RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 LY6EQ16553 131 aa12.65□□□□□ -0.38
C2CD3-213ENST00000539061 CEMP1Q6PRD7 247 aaPredicted RBP12.65□□□□□ -0.38
C2CD3-213ENST00000539061 BRD3OSQ6XYD6 125 aa12.65□□□□□ -0.38
C2CD3-213ENST00000539061 ACYP1P07311 99 aa12.64□□□□□ -0.39
C2CD3-213ENST00000539061 RNASE13Q5GAN3 156 aaKnown RBP12.64□□□□□ -0.39
C2CD3-213ENST00000539061 TMEM126AQ9H061 195 aa12.64□□□□□ -0.39
C2CD3-213ENST00000539061 A8MZ25 164 aa12.64□□□□□ -0.39
C2CD3-213ENST00000539061 SPINK13Q1W4C9 94 aa12.64□□□□□ -0.39
C2CD3-213ENST00000539061 NBASA2RRP1 2371 aa12.64□□□□□ -0.39
C2CD3-213ENST00000539061 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
C2CD3-213ENST00000539061 SNRPD3P62318 126 aaKnown RBP12.63□□□□□ -0.39
C2CD3-213ENST00000539061 IMUPQ9GZP8 106 aa12.63□□□□□ -0.39
C2CD3-213ENST00000539061 EDA2RQ9HAV5 297 aa12.63□□□□□ -0.39
C2CD3-213ENST00000539061 IGLV1-40P01703 118 aa12.62□□□□□ -0.39
C2CD3-213ENST00000539061 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
C2CD3-213ENST00000539061 BLCAPP62952 87 aa12.61□□□□□ -0.39
C2CD3-213ENST00000539061 LY6DQ14210 128 aa12.61□□□□□ -0.39
C2CD3-213ENST00000539061 COL6A6A6NMZ7 2263 aa12.61□□□□□ -0.39
C2CD3-213ENST00000539061 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
C2CD3-213ENST00000539061 LINC01587Q99440 93 aa12.61□□□□□ -0.39
C2CD3-213ENST00000539061 FAM236AA0A1B0GUQ0 79 aa12.59□□□□□ -0.39
C2CD3-213ENST00000539061 FAM236BA0A1B0GV22 79 aa12.59□□□□□ -0.39
C2CD3-213ENST00000539061 H3BUX3 64 aa12.59□□□□□ -0.39
C2CD3-213ENST00000539061 CIRBPQ14011 172 aaKnown RBP12.59□□□□□ -0.39
C2CD3-213ENST00000539061 DAND5Q8N907 189 aa12.59□□□□□ -0.39
C2CD3-213ENST00000539061 CITED2Q99967 270 aaPredicted RBP12.59□□□□□ -0.39
C2CD3-213ENST00000539061 UBE2D4Q9Y2X8 147 aa12.59□□□□□ -0.39
C2CD3-213ENST00000539061 A6NDX4 124 aa12.59□□□□□ -0.39
C2CD3-213ENST00000539061 K7EQG2 157 aa12.58□□□□□ -0.4
C2CD3-213ENST00000539061 PROK1P58294 105 aa12.58□□□□□ -0.4
C2CD3-213ENST00000539061 CACNA1AO00555 2505 aa12.58□□□□□ -0.4
C2CD3-213ENST00000539061 NDUFA1O15239 70 aa12.58□□□□□ -0.4
C2CD3-213ENST00000539061 DUX5Q96PT3 197 aa12.58□□□□□ -0.4
C2CD3-213ENST00000539061 CHCHD7Q9BUK0 85 aa12.58□□□□□ -0.4
C2CD3-213ENST00000539061 ITPR1Q14643 2758 aa12.57□□□□□ -0.4
C2CD3-213ENST00000539061 COX7A2LO14548 114 aa12.56□□□□□ -0.4
C2CD3-213ENST00000539061 KLRB1Q12918 225 aa12.56□□□□□ -0.4
C2CD3-213ENST00000539061 C3orf56Q8N813 242 aa12.56□□□□□ -0.4
C2CD3-213ENST00000539061 LINC00643Q86TS7 51 aa12.56□□□□□ -0.4
C2CD3-213ENST00000539061 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.55□□□□□ -0.4
C2CD3-213ENST00000539061 IGKV2-29A2NJV5 120 aaPredicted RBP12.55□□□□□ -0.4
C2CD3-213ENST00000539061 LINC00308Q8TCZ7 52 aa12.55□□□□□ -0.4
C2CD3-213ENST00000539061 CDKN2A-AS1Q9UH64 79 aa12.55□□□□□ -0.4
C2CD3-213ENST00000539061 CFHR3Q02985 330 aa12.55□□□□□ -0.4
C2CD3-213ENST00000539061 RNF152Q8N8N0 203 aa12.55□□□□□ -0.4
C2CD3-213ENST00000539061 TIRAPP58753 221 aa12.54□□□□□ -0.4
C2CD3-213ENST00000539061 IGHV4-38-2P0DP08 117 aa12.54□□□□□ -0.4
C2CD3-213ENST00000539061 HTN1P15515 57 aa12.54□□□□□ -0.4
C2CD3-213ENST00000539061 LINC00467Q9BRT7 94 aa12.53□□□□□ -0.4
C2CD3-213ENST00000539061 IGLV5-45A0A087WSX0 123 aa12.53□□□□□ -0.4
C2CD3-213ENST00000539061 SMCR5Q8TEV8 140 aa12.53□□□□□ -0.4
C2CD3-213ENST00000539061 PKD1L2Q7Z442 2459 aa12.52□□□□□ -0.4
C2CD3-213ENST00000539061 KNCNA6PVL3 124 aa12.52□□□□□ -0.41
C2CD3-213ENST00000539061 C3orf22Q8N5N4 141 aa12.52□□□□□ -0.41
C2CD3-213ENST00000539061 COPS9Q8WXC6 57 aa12.52□□□□□ -0.41
C2CD3-213ENST00000539061 PRORYQ9H606 182 aa12.52□□□□□ -0.41
C2CD3-213ENST00000539061 Q9UF83 564 aa12.52□□□□□ -0.41
C2CD3-213ENST00000539061 SPTAN1Q13813 2472 aaKnown RBP12.52□□□□□ -0.41
C2CD3-213ENST00000539061 RBMY1A1P0DJD3 496 aaKnown RBP12.51□□□□□ -0.41
C2CD3-213ENST00000539061 RBMY1CP0DJD4 496 aa12.51□□□□□ -0.41
C2CD3-213ENST00000539061 DAZ2Q13117 558 aaKnown RBP12.51□□□□□ -0.41
C2CD3-213ENST00000539061 RBMY1FQ15415 496 aaKnown RBP12.51□□□□□ -0.41
C2CD3-213ENST00000539061 C9orf153Q5TBE3 101 aa12.51□□□□□ -0.41
C2CD3-213ENST00000539061 DAZ4Q86SG3 579 aaKnown RBP12.51□□□□□ -0.41
C2CD3-213ENST00000539061 Q9H8V8 135 aa12.51□□□□□ -0.41
C2CD3-213ENST00000539061 DAZ3Q9NR90 486 aaKnown RBP12.51□□□□□ -0.41
C2CD3-213ENST00000539061 VPREB3Q9UKI3 123 aa12.51□□□□□ -0.41
C2CD3-213ENST00000539061 DOPEY2Q9Y3R5 2298 aa12.5□□□□□ -0.41
C2CD3-213ENST00000539061 TRACP01848 142 aa12.5□□□□□ -0.41
C2CD3-213ENST00000539061 ATP5G1P05496 136 aa12.5□□□□□ -0.41
C2CD3-213ENST00000539061 Q6ZSN1 163 aa12.5□□□□□ -0.41
C2CD3-213ENST00000539061 AKAP6Q13023 2319 aa12.5□□□□□ -0.41
C2CD3-213ENST00000539061 PSMB8P28062 276 aa12.5□□□□□ -0.41
C2CD3-213ENST00000539061 ZFHX3Q15911 3703 aa12.5□□□□□ -0.41
C2CD3-213ENST00000539061 UQCRQO14949 82 aa12.49□□□□□ -0.41
C2CD3-213ENST00000539061 BAALC-AS2P0C853 105 aa12.49□□□□□ -0.41
C2CD3-213ENST00000539061 DGAT2L7PQ6IED9 249 aa12.49□□□□□ -0.41
C2CD3-213ENST00000539061 SDIM1Q6ZPB5 146 aa12.49□□□□□ -0.41
C2CD3-213ENST00000539061 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.49□□□□□ -0.41
C2CD3-213ENST00000539061 TMEM95Q3KNT9 176 aa12.48□□□□□ -0.41
C2CD3-213ENST00000539061 PIK3CD-AS1Q5SR53 167 aa12.48□□□□□ -0.41
C2CD3-213ENST00000539061 ZNF625Q96I27 306 aaPredicted RBP12.48□□□□□ -0.41
C2CD3-213ENST00000539061 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
C2CD3-213ENST00000539061 ACACBO00763 2458 aa12.48□□□□□ -0.41
C2CD3-213ENST00000539061 IGHV3-38A0A0C4DH36 116 aa12.48□□□□□ -0.41
C2CD3-213ENST00000539061 IGLV5-39A0A0G2JS06 123 aa12.48□□□□□ -0.41
C2CD3-213ENST00000539061 A0A0U1RRA0 63 aa12.48□□□□□ -0.41
C2CD3-213ENST00000539061 NDUFA7O95182 113 aa12.48□□□□□ -0.41
C2CD3-213ENST00000539061 DNAJC30Q96LL9 226 aa12.48□□□□□ -0.41
C2CD3-213ENST00000539061 CXCL5P42830 114 aa12.47□□□□□ -0.41
C2CD3-213ENST00000539061 COX6A2Q02221 97 aa12.47□□□□□ -0.41
C2CD3-213ENST00000539061 Q8N2B8 174 aa12.47□□□□□ -0.41
C2CD3-213ENST00000539061 HERVK_113P63121 156 aa12.47□□□□□ -0.41
C2CD3-213ENST00000539061 BEAN1Q3B7T3 259 aa12.47□□□□□ -0.41
C2CD3-213ENST00000539061 LINC00526Q96FQ7 95 aa12.47□□□□□ -0.41
C2CD3-213ENST00000539061 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
C2CD3-213ENST00000539061 SORL1Q92673 2214 aa12.47□□□□□ -0.41
C2CD3-213ENST00000539061 ABCA2Q9BZC7 2435 aa12.46□□□□□ -0.41
C2CD3-213ENST00000539061 IGHV4-61A0A0C4DH41 118 aa12.46□□□□□ -0.41
C2CD3-213ENST00000539061 SYNJ2BPP57105 145 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms