RNA–Protein interactions for RNA: ENST00000521986.5

PTK2-238, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 2,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-238	ENST00000521986	GAGE12I	P0CL82	117 aa		6.28	□□□□□ -1.4
PTK2-238	ENST00000521986	IGHV3-30-3	P0DP02	117 aa		6.28	□□□□□ -1.4
PTK2-238	ENST00000521986	ID1	P41134	155 aa		6.28	□□□□□ -1.4
PTK2-238	ENST00000521986	GAGE4	Q13068	117 aa		6.28	□□□□□ -1.4
PTK2-238	ENST00000521986	C15orf53	Q8NAA6	179 aa		6.28	□□□□□ -1.4
PTK2-238	ENST00000521986	IGHV4-30-2	A0A087WSY4	118 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	NBPF19	A0A087WUL8	3843 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986		I3L3M4	83 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	IGLV1-40	P01703	118 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	KRTAP10-9	P60411	292 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	C10orf99	Q6UWK7	81 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	C10orf105	Q8TEF2	133 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	DCANP1	Q8TF63	244 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	CCL19	Q99731	98 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	LITAF	Q99732	161 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	PIMREG	Q9BSJ6	248 aa		6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	KMT2B	Q9UMN6	2715 aa	Predicted RBP	6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	USP9Y	O00507	2555 aa	Predicted RBP	6.27	□□□□□ -1.41
PTK2-238	ENST00000521986	TRAV8-3	A0A0A6YYJ7	113 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986		H3BMM0	161 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986		H3BUA1	57 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	AVP	P01185	164 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	ADAMTSL4-AS1	Q5T5F5	129 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	C2orf82	Q6UX34	121 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	UBE2W	Q96B02	151 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	LINC01600	Q96MT4	127 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	TIMM21	Q9BVV7	248 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986		H7C423	109 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	CFHR3	Q02985	330 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986		Q6Q795	121 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	ICOS	Q9Y6W8	199 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	PTPN13	Q12923	2485 aa		6.26	□□□□□ -1.41
PTK2-238	ENST00000521986	BRI3	O95415	125 aa		6.25	□□□□□ -1.41
PTK2-238	ENST00000521986	NPC2	P61916	151 aa		6.25	□□□□□ -1.41
PTK2-238	ENST00000521986	CEMP1	Q6PRD7	247 aa	Predicted RBP	6.25	□□□□□ -1.41
PTK2-238	ENST00000521986		Q6ZSV7	163 aa		6.25	□□□□□ -1.41
PTK2-238	ENST00000521986	CD28	P10747	220 aa		6.25	□□□□□ -1.41
PTK2-238	ENST00000521986	ATP5J2	P56134	94 aa		6.25	□□□□□ -1.41
PTK2-238	ENST00000521986	RNASE13	Q5GAN3	156 aa	Known RBP	6.25	□□□□□ -1.41
PTK2-238	ENST00000521986	NDUFA12	Q9UI09	145 aa		6.25	□□□□□ -1.41
PTK2-238	ENST00000521986	TENM4	Q6N022	2769 aa		6.25	□□□□□ -1.41
PTK2-238	ENST00000521986	IGHV1OR15-1	A0A075B7D0	117 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986		A8MZ25	164 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	COX6C	P09669	75 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	MRPS36	P82909	103 aa	Known RBP	6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	CLEC2B	Q92478	149 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	FAM104A	Q969W3	186 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	6.24	□□□□□ -1.41	2e-7	■■■■□ 20.2
PTK2-238	ENST00000521986	CSPG4	Q6UVK1	2322 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	IGHV1-58	A0A0C4DH39	117 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	MSMB	P08118	114 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	PLA2G2A	P14555	144 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	SPINK13	Q1W4C9	94 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	DUX3	Q96PT4	197 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	ABCA12	Q86UK0	2595 aa		6.24	□□□□□ -1.41
PTK2-238	ENST00000521986	IGHV3-73	A0A0B4J1V6	119 aa		6.23	□□□□□ -1.41
PTK2-238	ENST00000521986		K7EMT4	169 aa		6.23	□□□□□ -1.41
PTK2-238	ENST00000521986	IGHV4-59	P01825	116 aa		6.23	□□□□□ -1.41
PTK2-238	ENST00000521986	SPANXD	Q9BXN6	97 aa		6.23	□□□□□ -1.41
PTK2-238	ENST00000521986	SPANXC	Q9NY87	97 aa		6.23	□□□□□ -1.41
PTK2-238	ENST00000521986	PYGO1	Q9Y3Y4	419 aa		6.23	□□□□□ -1.41
PTK2-238	ENST00000521986		H3BT86	120 aa		6.23	□□□□□ -1.41
PTK2-238	ENST00000521986	MIA	Q16674	131 aa		6.23	□□□□□ -1.41
PTK2-238	ENST00000521986	HTN1	P15515	57 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	PSMB8	P28062	276 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	PROK1	P58294	105 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	SNRPD3	P62318	126 aa	Known RBP	6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	VSIG2	Q96IQ7	327 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	DOPEY2	Q9Y3R5	2298 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	HELZ2	Q9BYK8	2649 aa	Known RBP	6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	ZAN	Q9Y493	2812 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	LST1	O00453	97 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	TMEM61	Q8N0U2	210 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	MAPK1IP1L	Q8NDC0	245 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986	CREBBP	Q92793	2442 aa		6.22	□□□□□ -1.41
PTK2-238	ENST00000521986		J3QKU1	62 aa		6.21	□□□□□ -1.42
PTK2-238	ENST00000521986	DAND5	Q8N907	189 aa		6.21	□□□□□ -1.42
PTK2-238	ENST00000521986	DUX5	Q96PT3	197 aa		6.21	□□□□□ -1.42
PTK2-238	ENST00000521986		Q9UF83	564 aa		6.21	□□□□□ -1.42
PTK2-238	ENST00000521986	SORL1	Q92673	2214 aa		6.21	□□□□□ -1.42
PTK2-238	ENST00000521986	TRGV11	A0A075B6L2	103 aa		6.21	□□□□□ -1.42
PTK2-238	ENST00000521986	DEFB112	Q30KQ8	113 aa		6.21	□□□□□ -1.42
PTK2-238	ENST00000521986	SMIM20	Q8N5G0	67 aa		6.21	□□□□□ -1.42
PTK2-238	ENST00000521986	PRRC2A	P48634	2157 aa	Known RBP	6.21	□□□□□ -1.42
PTK2-238	ENST00000521986	FAM240A	A0A1B0GVK7	77 aa		6.2	□□□□□ -1.42
PTK2-238	ENST00000521986	TINCR	A0A1B0GVN0	87 aa		6.2	□□□□□ -1.42
PTK2-238	ENST00000521986		K7EQG2	157 aa		6.2	□□□□□ -1.42
PTK2-238	ENST00000521986	SYNJ2BP	P57105	145 aa		6.2	□□□□□ -1.42
PTK2-238	ENST00000521986	MRPL23	Q16540	153 aa	Known RBP	6.2	□□□□□ -1.42
PTK2-238	ENST00000521986	CHCHD5	Q9BSY4	110 aa		6.2	□□□□□ -1.42
PTK2-238	ENST00000521986	TNFRSF18	Q9Y5U5	241 aa		6.2	□□□□□ -1.42
PTK2-238	ENST00000521986	DEFB121	Q5J5C9	76 aa		6.2	□□□□□ -1.42
PTK2-238	ENST00000521986	MEIG1	Q5JSS6	88 aa		6.2	□□□□□ -1.42
PTK2-238	ENST00000521986	NAV2	Q8IVL1	2488 aa		6.19	□□□□□ -1.42
PTK2-238	ENST00000521986	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.19	□□□□□ -1.42
PTK2-238	ENST00000521986	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.19	□□□□□ -1.42
PTK2-238	ENST00000521986	KNCN	A6PVL3	124 aa		6.19	□□□□□ -1.42
PTK2-238	ENST00000521986	PRM2	P04554	102 aa		6.19	□□□□□ -1.42
PTK2-238	ENST00000521986	RBMY1A1	P0DJD3	496 aa	Known RBP	6.19	□□□□□ -1.42
PTK2-238	ENST00000521986	RBMY1C	P0DJD4	496 aa		6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms