RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 NRGNQ92686 78 aa6.15□□□□□ -1.42
PRKAB1-207ENST00000542698 ICOSQ9Y6W8 199 aa6.15□□□□□ -1.42
PRKAB1-207ENST00000542698 IGHV1-58A0A0C4DH39 117 aa6.15□□□□□ -1.42
PRKAB1-207ENST00000542698 C19orf84I3L1E1 186 aa6.15□□□□□ -1.42
PRKAB1-207ENST00000542698 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.42
PRKAB1-207ENST00000542698 GAGE6Q13070 117 aa6.15□□□□□ -1.42
PRKAB1-207ENST00000542698 RNF152Q8N8N0 203 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 DAND5Q8N907 189 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 WDFY4Q6ZS81 3184 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 TRBV7-3A0A075B6L6 115 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 M0QY20 66 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 LGALS9O00182 355 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 SS18Q15532 418 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 S100A7L2Q5SY68 101 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 TMEM61Q8N0U2 210 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 Q96MF0 132 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 ODF3Q96PU9 254 aa6.15□□□□□ -1.43
PRKAB1-207ENST00000542698 TRAV13-2A0A0B4J235 113 aa6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 NOP10Q9NPE3 64 aaKnown RBP6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 MUC3AQ02505 3323 aa6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 P0DMU3 169 aa6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 FAM231AP0DMU4 169 aa6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 FAM231CP0DMU5 169 aa6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 A0A0J9YXY3 114 aa6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 TRBV10-2A0A0K0K1G8 114 aa6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 B5MCH6 92 aa6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 ZNF22P17026 224 aaPredicted RBP6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 RPL32P62910 135 aaKnown RBP6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 PSMG3-AS1Q96PY0 264 aa6.14□□□□□ -1.43
PRKAB1-207ENST00000542698 TRBV6-5A0A0K0K1A5 114 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 KLLNB2CW77 178 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 ZFYVE26Q68DK2 2539 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 POLQO75417 2590 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 IGLV2-18A0A075B6J9 118 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 IGLV4-3A0A075B6K6 122 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 BAALC-AS2P0C853 105 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 CELSR3Q9NYQ7 3312 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 A0A0B4J2C4 111 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 HERV-K104P63124 156 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 Q6ZUT4 128 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 VSIG2Q96IQ7 327 aa6.13□□□□□ -1.43
PRKAB1-207ENST00000542698 HIST1H4AP62805 103 aaKnown RBP6.12□□□□□ -1.43
PRKAB1-207ENST00000542698 TMEM223A0PJW6 202 aa6.12□□□□□ -1.43
PRKAB1-207ENST00000542698 CCL24O00175 119 aa6.12□□□□□ -1.43
PRKAB1-207ENST00000542698 MTORP42345 2549 aa6.12□□□□□ -1.43
PRKAB1-207ENST00000542698 H3BT86 120 aa6.12□□□□□ -1.43
PRKAB1-207ENST00000542698 GHRHP01286 108 aa6.12□□□□□ -1.43
PRKAB1-207ENST00000542698 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
PRKAB1-207ENST00000542698 Q6ZS46 218 aa6.12□□□□□ -1.43
PRKAB1-207ENST00000542698 TRAV26-1A0A087WT03 109 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 IGIPA6NJ69 53 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 MT-ATP8P03928 68 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 INSL3P51460 131 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 DAZ2Q13117 558 aaKnown RBP6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 CFAP126Q5VTH2 177 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 DAZ4Q86SG3 579 aaKnown RBP6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 EDA2RQ9HAV5 297 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 DAZ3Q9NR90 486 aaKnown RBP6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 PRRC2AP48634 2157 aaKnown RBP6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 SOCS3O14543 225 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 IGHV3-30P01768 117 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 CRYGDP07320 174 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 IGHV3-30-5P0DP03 117 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 C10orf99Q6UWK7 81 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 CLEC2BQ92478 149 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 A0A1W2PPR1 153 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 NXPH4O95158 308 aa6.11□□□□□ -1.43
PRKAB1-207ENST00000542698 MIAQ16674 131 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 C9orf153Q5TBE3 101 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 DCANP1Q8TF63 244 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 CDKN2A-AS1Q9UH64 79 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 TINCRA0A1B0GVN0 87 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 ACYP1P07311 99 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 C5orf38Q86SI9 138 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 NFE4Q86UQ8 179 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 LAMTOR3Q9UHA4 124 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 PSMB8P28062 276 aa6.1□□□□□ -1.43
PRKAB1-207ENST00000542698 K7EQD1 137 aa6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 SPANXDQ9BXN6 97 aa6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 JMJD1CQ15652 2540 aa6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 IGLV1-40P01703 118 aa6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 PROK1P58294 105 aa6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 COL27A1Q8IZC6 1860 aaPredicted RBP6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 TEX49A0A1B0GTD5 131 aa6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 UBE2D1P51668 147 aa6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 PYGO1Q9Y3Y4 419 aa6.09□□□□□ -1.43
PRKAB1-207ENST00000542698 TSHBP01222 138 aa6.09□□□□□ -1.44
PRKAB1-207ENST00000542698 C9orf85Q96MD7 179 aa6.09□□□□□ -1.44
PRKAB1-207ENST00000542698 SPATA25Q9BR10 227 aa6.09□□□□□ -1.44
PRKAB1-207ENST00000542698 TRBV10-1A0A0K0K1A3 114 aa6.08□□□□□ -1.44
PRKAB1-207ENST00000542698 LINC00467Q9BRT7 94 aa6.08□□□□□ -1.44
PRKAB1-207ENST00000542698 MAP6D1Q9H9H5 199 aa6.08□□□□□ -1.44
PRKAB1-207ENST00000542698 SS18L2Q9UHA2 77 aa6.08□□□□□ -1.44
PRKAB1-207ENST00000542698 TRBV30A0A0K0K1B3 111 aa6.08□□□□□ -1.44
PRKAB1-207ENST00000542698 TRIAP1O43715 76 aa6.08□□□□□ -1.44
PRKAB1-207ENST00000542698 XCL1P47992 114 aa6.08□□□□□ -1.44
PRKAB1-207ENST00000542698 DEFB113Q30KQ7 82 aa6.08□□□□□ -1.44
PRKAB1-207ENST00000542698 MGAQ8IWI9 3026 aa6.07□□□□□ -1.44
PRKAB1-207ENST00000542698 CRIP2P52943 208 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms