226 aa7.19□□□□□ -1.26
SHMT2-215ENST00000554656 ICOSQ9Y6W8 199 aa7.19□□□□□ -1.26
SHMT2-215ENST00000554656 TRBV27A0A0K0K1C4 114 aa7.18□□□□□ -1.26
SHMT2-215ENST00000554656 HBDP02042 147 aa7.18□□□□□ -1.26
SHMT2-215ENST00000554656 DNAH10OSP0CZ25 163 aa7.18□□□□□ -1.26
SHMT2-215ENST00000554656 G0S2P27469 103 aa7.18□□□□□ -1.26
SHMT2-215ENST00000554656 CRYBA4P53673 196 aa7.18□□□□□ -1.26
SHMT2-215ENST00000554656 FHL2Q14192 279 aa7.18□□□□□ -1.26
SHMT2-215ENST00000554656 JOSD1Q15040 202 aaPredicted RBP7.18□□□□□ -1.26
SHMT2-215ENST00000554656 ORMDL2Q53FV1 153 aa7.18□□□□□ -1.26
SHMT2-215ENST00000554656 FAM19A2Q8N3H0 131 aa7.18□□□□□ -1.26
SHMT2-215ENST00000554656 RPL39LQ96EH5 51 aaKnown RBP7.18□□□□□ -1.26
SHMT2-215ENST00000554656 TMEM70Q9BUB7 260 aa7.18□□□□□ -1.26
SHMT2-215ENST00000554656 TRBV10-1A0A0K0K1A3 114 aa7.17□□□□□ -1.26
SHMT2-215ENST00000554656 VCYO14598 125 aa7.17□□□□□ -1.26
SHMT2-215ENST00000554656 LEPROTL1O95214 131 aa7.17□□□□□ -1.26
SHMT2-215ENST00000554656 FCER1GP30273 86 aa7.17□□□□□ -1.26
SHMT2-215ENST00000554656 LAGE3Q14657 143 aa7.17□□□□□ -1.26
SHMT2-215ENST00000554656 LYPD5Q6UWN5 251 aa7.17□□□□□ -1.26
SHMT2-215ENST00000554656 PRO0255Q9UI72 69 aa7.17□□□□□ -1.26
SHMT2-215ENST00000554656 HSPB8Q9UJY1 196 aa7.17□□□□□ -1.26
SHMT2-215ENST00000554656 SDHAF1A6NFY7 115 aa7.16□□□□□ -1.26
SHMT2-215ENST00000554656 XGP55808 180 aa7.16□□□□□ -1.26
SHMT2-215ENST00000554656 PYY3Q5JQD4 70 aa7.16□□□□□ -1.26
SHMT2-215ENST00000554656 LINC00518Q8N0U6 118 aa7.16□□□□□ -1.26
SHMT2-215ENST00000554656 KIR2DL4Q99706 377 aa7.16□□□□□ -1.26
SHMT2-215ENST00000554656 A0A096LNJ9 63 aa7.15□□□□□ -1.26
SHMT2-215ENST00000554656 KRTAP10-1P60331 282 aa7.15□□□□□ -1.26
SHMT2-215ENST00000554656 WFDC10BQ8IUB3 73 aa7.15□□□□□ -1.26
SHMT2-215ENST00000554656 ZNF479Q96JC4 524 aa7.15□□□□□ -1.26
SHMT2-215ENST00000554656 HHLA3Q9XRX5 114 aa7.15□□□□□ -1.26
SHMT2-215ENST00000554656 DMBT1Q9UGM3 2413 aaPredicted RBP7.15□□□□□ -1.27
SHMT2-215ENST00000554656 A0A087WTM6 91 aa7.14□□□□□ -1.27
SHMT2-215ENST00000554656 TRBV6-4A0A1B0GX49 114 aa7.14□□□□□ -1.27
SHMT2-215ENST00000554656 K7EQD1 137 aa7.14□□□□□ -1.27
SHMT2-215ENST00000554656 C3orf79P0CE67 100 aa7.14□□□□□ -1.27
SHMT2-215ENST00000554656 RHOHQ15669 191 aa7.14□□□□□ -1.27
SHMT2-215ENST00000554656 MRPL23Q16540 153 aaKnown RBP7.14□□□□□ -1.27
SHMT2-215ENST00000554656 NEGR1Q7Z3B1 354 aa7.14□□□□□ -1.27
SHMT2-215ENST00000554656 PGPEP1Q9NXJ5 209 aa7.14□□□□□ -1.27
SHMT2-215ENST00000554656 FAT1Q14517 4588 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 TRGV4A0A0C4DH28 118 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 LOC100131303A0A0U1RQF7 123 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 EPM2AB3EWF7 344 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 I3L3M4 83 aa7.13□□□□□ -1.27
SHMT2-215ENST00000554656 ATP5LO75964 103 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms