RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 CFAP126Q5VTH2 177 aa-0.46□□□□□ -2.48
GPN3-209ENST00000551079 RPL7L1Q6DKI1 246 aaKnown RBP-0.46□□□□□ -2.48
GPN3-209ENST00000551079 LRP6O75581 1613 aa-0.46□□□□□ -2.48
GPN3-209ENST00000551079 TMEM2Q9UHN6 1383 aa-0.46□□□□□ -2.48
GPN3-209ENST00000551079 FAM92AA1XBS5 289 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 M0R2Z0 102 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 BCE1O60756 84 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 DR1Q01658 176 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 WFDC2Q14508 124 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 SDF2Q99470 211 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 PSMG3Q9BT73 122 aaPredicted RBP-0.47□□□□□ -2.48
GPN3-209ENST00000551079 AGPAT4-IT1Q9H0P7 198 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 SAR1AQ9NR31 198 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 SCN3BQ9NY72 215 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 URB1O60287 2271 aaKnown RBP-0.47□□□□□ -2.48
GPN3-209ENST00000551079 LRRC37A3O60309 1634 aa-0.47□□□□□ -2.48
GPN3-209ENST00000551079 TSC2P49815 1807 aa-0.48□□□□□ -2.49
GPN3-209ENST00000551079 PSME4Q14997 1843 aa-0.48□□□□□ -2.49
GPN3-209ENST00000551079 ACANP16112 2415 aa-0.48□□□□□ -2.49
GPN3-209ENST00000551079 LOC105371267A0A1B0GV96 52 aa-0.48□□□□□ -2.49
GPN3-209ENST00000551079 APOC4-APOC2K7ER74 178 aa-0.48□□□□□ -2.49
GPN3-209ENST00000551079 CCL18P55774 89 aa-0.48□□□□□ -2.49
GPN3-209ENST00000551079 SPAG11BQ08648 103 aa-0.48□□□□□ -2.49
GPN3-209ENST00000551079 PYDC1Q8WXC3 89 aa-0.48□□□□□ -2.49
GPN3-209ENST00000551079 SRRM2Q9UQ35 2752 aaKnown RBP-0.48□□□□□ -2.49
GPN3-209ENST00000551079 MRC1P22897 1456 aa-0.48□□□□□ -2.49
GPN3-209ENST00000551079 UNC13AQ9UPW8 1703 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 SPINK8P0C7L1 97 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 CBLN1P23435 193 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 BAGE3Q86Y29 109 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 SPTSSAQ969W0 71 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 SEC11CQ9BY50 192 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 NPVFQ9HCQ7 196 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 SPANXCQ9NY87 97 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 CHD8Q9HCK8 2581 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 BICRAQ9NZM4 1560 aa-0.49□□□□□ -2.49
GPN3-209ENST00000551079 TRAV22A0A0B4J277 110 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 A6NIN4 97 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 SNCGO76070 127 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 SPRR1AP35321 89 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 RPS25P62851 125 aaKnown RBP-0.5□□□□□ -2.49
GPN3-209ENST00000551079 RBM3P98179 157 aaKnown RBP-0.5□□□□□ -2.49
GPN3-209ENST00000551079 SMIM21Q3B7S5 101 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 ZNF818PQ6ZRF7 136 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 TPT1P8Q9HAU6 139 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 SPANXA1Q9NS26 97 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 SCP2D1Q9UJQ7 156 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 MUC2Q02817 5179 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 BTAF1O14981 1849 aa-0.5□□□□□ -2.49
GPN3-209ENST00000551079 A0A0D9SFI3 127 aa-0.51□□□□□ -2.49
GPN3-209ENST00000551079 HCG22E2RYF7 251 aa-0.51□□□□□ -2.49
GPN3-209ENST00000551079 NDUFB6O95139 128 aa-0.51□□□□□ -2.49
GPN3-209ENST00000551079 NCR2O95944 276 aa-0.51□□□□□ -2.49
GPN3-209ENST00000551079 IFNA17P01571 189 aa-0.51□□□□□ -2.49
GPN3-209ENST00000551079 PIPP12273 146 aaPredicted RBP-0.51□□□□□ -2.49
GPN3-209ENST00000551079 HIST1H1DP16402 221 aaKnown RBP-0.51□□□□□ -2.49
GPN3-209ENST00000551079 EP300Q09472 2414 aaPredicted RBP-0.51□□□□□ -2.49
GPN3-209ENST00000551079 MYOM3Q5VTT5 1437 aa-0.51□□□□□ -2.49
GPN3-209ENST00000551079 Q5VV11 94 aa-0.51□□□□□ -2.49
GPN3-209ENST00000551079 SBF2Q86WG5 1849 aa-0.51□□□□□ -2.49
GPN3-209ENST00000551079 ANP32BQ92688 251 aaKnown RBP-0.51□□□□□ -2.49
GPN3-209ENST00000551079 LSM10Q969L4 123 aaKnown RBP-0.51□□□□□ -2.49
GPN3-209ENST00000551079 COL6A3P12111 3177 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 ZNF609O15014 1411 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 DAPK1P53355 1430 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 I3L2K1 104 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 J3QR89 54 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 M0R135 149 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 PPP1R17O96001 155 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 CCL8P80075 99 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 Q8IZM0 81 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 LZICQ8WZA0 190 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 DNAJC13O75165 2243 aa-0.52□□□□□ -2.49
GPN3-209ENST00000551079 ZNF518AQ6AHZ1 1483 aa-0.53□□□□□ -2.49
GPN3-209ENST00000551079 C10orf71Q711Q0 1435 aa-0.53□□□□□ -2.49
GPN3-209ENST00000551079 COPZ1P61923 177 aa-0.53□□□□□ -2.49
GPN3-209ENST00000551079 Q5VSD8 79 aa-0.53□□□□□ -2.49
GPN3-209ENST00000551079 MAFIPQ8WZ33 124 aa-0.53□□□□□ -2.49
GPN3-209ENST00000551079 DPH3Q96FX2 82 aa-0.53□□□□□ -2.49
GPN3-209ENST00000551079 COPZ2Q9P299 210 aa-0.53□□□□□ -2.49
GPN3-209ENST00000551079 KIF21AQ7Z4S6 1674 aa-0.53□□□□□ -2.49
GPN3-209ENST00000551079 ERCC6L2Q5T890 1561 aa-0.53□□□□□ -2.49
GPN3-209ENST00000551079 IFT140Q96RY7 1462 aa-0.54□□□□□ -2.5
GPN3-209ENST00000551079 PIN1P1O15428 100 aa-0.54□□□□□ -2.5
GPN3-209ENST00000551079 SIX6O95475 246 aa-0.54□□□□□ -2.5
GPN3-209ENST00000551079 KCNRGQ8N5I3 272 aa-0.54□□□□□ -2.5
GPN3-209ENST00000551079 Q8N8P6 123 aa-0.54□□□□□ -2.5
GPN3-209ENST00000551079 LINC00472Q9H8W2 130 aa-0.54□□□□□ -2.5
GPN3-209ENST00000551079 PAPPAQ13219 1627 aa-0.54□□□□□ -2.5
GPN3-209ENST00000551079 LRP1BQ9NZR2 4599 aa-0.54□□□□□ -2.5
GPN3-209ENST00000551079 BCL9LQ86UU0 1499 aa-0.54□□□□□ -2.5
GPN3-209ENST00000551079 SETXQ7Z333 2677 aaKnown RBP-0.55□□□□□ -2.5
GPN3-209ENST00000551079 FLNBO75369 2602 aaKnown RBP-0.55□□□□□ -2.5
GPN3-209ENST00000551079 FXYD6-FXYD2A0A087WZ82 144 aa-0.55□□□□□ -2.5
GPN3-209ENST00000551079 TRAV13-2A0A0B4J235 113 aa-0.55□□□□□ -2.5
GPN3-209ENST00000551079 ALX1Q15699 326 aa-0.55□□□□□ -2.5
GPN3-209ENST00000551079 C10orf128Q5T292 105 aa-0.55□□□□□ -2.5
GPN3-209ENST00000551079 SCIMPQ6UWF3 145 aa-0.55□□□□□ -2.5
GPN3-209ENST00000551079 CNOT1A5YKK6 2376 aaKnown RBP-0.55□□□□□ -2.5
GPN3-209ENST00000551079 PXDNQ92626 1479 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms