RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 HSD52Q0P140 79 aa5.9□□□□□ -1.47
NEDD8-207ENST00000533242 SPINK13Q1W4C9 94 aa5.9□□□□□ -1.47
NEDD8-207ENST00000533242 OR4C5Q8NGB2 326 aa5.9□□□□□ -1.47
NEDD8-207ENST00000533242 RAB37Q96AX2 223 aa5.9□□□□□ -1.47
NEDD8-207ENST00000533242 TOMM6Q96B49 74 aa5.9□□□□□ -1.47
NEDD8-207ENST00000533242 AP1S3Q96PC3 154 aa5.9□□□□□ -1.47
NEDD8-207ENST00000533242 CSTL1Q9H114 145 aa5.9□□□□□ -1.47
NEDD8-207ENST00000533242 K7ERJ3 54 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 SIVA1O15304 175 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 DUSP14O95147 198 aaKnown RBP5.89□□□□□ -1.47
NEDD8-207ENST00000533242 PRM2P04554 102 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 RBMY1A1P0DJD3 496 aaKnown RBP5.89□□□□□ -1.47
NEDD8-207ENST00000533242 RBMY1CP0DJD4 496 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 CMC4P56277 68 aaPredicted RBP5.89□□□□□ -1.47
NEDD8-207ENST00000533242 SEC11AP67812 179 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 RBMY1FQ15415 496 aaKnown RBP5.89□□□□□ -1.47
NEDD8-207ENST00000533242 SUMO4Q6EEV6 95 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 FAM159AQ6UWV7 190 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 C2orf66Q6UXQ4 117 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 POM121L12Q8N7R1 296 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 C20orf78Q9BR46 151 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 KIAA1109Q2LD37 5005 aa5.89□□□□□ -1.47
NEDD8-207ENST00000533242 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.88□□□□□ -1.47
NEDD8-207ENST00000533242 H3BUT2 72 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 TSHBP01222 138 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 MORN3Q6PF18 240 aaPredicted RBP5.88□□□□□ -1.47
NEDD8-207ENST00000533242 NEXN-AS1Q8NBZ9 246 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 BAALCQ8WXS3 180 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 SCGB3A1Q96QR1 104 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 CHAC1Q9BUX1 264 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 IGHV3-16A0A0C4DH30 117 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 J3QL48 77 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 CRYGDP07320 174 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 GCSHP23434 173 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 ID1P41134 155 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 RBX1P62877 108 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 RPL39P62891 51 aaKnown RBP5.88□□□□□ -1.47
NEDD8-207ENST00000533242 FAM74A4Q5TZK3 123 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 OR11H2Q8NH07 326 aa5.88□□□□□ -1.47
NEDD8-207ENST00000533242 F8VRH5 84 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 EMP1P54849 157 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 ORMDL2Q53FV1 153 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 AMTNQ6UX39 209 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 C9orf85Q96MD7 179 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 C9orf118A6NHY6 69 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 PRSS29PA6NIE9 313 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 IGLL5B9A064 214 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 H3BRM9 83 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 POLR2KP53803 58 aaKnown RBP5.87□□□□□ -1.47
NEDD8-207ENST00000533242 UFSP1Q6NVU6 142 aa5.87□□□□□ -1.47
NEDD8-207ENST00000533242 TRAV12-1A0A0B4J245 112 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 KNCNA6PVL3 124 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 H7C1H1 209 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
NEDD8-207ENST00000533242 VPS13DQ5THJ4 4388 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 A6NDN8 102 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 F5H697 171 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 HLA-DRB4P13762 266 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 CDKN1BP46527 198 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 SNRPD3P62318 126 aaKnown RBP5.86□□□□□ -1.47
NEDD8-207ENST00000533242 ZFP2Q6ZN57 461 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 HIGD1BQ9P298 99 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 HLA-DRB4X5D2U9 266 aa5.86□□□□□ -1.47
NEDD8-207ENST00000533242 IGLV4-69A0A075B6H9 119 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 SDHAF1A6NFY7 115 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 IGIPA6NJ69 53 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 PLNP26678 52 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 C21orf62-AS1Q17RA5 79 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 CST9LQ9H4G1 147 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 Q9UF83 564 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 NACAE9PAV3 2078 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 TRAV10A0A0B4J240 114 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 GAGE12BA1L429 117 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 A6NJY4 79 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 M0QY20 66 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 ODF3Q96PU9 254 aa5.85□□□□□ -1.47
NEDD8-207ENST00000533242 OPRPNQ99935 248 aaPredicted RBP5.85□□□□□ -1.47
NEDD8-207ENST00000533242 IGHV1OR15-1A0A075B7D0 117 aa5.84□□□□□ -1.47
NEDD8-207ENST00000533242 C11orf86A6NJI1 115 aa5.84□□□□□ -1.47
NEDD8-207ENST00000533242 DEFB4AO15263 64 aa5.84□□□□□ -1.47
NEDD8-207ENST00000533242 HTN1P15515 57 aa5.84□□□□□ -1.47
NEDD8-207ENST00000533242 CEND1Q8N111 149 aa5.84□□□□□ -1.47
NEDD8-207ENST00000533242 NHP2Q9NX24 153 aaKnown RBP5.84□□□□□ -1.47
NEDD8-207ENST00000533242 A0A1W2PPM0 123 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 GAGE10A6NGK3 116 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 RTL8CO15255 209 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 P0DMU3 169 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 FAM231AP0DMU4 169 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 FAM231CP0DMU5 169 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 DEFB131AP59861 70 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 ZNF56Q15929 161 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 Q8NAQ8 132 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 PLEKHB2Q96CS7 222 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 PRADC1Q9BSG0 188 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 TM2D2Q9BX73 214 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 DNAH17Q9UFH2 4485 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 TRBV7-3A0A075B6L6 115 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 IGHV3-73A0A0B4J1V6 119 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 TRBV27A0A0K0K1C4 114 aa5.83□□□□□ -1.48
NEDD8-207ENST00000533242 K7EP34 96 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms