RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 NTF3P20783 257 aa7.53□□□□□ -1.2
RAB5C-203ENST00000546881 CTRLP40313 264 aa7.53□□□□□ -1.2
RAB5C-203ENST00000546881 RAB4BP61018 213 aa7.53□□□□□ -1.2
RAB5C-203ENST00000546881 CT83Q5H943 113 aa7.53□□□□□ -1.2
RAB5C-203ENST00000546881 UFSP1Q6NVU6 142 aa7.53□□□□□ -1.2
RAB5C-203ENST00000546881 NIT1Q86X76 327 aa7.53□□□□□ -1.2
RAB5C-203ENST00000546881 RPS10P5Q9NQ39 176 aa7.53□□□□□ -1.2
RAB5C-203ENST00000546881 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
RAB5C-203ENST00000546881 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.52□□□□□ -1.21
RAB5C-203ENST00000546881 TSKUQ8WUA8 353 aa7.52□□□□□ -1.21
RAB5C-203ENST00000546881 GTSF1Q8WW33 167 aa7.52□□□□□ -1.21
RAB5C-203ENST00000546881 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
RAB5C-203ENST00000546881 CHAC1Q9BUX1 264 aa7.52□□□□□ -1.21
RAB5C-203ENST00000546881 TMEM242Q9NWH2 141 aa7.52□□□□□ -1.21
RAB5C-203ENST00000546881 HIGD1CA8MV81 97 aa7.51□□□□□ -1.21
RAB5C-203ENST00000546881 TMEM262E9PQX1 116 aa7.51□□□□□ -1.21
RAB5C-203ENST00000546881 WDR73Q6P4I2 378 aa7.51□□□□□ -1.21
RAB5C-203ENST00000546881 CIRBP-AS1Q8TBR5 109 aa7.51□□□□□ -1.21
RAB5C-203ENST00000546881 CTDSP1Q9GZU7 261 aa7.51□□□□□ -1.21
RAB5C-203ENST00000546881 GFRA4Q9GZZ7 299 aa7.51□□□□□ -1.21
RAB5C-203ENST00000546881 DPH3P1Q9H4G8 78 aa7.51□□□□□ -1.21
RAB5C-203ENST00000546881 SMCO4Q9NRQ5 59 aa7.51□□□□□ -1.21
RAB5C-203ENST00000546881 V9GYV3 84 aa7.51□□□□□ -1.21
RAB5C-203ENST00000546881 TRBV10-1A0A0K0K1A3 114 aa7.5□□□□□ -1.21
RAB5C-203ENST00000546881 H7C1H1 209 aa7.5□□□□□ -1.21
RAB5C-203ENST00000546881 ELOBQ15370 118 aa7.5□□□□□ -1.21
RAB5C-203ENST00000546881 ANAPC16Q96DE5 110 aa7.5□□□□□ -1.21
RAB5C-203ENST00000546881 NAT8BQ9UHF3 227 aa7.5□□□□□ -1.21
RAB5C-203ENST00000546881 A0A1B0GUT8 65 aa7.49□□□□□ -1.21
RAB5C-203ENST00000546881 FAM231BA6NCW3 169 aa7.49□□□□□ -1.21
RAB5C-203ENST00000546881 CRPP02741 224 aa7.49□□□□□ -1.21
RAB5C-203ENST00000546881 MT-ND4LP03901 98 aa7.49□□□□□ -1.21
RAB5C-203ENST00000546881 RIGQ13278 110 aa7.49□□□□□ -1.21
RAB5C-203ENST00000546881 SERTAD4-AS1Q5TG53 156 aa7.49□□□□□ -1.21
RAB5C-203ENST00000546881 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
RAB5C-203ENST00000546881 C1orf43Q9BWL3 253 aa7.49□□□□□ -1.21
RAB5C-203ENST00000546881 CNFNQ9BYD5 112 aa7.49□□□□□ -1.21
RAB5C-203ENST00000546881 TRBV7-3A0A075B6L6 115 aa7.48□□□□□ -1.21
RAB5C-203ENST00000546881 COLCA2A8K830 154 aa7.48□□□□□ -1.21
RAB5C-203ENST00000546881 PPP1R2P9O14990 202 aa7.48□□□□□ -1.21
RAB5C-203ENST00000546881 Q0VG73 95 aa7.48□□□□□ -1.21
RAB5C-203ENST00000546881 NUP35Q8NFH5 326 aa7.48□□□□□ -1.21
RAB5C-203ENST00000546881 CHCHD7Q9BUK0 85 aa7.48□□□□□ -1.21
RAB5C-203ENST00000546881 HLA-DQA1P01909 254 aa7.47□□□□□ -1.21
RAB5C-203ENST00000546881 FOXA3P55318 350 aaPredicted RBP7.47□□□□□ -1.21
RAB5C-203ENST00000546881 KRTAP10-4P60372 401 aaPredicted RBP7.47□□□□□ -1.21
RAB5C-203ENST00000546881 UBE2D3P61077 147 aa7.47□□□□□ -1.21
RAB5C-203ENST00000546881 UBE2D2P62837 147 aa7.47□□□□□ -1.21
RAB5C-203ENST00000546881 C14orf177Q52M58 125 aa7.47□□□□□ -1.21
RAB5C-203ENST00000546881 NEXN-AS1Q8NBZ9 246 aa7.47□□□□□ -1.21
RAB5C-203ENST00000546881 KIF25-AS1Q9Y6Z4 181 aa7.47□□□□□ -1.21
RAB5C-203ENST00000546881 OXTP01178 125 aa7.46□□□□□ -1.22
RAB5C-203ENST00000546881 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.22
RAB5C-203ENST00000546881 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.22
RAB5C-203ENST00000546881 RASL11AQ6T310 242 aa7.46□□□□□ -1.22
RAB5C-203ENST00000546881 IMMP2LQ96T52 175 aa7.46□□□□□ -1.22
RAB5C-203ENST00000546881 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
RAB5C-203ENST00000546881 TRBV24-1A0A075B6N3 115 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 TRBV6-8A0A0A6YYG3 113 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 TRAV26-2A0A0B4J265 109 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 SMIM27A0A1W2PRY6 76 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 M0QY20 66 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 CAMPP49913 170 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 MPV17L2Q567V2 206 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 ENHOQ6UWT2 76 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 CHCHD5Q9BSY4 110 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 PLA2G2DQ9UNK4 145 aa7.45□□□□□ -1.22
RAB5C-203ENST00000546881 TGIF2-C20orf24A0A0A6YYL0 155 aa7.44□□□□□ -1.22
RAB5C-203ENST00000546881 USP17L23D6RBM5 183 aa7.44□□□□□ -1.22
RAB5C-203ENST00000546881 S100A8P05109 93 aa7.44□□□□□ -1.22
RAB5C-203ENST00000546881 MRPL54Q6P161 138 aaKnown RBP7.44□□□□□ -1.22
RAB5C-203ENST00000546881 TMEM191AQ9H0A3 160 aa7.44□□□□□ -1.22
RAB5C-203ENST00000546881 NIT2Q9NQR4 276 aa7.44□□□□□ -1.22
RAB5C-203ENST00000546881 HMCN2Q8NDA2 5059 aa7.44□□□□□ -1.22
RAB5C-203ENST00000546881 TRAV9-1A0A075B6T8 112 aa7.43□□□□□ -1.22
RAB5C-203ENST00000546881 TMEM97Q5BJF2 176 aa7.43□□□□□ -1.22
RAB5C-203ENST00000546881 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
RAB5C-203ENST00000546881 GATD1Q8NB37 220 aa7.43□□□□□ -1.22
RAB5C-203ENST00000546881 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
RAB5C-203ENST00000546881 A0A1B0GW15 77 aa7.42□□□□□ -1.22
RAB5C-203ENST00000546881 RAB5AP20339 215 aa7.42□□□□□ -1.22
RAB5C-203ENST00000546881 HBBP68871 147 aa7.42□□□□□ -1.22
RAB5C-203ENST00000546881 AMN1Q8IY45 258 aa7.42□□□□□ -1.22
RAB5C-203ENST00000546881 TRBV25-1A0A075B6N4 114 aa7.41□□□□□ -1.22
RAB5C-203ENST00000546881 PRSS1P07477 247 aa7.41□□□□□ -1.22
RAB5C-203ENST00000546881 S100PP25815 95 aa7.41□□□□□ -1.22
RAB5C-203ENST00000546881 PKIAP61925 76 aa7.41□□□□□ -1.22
RAB5C-203ENST00000546881 GAGE6Q13070 117 aa7.41□□□□□ -1.22
RAB5C-203ENST00000546881 MIAQ16674 131 aa7.41□□□□□ -1.22
RAB5C-203ENST00000546881 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
RAB5C-203ENST00000546881 MRAP2Q96G30 205 aa7.41□□□□□ -1.22
RAB5C-203ENST00000546881 IGHV1-24A0A0C4DH33 117 aa7.4□□□□□ -1.22
RAB5C-203ENST00000546881 PHOX2AO14813 284 aa7.4□□□□□ -1.22
RAB5C-203ENST00000546881 NCR2O95944 276 aa7.4□□□□□ -1.22
RAB5C-203ENST00000546881 RAB4AP20338 218 aa7.4□□□□□ -1.22
RAB5C-203ENST00000546881 HNRNPA3P51991 378 aaKnown RBP7.4□□□□□ -1.22
RAB5C-203ENST00000546881 COTL1Q14019 142 aa7.4□□□□□ -1.22
RAB5C-203ENST00000546881 ATP5L2Q7Z4Y8 100 aa7.4□□□□□ -1.22
RAB5C-203ENST00000546881 LINC00269Q8N2A0 174 aa7.4□□□□□ -1.22
RAB5C-203ENST00000546881 ST20Q9HBF5 79 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms