RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 TRBV6-8A0A0A6YYG3 113 aa6.33□□□□□ -1.4
CTNND1-219ENST00000528621 PIK3CD-AS1Q5SR53 167 aa6.33□□□□□ -1.4
CTNND1-219ENST00000528621 ALPK3Q96L96 1907 aa6.33□□□□□ -1.4
CTNND1-219ENST00000528621 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
CTNND1-219ENST00000528621 IGKV2-24A0A0C4DH68 120 aa6.33□□□□□ -1.4
CTNND1-219ENST00000528621 UPK3BQ9BT76 320 aa6.33□□□□□ -1.4
CTNND1-219ENST00000528621 ZNF22P17026 224 aaPredicted RBP6.33□□□□□ -1.4
CTNND1-219ENST00000528621 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
CTNND1-219ENST00000528621 MUC7Q8TAX7 377 aa6.32□□□□□ -1.4
CTNND1-219ENST00000528621 CACNA1EQ15878 2313 aa6.32□□□□□ -1.4
CTNND1-219ENST00000528621 DYSFO75923 2080 aa6.32□□□□□ -1.4
CTNND1-219ENST00000528621 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
CTNND1-219ENST00000528621 LY6G6DO95868 133 aa6.32□□□□□ -1.4
CTNND1-219ENST00000528621 MRPS36P82909 103 aaKnown RBP6.32□□□□□ -1.4
CTNND1-219ENST00000528621 APC2O95996 2303 aa6.32□□□□□ -1.4
CTNND1-219ENST00000528621 TRAV10A0A0B4J240 114 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 TRBV27A0A0K0K1C4 114 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 IGLV1-40P01703 118 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 IGLV2-11P01706 119 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 CRIP1P50238 77 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 YPEL4Q96NS1 127 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 PRB2P02812 416 aaPredicted RBP6.31□□□□□ -1.4
CTNND1-219ENST00000528621 FAM110AQ9BQ89 295 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 DOCK9Q9BZ29 2069 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 C10orf142B7Z368 130 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 LINC00308Q8TCZ7 52 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
CTNND1-219ENST00000528621 SPTA1P02549 2419 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 K7ERS5 55 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 MRGPRG-AS1Q2M3A8 158 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 BPY2O14599 106 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 COX17Q14061 63 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 LINC00482Q8N8I6 264 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 ZNF706Q9Y5V0 76 aaPredicted RBP6.3□□□□□ -1.4
CTNND1-219ENST00000528621 TRIOBPQ9H2D6 2365 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 CASC2Q6XLA1 102 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 C9orf85Q96MD7 179 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 CEP250Q9BV73 2442 aa6.3□□□□□ -1.4
CTNND1-219ENST00000528621 FAM19A5Q7Z5A7 132 aaPredicted RBP6.29□□□□□ -1.4
CTNND1-219ENST00000528621 DIDO1Q9BTC0 2240 aaKnown RBP6.29□□□□□ -1.4
CTNND1-219ENST00000528621 NDUFA7O95182 113 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 C10orf99Q6UWK7 81 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 KLLNB2CW77 178 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 TP73-AS1Q9UF72 201 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 CDKN2A-AS1Q9UH64 79 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 ZNF318Q5VUA4 2279 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 TSHBP01222 138 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 HIGD2AQ9BW72 106 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 DHRS4-AS1Q9P1J3 65 aa6.29□□□□□ -1.4
CTNND1-219ENST00000528621 PROK1P58294 105 aa6.28□□□□□ -1.4
CTNND1-219ENST00000528621 CEP192Q8TEP8 1941 aa6.28□□□□□ -1.4
CTNND1-219ENST00000528621 A0A087WZ39 114 aa6.28□□□□□ -1.4
CTNND1-219ENST00000528621 CD164L2Q6UWJ8 174 aa6.28□□□□□ -1.4
CTNND1-219ENST00000528621 PTH2Q96A98 100 aa6.28□□□□□ -1.4
CTNND1-219ENST00000528621 LELP1Q5T871 98 aa6.28□□□□□ -1.4
CTNND1-219ENST00000528621 TRAV23DV6A0A075B6W5 121 aa6.28□□□□□ -1.4
CTNND1-219ENST00000528621 LRCOL1A6NCL2 159 aa6.28□□□□□ -1.4
CTNND1-219ENST00000528621 NRACQ8N912 160 aa6.28□□□□□ -1.4
CTNND1-219ENST00000528621 BBC3Q96PG8 261 aaPredicted RBP6.27□□□□□ -1.4
CTNND1-219ENST00000528621 UBE2D4Q9Y2X8 147 aa6.27□□□□□ -1.4
CTNND1-219ENST00000528621 M0R378 163 aa6.27□□□□□ -1.41
CTNND1-219ENST00000528621 CRIP2P52943 208 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-219ENST00000528621 SYCNQ0VAF6 134 aa6.27□□□□□ -1.41
CTNND1-219ENST00000528621 C18orf65Q6ZTR6 163 aa6.27□□□□□ -1.41
CTNND1-219ENST00000528621 RNASE3P12724 160 aaKnown RBP6.26□□□□□ -1.41
CTNND1-219ENST00000528621 SHANK1Q9Y566 2161 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 BRI3O95415 125 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 FSHBP01225 129 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 SLPIP03973 132 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 ZDBF2Q9HCK1 2354 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 COL5A1P20908 1838 aaPredicted RBP6.26□□□□□ -1.41
CTNND1-219ENST00000528621 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
CTNND1-219ENST00000528621 CHD3Q12873 2000 aaKnown RBP6.26□□□□□ -1.41
CTNND1-219ENST00000528621 LRP4O75096 1905 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 ZNF407Q9C0G0 2248 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 IGLV4-69A0A075B6H9 119 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 TRIAP1O43715 76 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 MAPKAPK5-AS1Q8N8E1 139 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 ZNF580Q9UK33 172 aa6.26□□□□□ -1.41
CTNND1-219ENST00000528621 LOC107984640A0A0U1RRK4 108 aa6.25□□□□□ -1.41
CTNND1-219ENST00000528621 TEX49A0A1B0GTD5 131 aa6.25□□□□□ -1.41
CTNND1-219ENST00000528621 CNFNQ9BYD5 112 aa6.25□□□□□ -1.41
CTNND1-219ENST00000528621 UQCRQO14949 82 aa6.25□□□□□ -1.41
CTNND1-219ENST00000528621 PRR9Q5T870 116 aa6.25□□□□□ -1.41
CTNND1-219ENST00000528621 SDIM1Q6ZPB5 146 aa6.25□□□□□ -1.41
CTNND1-219ENST00000528621 LINC01006Q8NI28 216 aa6.25□□□□□ -1.41
CTNND1-219ENST00000528621 LINC00474Q9P2X8 69 aa6.25□□□□□ -1.41
CTNND1-219ENST00000528621 GVINP1Q7Z2Y8 2422 aa6.25□□□□□ -1.41
CTNND1-219ENST00000528621 DCANP1Q8TF63 244 aa6.24□□□□□ -1.41
CTNND1-219ENST00000528621 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-219ENST00000528621 LINC00959A0A1B0GUT2 108 aa6.24□□□□□ -1.41
CTNND1-219ENST00000528621 ROS1P08922 2347 aa6.24□□□□□ -1.41
CTNND1-219ENST00000528621 PLA2G2AP14555 144 aa6.24□□□□□ -1.41
CTNND1-219ENST00000528621 NDUFV3P56181 108 aaKnown RBP6.24□□□□□ -1.41
CTNND1-219ENST00000528621 ENHOQ6UWT2 76 aa6.24□□□□□ -1.41
CTNND1-219ENST00000528621 AKAP6Q13023 2319 aa6.24□□□□□ -1.41
CTNND1-219ENST00000528621 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.23□□□□□ -1.41
CTNND1-219ENST00000528621 POLR2KP53803 58 aaKnown RBP6.23□□□□□ -1.41
CTNND1-219ENST00000528621 CLUHP3Q96NS8 147 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms