RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PRDM15P57071 1507 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 UGGT2Q9NYU1 1516 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 RGPD1P0DJD0 1748 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 NWD2Q9ULI1 1742 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 ABCC5O15440 1437 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 BLMP54132 1417 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 SPAG17Q6Q759 2223 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 KANTRA0A1W2PQU2 76 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 NAP1L6A6NFF2 107 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 C5orf67F2Z3F1 127 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 DNAL4O96015 105 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 IGLC2P0DOY2 106 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 IGLC3P0DOY3 106 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 GNGT1P63211 74 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 COMMD6Q7Z4G1 85 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 Q8N8P6 123 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 DYNLRB2Q8TF09 96 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 DSCR8Q96T75 97 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 TRGV9Q99603 122 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 CST11Q9H112 138 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 MRPL35Q9NZE8 188 aaKnown RBP1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 A0A1B0GUL6 1792 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 PREX2Q70Z35 1606 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 NLRP1Q9C000 1473 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 NRXN1Q9ULB1 1477 aa1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 AFDNP55196 1824 aaKnown RBP1.61□□□□□ -2.15
HMGB1P46-201ENST00000520062 MGAMO43451 1857 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 ABCA8O94911 1581 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 DIP2BQ9P265 1576 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 KDM3BQ7LBC6 1761 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 MED12Q93074 2177 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 A6NIN4 97 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 BCE1O60756 84 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 CFDP00746 253 aaPredicted RBP1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 CCKP06307 115 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 PIRTP0C851 137 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 FAUP35544 74 aaKnown RBP1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 PMCHL1Q16048 86 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 HEPN1Q6WQI6 88 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 SERP2Q8N6R1 65 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 C22orf24Q9Y442 160 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 PRRC2BQ5JSZ5 2229 aaKnown RBP1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 ABCC1P33527 1531 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 LMTK2Q8IWU2 1503 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 ITSN1Q15811 1721 aa1.6□□□□□ -2.15
HMGB1P46-201ENST00000520062 SETBP1Q9Y6X0 1596 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 ARFGEF2Q9Y6D5 1785 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 LAMA4Q16363 1823 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 TET3O43151 1660 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 FANCD2Q9BXW9 1451 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 MLH3Q9UHC1 1453 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 CACNA1BQ00975 2339 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 A0A087WWC5 75 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 A0A087WXM4 84 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 A0A1W2PPM0 123 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 ACYP1P07311 99 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 SMIM11AP58511 58 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 LINC00269Q8N2A0 174 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 TMEM141Q96I45 108 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 C20orf78Q9BR46 151 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 CYP4F30PQ9H0H9 118 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 SPCS1Q9Y6A9 102 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 ANKRD36A6QL64 1941 aa1.59□□□□□ -2.15
HMGB1P46-201ENST00000520062 MED13Q9UHV7 2174 aa1.59□□□□□ -2.16
HMGB1P46-201ENST00000520062 EPRSP07814 1512 aaKnown RBP1.59□□□□□ -2.16
HMGB1P46-201ENST00000520062 CUX1P39880 1505 aa1.59□□□□□ -2.16
HMGB1P46-201ENST00000520062 KCPQ6ZWJ8 1503 aa1.59□□□□□ -2.16
HMGB1P46-201ENST00000520062 TET1Q8NFU7 2136 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 ATP10BO94823 1461 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 LRRC9Q6ZRR7 1453 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 EFCAB5A4FU69 1503 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 TRAV17A0A0B4J275 112 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 hADV29S1A0JD25 119 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 UBE2G1P62253 170 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 MIR22HGQ0VDD5 57 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 RHOHQ15669 191 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 ETDBQ3ZM63 59 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 BVES-AS1Q5T3Y7 98 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 RPL7L1Q6DKI1 246 aaKnown RBP1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 SLC48A1Q6P1K1 146 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 LINC01600Q96MT4 127 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 TIAM1Q13009 1591 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 IQGAP3Q86VI3 1631 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 MYO3AQ8NEV4 1616 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 CFAP43Q8NDM7 1665 aa1.58□□□□□ -2.16
HMGB1P46-201ENST00000520062 UBR1Q8IWV7 1749 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 IQSEC2Q5JU85 1478 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 DUOX2Q9NRD8 1548 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 LOC107984156A0A0G2JMH3 177 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 SYS1-DBNDD2H3BUS1 97 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 IGHV3-33P01772 117 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 GNG11P61952 73 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 SNRPFP62306 86 aaKnown RBP1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 INSL4Q14641 139 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 PSMG4Q5JS54 123 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 CASC2Q6XLA1 102 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 NDUFA11Q86Y39 141 aa1.57□□□□□ -2.16
HMGB1P46-201ENST00000520062 ARL17AQ8IVW1 177 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms