RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 GAGE12JA6NER3 117 aa7.53□□□□□ -1.2
TRAPPC4-204ENST00000524797 RHODO00212 210 aa7.53□□□□□ -1.2
TRAPPC4-204ENST00000524797 GAGE4Q13068 117 aa7.53□□□□□ -1.2
TRAPPC4-204ENST00000524797 GAGE5Q13069 117 aa7.53□□□□□ -1.2
TRAPPC4-204ENST00000524797 GAGE13Q4V321 117 aa7.53□□□□□ -1.2
TRAPPC4-204ENST00000524797 SFRP2Q96HF1 295 aa7.53□□□□□ -1.2
TRAPPC4-204ENST00000524797 MLST8Q9BVC4 326 aa7.53□□□□□ -1.2
TRAPPC4-204ENST00000524797 PHLDA3Q9Y5J5 127 aa7.53□□□□□ -1.2
TRAPPC4-204ENST00000524797 LINC01551Q86U37 167 aa7.52□□□□□ -1.2
TRAPPC4-204ENST00000524797 BAGE2Q86Y30 109 aa7.52□□□□□ -1.2
TRAPPC4-204ENST00000524797 A0A087WTM6 91 aa7.52□□□□□ -1.21
TRAPPC4-204ENST00000524797 UBE2V1Q13404 147 aa7.52□□□□□ -1.21
TRAPPC4-204ENST00000524797 Q9UF83 564 aa7.52□□□□□ -1.21
TRAPPC4-204ENST00000524797 PAM16Q9Y3D7 125 aa7.52□□□□□ -1.21
TRAPPC4-204ENST00000524797 DNAH5Q8TE73 4624 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 A0A087WWL8 130 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 IBA57-AS1B1ANH7 110 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 M0R381 172 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 IGHV3-30P01768 117 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 IGHV3-33P01772 117 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 IGHV3-30-3P0DP02 117 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 IGHV3-30-5P0DP03 117 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 ESDP10768 282 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 FAM74A4Q5TZK3 123 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 C11orf52Q96A22 123 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 HSPG2P98160 4391 aa7.51□□□□□ -1.21
TRAPPC4-204ENST00000524797 CCL25O15444 150 aa7.5□□□□□ -1.21
TRAPPC4-204ENST00000524797 FUSP35637 526 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRAPPC4-204ENST00000524797 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
TRAPPC4-204ENST00000524797 PDE6DO43924 150 aa7.5□□□□□ -1.21
TRAPPC4-204ENST00000524797 NUPR1O60356 82 aa7.5□□□□□ -1.21
TRAPPC4-204ENST00000524797 TRAV9-1A0A075B6T8 112 aa7.49□□□□□ -1.21
TRAPPC4-204ENST00000524797 PRR27Q6MZM9 219 aa7.49□□□□□ -1.21
TRAPPC4-204ENST00000524797 DERL1Q9BUN8 251 aa7.49□□□□□ -1.21
TRAPPC4-204ENST00000524797 KRTAP4-5Q9BYR2 181 aa7.49□□□□□ -1.21
TRAPPC4-204ENST00000524797 UQCR10Q9UDW1 63 aa7.49□□□□□ -1.21
TRAPPC4-204ENST00000524797 APOBP04114 4563 aaKnown RBP7.49□□□□□ -1.21
TRAPPC4-204ENST00000524797 SNAI2O43623 268 aa7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 OCIAD2Q56VL3 154 aa7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 Q8N3U1 123 aa7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 MAPKAPK5-AS1Q8N8E1 139 aa7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 OR10AG1Q8NH19 301 aa7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 K7ERU9 68 aa7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 CENPWQ5EE01 88 aa7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 BAGE3Q86Y29 109 aa7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 SSBP4Q9BWG4 385 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 Q9HAA7 133 aa7.48□□□□□ -1.21
TRAPPC4-204ENST00000524797 LRCOL1A6NCL2 159 aa7.47□□□□□ -1.21
TRAPPC4-204ENST00000524797 PSCAO43653 123 aa7.47□□□□□ -1.21
TRAPPC4-204ENST00000524797 SERF1AO75920 110 aa7.47□□□□□ -1.21
TRAPPC4-204ENST00000524797 IGLV2-8P01709 118 aa7.47□□□□□ -1.21
TRAPPC4-204ENST00000524797 HNRNPA3P51991 378 aaKnown RBP7.47□□□□□ -1.21
TRAPPC4-204ENST00000524797 Q0VG73 95 aa7.47□□□□□ -1.21
TRAPPC4-204ENST00000524797 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.21
TRAPPC4-204ENST00000524797 OR5AL1P0C617 328 aa7.46□□□□□ -1.21
TRAPPC4-204ENST00000524797 LAGE3Q14657 143 aa7.46□□□□□ -1.21
TRAPPC4-204ENST00000524797 SPATA45Q537H7 98 aa7.46□□□□□ -1.21
TRAPPC4-204ENST00000524797 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.21
TRAPPC4-204ENST00000524797 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.22
TRAPPC4-204ENST00000524797 MUC21A0A140T8X8 626 aa7.46□□□□□ -1.22
TRAPPC4-204ENST00000524797 UBE2D3P61077 147 aa7.46□□□□□ -1.22
TRAPPC4-204ENST00000524797 UBE2D2P62837 147 aa7.46□□□□□ -1.22
TRAPPC4-204ENST00000524797 RPL36AP83881 106 aaKnown RBP7.46□□□□□ -1.22
TRAPPC4-204ENST00000524797 Q6ZN92 141 aa7.46□□□□□ -1.22
TRAPPC4-204ENST00000524797 OR10G8Q8NGN5 311 aa7.46□□□□□ -1.22
TRAPPC4-204ENST00000524797 RPL36ALQ969Q0 106 aaKnown RBP7.46□□□□□ -1.22
TRAPPC4-204ENST00000524797 MRPL18Q9H0U6 180 aaKnown RBP7.46□□□□□ -1.22
TRAPPC4-204ENST00000524797 CTRLP40313 264 aa7.45□□□□□ -1.22
TRAPPC4-204ENST00000524797 KRTDAPP60985 99 aa7.45□□□□□ -1.22
TRAPPC4-204ENST00000524797 ZNF56Q15929 161 aa7.45□□□□□ -1.22
TRAPPC4-204ENST00000524797 SPANXN1Q5VSR9 72 aa7.45□□□□□ -1.22
TRAPPC4-204ENST00000524797 STPG4Q8N801 248 aa7.45□□□□□ -1.22
TRAPPC4-204ENST00000524797 PCLOQ9Y6V0 5065 aa7.45□□□□□ -1.22
TRAPPC4-204ENST00000524797 TRBV7-3A0A075B6L6 115 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 C19orf71A6NCJ1 209 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 GNG4P50150 75 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 LINC00310P59036 64 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 KRTAP10-1P60331 282 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 DAZ4Q86SG3 579 aaKnown RBP7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 Q8N1X5 172 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 TM2D2Q9BX73 214 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 DAZ3Q9NR90 486 aaKnown RBP7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 COX11Q9Y6N1 276 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 IGLC6P0CF74 106 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 IGLC3P0DOY3 106 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 NIT1Q86X76 327 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 NEXN-AS1Q8NBZ9 246 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 DAZAP1Q96EP5 407 aaKnown RBP7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 CST9LQ9H4G1 147 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 KIF25-AS1Q9Y6Z4 181 aa7.44□□□□□ -1.22
TRAPPC4-204ENST00000524797 COX19Q49B96 90 aa7.43□□□□□ -1.22
TRAPPC4-204ENST00000524797 NTN5Q8WTR8 489 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC4-204ENST00000524797 ABCA13Q86UQ4 5058 aa7.43□□□□□ -1.22
TRAPPC4-204ENST00000524797 TRBV20OR9-2A0A075B6H5 130 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 TRAV8-3A0A0A6YYJ7 113 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 MT-ND6P03923 174 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 GCSHP23434 173 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 Q8N814 137 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 FER1L6-AS1Q8NA97 138 aa7.42□□□□□ -1.22
TRAPPC4-204ENST00000524797 AP1S3Q96PC3 154 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms